RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 CRBNQ96SW2 442 aa12.79□□□□□ -0.36
USP1-204ENST00000452143 GPCPD1Q9NPB8 672 aa12.79□□□□□ -0.36
USP1-204ENST00000452143 CXXC1Q9P0U4 656 aaPredicted RBP12.79□□□□□ -0.36
USP1-204ENST00000452143 TNKSO95271 1327 aa12.79□□□□□ -0.36
USP1-204ENST00000452143 SCN5AQ14524 2016 aa12.79□□□□□ -0.36
USP1-204ENST00000452143 CALML3P27482 149 aa12.78□□□□□ -0.36
USP1-204ENST00000452143 HAND2P61296 217 aa12.78□□□□□ -0.36
USP1-204ENST00000452143 PDE4DQ08499 809 aa12.78□□□□□ -0.36
USP1-204ENST00000452143 OTOP2Q7RTS6 562 aa12.78□□□□□ -0.36
USP1-204ENST00000452143 OR6J1Q8NGC5 347 aa12.78□□□□□ -0.36
USP1-204ENST00000452143 MTG1Q9BT17 334 aaPredicted RBP12.78□□□□□ -0.36
USP1-204ENST00000452143 PRDM12Q9H4Q4 367 aa12.78□□□□□ -0.36
USP1-204ENST00000452143 SLC28A3Q9HAS3 691 aa12.78□□□□□ -0.36
USP1-204ENST00000452143 GPHNQ9NQX3 736 aaPredicted RBP12.78□□□□□ -0.36
USP1-204ENST00000452143 REV3LO60673 3130 aa12.77□□□□□ -0.36
USP1-204ENST00000452143 A6NJR5 290 aa12.77□□□□□ -0.37
USP1-204ENST00000452143 TRIM6-TRIM34B2RNG4 842 aa12.77□□□□□ -0.37
USP1-204ENST00000452143 KPNA6O60684 536 aa12.77□□□□□ -0.37
USP1-204ENST00000452143 RFC2P35250 354 aa12.77□□□□□ -0.37
USP1-204ENST00000452143 PTPN11Q06124 597 aaPredicted RBP12.77□□□□□ -0.37
USP1-204ENST00000452143 CCDC178Q5BJE1 867 aa12.77□□□□□ -0.37
USP1-204ENST00000452143 NFRKBQ6P4R8 1299 aa12.77□□□□□ -0.37
USP1-204ENST00000452143 DGKHQ86XP1 1220 aa12.77□□□□□ -0.37
USP1-204ENST00000452143 TBC1D10CQ8IV04 446 aa12.77□□□□□ -0.37
USP1-204ENST00000452143 RGS22Q8NE09 1264 aa12.77□□□□□ -0.37
USP1-204ENST00000452143 ATXN2LQ8WWM7 1075 aaKnown RBP12.77□□□□□ -0.37
USP1-204ENST00000452143 TRMT13Q9NUP7 481 aaKnown RBP12.77□□□□□ -0.37
USP1-204ENST00000452143 THEGQ9P2T0 379 aa12.77□□□□□ -0.37
USP1-204ENST00000452143 SLC4A7Q9Y6M7 1214 aa12.77□□□□□ -0.37
USP1-204ENST00000452143 NEDD4P46934 1319 aa12.77□□□□□ -0.37
USP1-204ENST00000452143 XIRP2A4UGR9 3374 aa12.77□□□□□ -0.37
USP1-204ENST00000452143 MYL3P08590 195 aa12.76□□□□□ -0.37
USP1-204ENST00000452143 PPP2R2DQ66LE6 453 aa12.76□□□□□ -0.37
USP1-204ENST00000452143 IQCA1Q86XH1 822 aa12.76□□□□□ -0.37
USP1-204ENST00000452143 SMC5Q8IY18 1101 aa12.76□□□□□ -0.37
USP1-204ENST00000452143 RILPL2Q969X0 211 aa12.76□□□□□ -0.37
USP1-204ENST00000452143 SCLYQ96I15 445 aa12.76□□□□□ -0.37
USP1-204ENST00000452143 LNPKQ9C0E8 428 aa12.76□□□□□ -0.37
USP1-204ENST00000452143 NKX2-4Q9H2Z4 354 aa12.76□□□□□ -0.37
USP1-204ENST00000452143 OSBPL3Q9H4L5 887 aa12.76□□□□□ -0.37
USP1-204ENST00000452143 YBX2Q9Y2T7 364 aaKnown RBP12.76□□□□□ -0.37
USP1-204ENST00000452143 PCDHA11Q9Y5I1 949 aa12.76□□□□□ -0.37
USP1-204ENST00000452143 ZBBXA8MT70 800 aa12.75□□□□□ -0.37
USP1-204ENST00000452143 ZNF213O14771 459 aa12.75□□□□□ -0.37
USP1-204ENST00000452143 ABCB11O95342 1321 aa12.75□□□□□ -0.37
USP1-204ENST00000452143 TXNP10599 105 aaKnown RBP12.75□□□□□ -0.37
USP1-204ENST00000452143 CYP2C9P11712 490 aa12.75□□□□□ -0.37
USP1-204ENST00000452143 ACTN1P12814 892 aa12.75□□□□□ -0.37
USP1-204ENST00000452143 ATP2A2P16615 1042 aaKnown RBP12.75□□□□□ -0.37
USP1-204ENST00000452143 SDSP20132 328 aa12.75□□□□□ -0.37
USP1-204ENST00000452143 ADGRE1Q14246 886 aa12.75□□□□□ -0.37
USP1-204ENST00000452143 TTLL4Q14679 1199 aa12.75□□□□□ -0.37
USP1-204ENST00000452143 ASPRV1Q53RT3 343 aa12.75□□□□□ -0.37
USP1-204ENST00000452143 PNMA1Q8ND90 353 aa12.75□□□□□ -0.37
USP1-204ENST00000452143 VWCEQ96DN2 955 aa12.75□□□□□ -0.37
USP1-204ENST00000452143 PRDM6Q9NQX0 595 aa12.75□□□□□ -0.37
USP1-204ENST00000452143 POTEMA6NI47 508 aa12.74□□□□□ -0.37
USP1-204ENST00000452143 HIP1O00291 1037 aa12.74□□□□□ -0.37
USP1-204ENST00000452143 CDC37Q16543 378 aaPredicted RBP12.74□□□□□ -0.37
USP1-204ENST00000452143 NBPF20Q3BBV1 942 aa12.74□□□□□ -0.37
USP1-204ENST00000452143 USH1GQ495M9 461 aa12.74□□□□□ -0.37
USP1-204ENST00000452143 FAM47CQ5HY64 1035 aa12.74□□□□□ -0.37
USP1-204ENST00000452143 SLC9A7Q96T83 725 aa12.74□□□□□ -0.37
USP1-204ENST00000452143 KAT14Q9H8E8 782 aa12.74□□□□□ -0.37
USP1-204ENST00000452143 TRIP12Q14669 1992 aaPredicted RBP12.74□□□□□ -0.37
USP1-204ENST00000452143 TET1Q8NFU7 2136 aa12.73□□□□□ -0.37
USP1-204ENST00000452143 PTPRSQ13332 1948 aa12.73□□□□□ -0.37
USP1-204ENST00000452143 KDM4AO75164 1064 aa12.73□□□□□ -0.37
USP1-204ENST00000452143 IQCF3P0C7M6 154 aa12.73□□□□□ -0.37
USP1-204ENST00000452143 GOLGA8HP0CJ92 632 aa12.73□□□□□ -0.37
USP1-204ENST00000452143 RABGGTBP53611 331 aa12.73□□□□□ -0.37
USP1-204ENST00000452143 BFSP2Q13515 415 aa12.73□□□□□ -0.37
USP1-204ENST00000452143 SESTD1Q86VW0 696 aa12.73□□□□□ -0.37
USP1-204ENST00000452143 CHD1LQ86WJ1 897 aa12.73□□□□□ -0.37
USP1-204ENST00000452143 MCF2L2Q86YR7 1114 aa12.73□□□□□ -0.37
USP1-204ENST00000452143 CCDC155Q8N6L0 562 aa12.73□□□□□ -0.37
USP1-204ENST00000452143 PHOSPHO2Q8TCD6 241 aa12.73□□□□□ -0.37
USP1-204ENST00000452143 NSUN6Q8TEA1 469 aaKnown RBP12.73□□□□□ -0.37
USP1-204ENST00000452143 PPM1EQ8WY54 764 aa12.73□□□□□ -0.37
USP1-204ENST00000452143 ANKS1AQ92625 1134 aa12.73□□□□□ -0.37
USP1-204ENST00000452143 ASB2Q96Q27 587 aa12.73□□□□□ -0.37
USP1-204ENST00000452143 IWS1Q96ST2 819 aa12.73□□□□□ -0.37
USP1-204ENST00000452143 ZSCAN10Q96SZ4 725 aaPredicted RBP12.73□□□□□ -0.37
USP1-204ENST00000452143 ZKSCAN3Q9BRR0 538 aa12.73□□□□□ -0.37
USP1-204ENST00000452143 DSCC1Q9BVC3 393 aa12.73□□□□□ -0.37
USP1-204ENST00000452143 TSPYL2Q9H2G4 693 aaPredicted RBP12.73□□□□□ -0.37
USP1-204ENST00000452143 RWDD1Q9H446 243 aaPredicted RBP12.73□□□□□ -0.37
USP1-204ENST00000452143 DIAPH3Q9NSV4 1193 aa12.73□□□□□ -0.37
USP1-204ENST00000452143 NOD1Q9Y239 953 aa12.73□□□□□ -0.37
USP1-204ENST00000452143 PRRC2BQ5JSZ5 2229 aaKnown RBP12.73□□□□□ -0.37
USP1-204ENST00000452143 TNFRSF10AO00220 468 aa12.72□□□□□ -0.37
USP1-204ENST00000452143 BAIAP3O94812 1187 aa12.72□□□□□ -0.37
USP1-204ENST00000452143 ARIH2O95376 493 aa12.72□□□□□ -0.37
USP1-204ENST00000452143 GH1P01241 217 aa12.72□□□□□ -0.37
USP1-204ENST00000452143 MMP3P08254 477 aa12.72□□□□□ -0.37
USP1-204ENST00000452143 IGFBP4P22692 258 aa12.72□□□□□ -0.37
USP1-204ENST00000452143 MRPS5P82675 430 aaKnown RBP12.72□□□□□ -0.37
USP1-204ENST00000452143 IMMTQ16891 758 aaKnown RBP12.72□□□□□ -0.37
USP1-204ENST00000452143 TMEM67Q5HYA8 995 aa12.72□□□□□ -0.37
USP1-204ENST00000452143 CCDC62Q6P9F0 684 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms