RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 CALML3P27482 149 aa13.73□□□□□ -0.21
HERC3-207ENST00000452979 RPS6P62753 249 aaKnown RBP13.73□□□□□ -0.21
HERC3-207ENST00000452979 PDE4DQ08499 809 aa13.73□□□□□ -0.21
HERC3-207ENST00000452979 RETREG2Q8NC44 543 aa13.73□□□□□ -0.21
HERC3-207ENST00000452979 GPCPD1Q9NPB8 672 aa13.73□□□□□ -0.21
HERC3-207ENST00000452979 BDP1A6H8Y1 2624 aa13.73□□□□□ -0.21
HERC3-207ENST00000452979 PTPRSQ13332 1948 aa13.72□□□□□ -0.21
HERC3-207ENST00000452979 ZMYM6O95789 1325 aa13.72□□□□□ -0.21
HERC3-207ENST00000452979 FRMPD2Q68DX3 1309 aaPredicted RBP13.72□□□□□ -0.21
HERC3-207ENST00000452979 RAD50Q92878 1312 aa13.72□□□□□ -0.21
HERC3-207ENST00000452979 B4DLN1 442 aa13.72□□□□□ -0.21
HERC3-207ENST00000452979 RFXAPO00287 272 aa13.72□□□□□ -0.21
HERC3-207ENST00000452979 MRPL12P52815 198 aaKnown RBP13.72□□□□□ -0.21
HERC3-207ENST00000452979 TFF2Q03403 129 aa13.72□□□□□ -0.21
HERC3-207ENST00000452979 ZNF543Q08ER8 600 aa13.72□□□□□ -0.21
HERC3-207ENST00000452979 PPP2R5BQ15173 497 aa13.72□□□□□ -0.21
HERC3-207ENST00000452979 MCMDC2Q4G0Z9 681 aa13.72□□□□□ -0.21
HERC3-207ENST00000452979 FAM47CQ5HY64 1035 aa13.72□□□□□ -0.21
HERC3-207ENST00000452979 HERC6Q8IVU3 1022 aa13.72□□□□□ -0.21
HERC3-207ENST00000452979 EXOC6Q8TAG9 804 aa13.72□□□□□ -0.21
HERC3-207ENST00000452979 TRIP12Q14669 1992 aaPredicted RBP13.72□□□□□ -0.21
HERC3-207ENST00000452979 GTPBP6O43824 516 aaPredicted RBP13.71□□□□□ -0.21
HERC3-207ENST00000452979 BAIAP3O94812 1187 aa13.71□□□□□ -0.21
HERC3-207ENST00000452979 TXNP10599 105 aaKnown RBP13.71□□□□□ -0.21
HERC3-207ENST00000452979 PCP11498 1178 aaKnown RBP13.71□□□□□ -0.21
HERC3-207ENST00000452979 TAP1Q03518 808 aa13.71□□□□□ -0.21
HERC3-207ENST00000452979 BFSP2Q13515 415 aa13.71□□□□□ -0.21
HERC3-207ENST00000452979 CCDC62Q6P9F0 684 aa13.71□□□□□ -0.21
HERC3-207ENST00000452979 SESTD1Q86VW0 696 aa13.71□□□□□ -0.21
HERC3-207ENST00000452979 COPS5Q92905 334 aa13.71□□□□□ -0.21
HERC3-207ENST00000452979 NECAB3Q96P71 396 aaPredicted RBP13.71□□□□□ -0.21
HERC3-207ENST00000452979 RAPGEFL1Q9UHV5 662 aa13.71□□□□□ -0.21
HERC3-207ENST00000452979 COG5Q9UP83 839 aa13.71□□□□□ -0.21
HERC3-207ENST00000452979 TET1Q8NFU7 2136 aa13.7□□□□□ -0.22
HERC3-207ENST00000452979 KIAA1217Q5T5P2 1943 aa13.7□□□□□ -0.22
HERC3-207ENST00000452979 EPOPA6NHQ4 379 aa13.7□□□□□ -0.22
HERC3-207ENST00000452979 KIF28PB7ZC32 967 aa13.7□□□□□ -0.22
HERC3-207ENST00000452979 HSPD1P10809 573 aaKnown RBP13.7□□□□□ -0.22
HERC3-207ENST00000452979 KCNQ1P51787 676 aa13.7□□□□□ -0.22
HERC3-207ENST00000452979 RRP12Q5JTH9 1297 aaKnown RBP13.7□□□□□ -0.22
HERC3-207ENST00000452979 MICALL1Q8N3F8 863 aa13.7□□□□□ -0.22
HERC3-207ENST00000452979 AFAP1L1Q8TED9 768 aa13.7□□□□□ -0.22
HERC3-207ENST00000452979 FAM227BQ96M60 508 aa13.7□□□□□ -0.22
HERC3-207ENST00000452979 CTAGE1Q96RT6 745 aa13.7□□□□□ -0.22
HERC3-207ENST00000452979 C1QTNF1Q9BXJ1 281 aa13.7□□□□□ -0.22
HERC3-207ENST00000452979 FTOQ9C0B1 505 aaKnown RBP eCLIP13.7□□□□□ -0.22
HERC3-207ENST00000452979 CERS4Q9HA82 394 aa13.7□□□□□ -0.22
HERC3-207ENST00000452979 TOMM22Q9NS69 142 aa13.7□□□□□ -0.22
HERC3-207ENST00000452979 NCOR1O75376 2440 aa13.7□□□□□ -0.22
HERC3-207ENST00000452979 A0A0D9SFI3 127 aa13.69□□□□□ -0.22
HERC3-207ENST00000452979 TLL1O43897 1013 aa13.69□□□□□ -0.22
HERC3-207ENST00000452979 ARHGEF15O94989 841 aa13.69□□□□□ -0.22
HERC3-207ENST00000452979 ARIH2O95376 493 aa13.69□□□□□ -0.22
HERC3-207ENST00000452979 PDE1AP54750 535 aa13.69□□□□□ -0.22
HERC3-207ENST00000452979 GPNMBQ14956 572 aa13.69□□□□□ -0.22
HERC3-207ENST00000452979 PTGISQ16647 500 aa13.69□□□□□ -0.22
HERC3-207ENST00000452979 GPATCH4Q5T3I0 446 aaKnown RBP13.69□□□□□ -0.22
HERC3-207ENST00000452979 CAGE1Q8TC20 777 aa13.69□□□□□ -0.22
HERC3-207ENST00000452979 PPP1R13LQ8WUF5 828 aa13.69□□□□□ -0.22
HERC3-207ENST00000452979 PRRC2BQ5JSZ5 2229 aaKnown RBP13.69□□□□□ -0.22
HERC3-207ENST00000452979 PARNO95453 639 aaKnown RBP13.68□□□□□ -0.22
HERC3-207ENST00000452979 NT5C2P49902 561 aa13.68□□□□□ -0.22
HERC3-207ENST00000452979 ARHGAP1Q07960 439 aa13.68□□□□□ -0.22
HERC3-207ENST00000452979 RBL2Q08999 1139 aa13.68□□□□□ -0.22
HERC3-207ENST00000452979 SKIV2LQ15477 1246 aaKnown RBP13.68□□□□□ -0.22
HERC3-207ENST00000452979 ANKRD45Q5TZF3 282 aa13.68□□□□□ -0.22
HERC3-207ENST00000452979 MFSD6Q6ZSS7 791 aa13.68□□□□□ -0.22
HERC3-207ENST00000452979 DGKHQ86XP1 1220 aa13.68□□□□□ -0.22
HERC3-207ENST00000452979 CCDC155Q8N6L0 562 aa13.68□□□□□ -0.22
HERC3-207ENST00000452979 ARNTL2Q8WYA1 636 aa13.68□□□□□ -0.22
HERC3-207ENST00000452979 KAT2BQ92831 832 aa13.68□□□□□ -0.22
HERC3-207ENST00000452979 LMCD1Q9NZU5 365 aa13.68□□□□□ -0.22
HERC3-207ENST00000452979 NOD1Q9Y239 953 aa13.68□□□□□ -0.22
HERC3-207ENST00000452979 LPXNO60711 386 aa13.67□□□□□ -0.22
HERC3-207ENST00000452979 GH1P01241 217 aa13.67□□□□□ -0.22
HERC3-207ENST00000452979 CXCL10P02778 98 aa13.67□□□□□ -0.22
HERC3-207ENST00000452979 MMP3P08254 477 aa13.67□□□□□ -0.22
HERC3-207ENST00000452979 CASTP20810 708 aaKnown RBP13.67□□□□□ -0.22
HERC3-207ENST00000452979 PLA2G5P39877 138 aa13.67□□□□□ -0.22
HERC3-207ENST00000452979 GRB10Q13322 594 aa13.67□□□□□ -0.22
HERC3-207ENST00000452979 KRT40Q6A162 431 aa13.67□□□□□ -0.22
HERC3-207ENST00000452979 GDF6Q6KF10 455 aaPredicted RBP13.67□□□□□ -0.22
HERC3-207ENST00000452979 AFG1LQ8WV93 481 aa13.67□□□□□ -0.22
HERC3-207ENST00000452979 TBC1D5Q92609 795 aa13.67□□□□□ -0.22
HERC3-207ENST00000452979 ANKS1AQ92625 1134 aa13.67□□□□□ -0.22
HERC3-207ENST00000452979 TAAR1Q96RJ0 339 aa13.67□□□□□ -0.22
HERC3-207ENST00000452979 IWS1Q96ST2 819 aa13.67□□□□□ -0.22
HERC3-207ENST00000452979 ABCB11O95342 1321 aa13.66□□□□□ -0.22
HERC3-207ENST00000452979 COL4A4P53420 1690 aaPredicted RBP13.66□□□□□ -0.22
HERC3-207ENST00000452979 GOLGA8HP0CJ92 632 aa13.66□□□□□ -0.22
HERC3-207ENST00000452979 SELPP16109 830 aa13.66□□□□□ -0.22
HERC3-207ENST00000452979 KCNJ6P48051 423 aa13.66□□□□□ -0.22
HERC3-207ENST00000452979 HAND2P61296 217 aa13.66□□□□□ -0.22
HERC3-207ENST00000452979 WDR5P61964 334 aaKnown RBP13.66□□□□□ -0.22
HERC3-207ENST00000452979 NMIQ13287 307 aaPredicted RBP13.66□□□□□ -0.22
HERC3-207ENST00000452979 LY6KQ17RY6 165 aa13.66□□□□□ -0.22
HERC3-207ENST00000452979 USH1GQ495M9 461 aa13.66□□□□□ -0.22
HERC3-207ENST00000452979 ZNF589Q86UQ0 364 aaPredicted RBP13.66□□□□□ -0.22
HERC3-207ENST00000452979 TBC1D10CQ8IV04 446 aa13.66□□□□□ -0.22
HERC3-207ENST00000452979 SYTL5Q8TDW5 730 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms