RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 SH3TC2Q8TF17 1288 aa27.59■■■□□ 2.01
CPSF4-207ENST00000451876 TINF2Q9BSI4 451 aa27.59■■■□□ 2.01
CPSF4-207ENST00000451876 PXMP2Q9NR77 195 aa27.59■■■□□ 2.01
CPSF4-207ENST00000451876 PCDHA4Q9UN74 947 aa27.59■■■□□ 2.01
CPSF4-207ENST00000451876 MYH7BA7E2Y1 1941 aa27.58■■■□□ 2.01
CPSF4-207ENST00000451876 EIF2AK2P19525 551 aaKnown RBP27.58■■■□□ 2.01
CPSF4-207ENST00000451876 UBXN2AP68543 259 aa27.58■■■□□ 2.01
CPSF4-207ENST00000451876 KRT40Q6A162 431 aa27.58■■■□□ 2.01
CPSF4-207ENST00000451876 MAMDC4Q6UXC1 1216 aa27.58■■■□□ 2.01
CPSF4-207ENST00000451876 FAM177A1Q8N128 213 aaPredicted RBP27.58■■■□□ 2.01
CPSF4-207ENST00000451876 REXO1Q8N1G1 1221 aaKnown RBP27.58■■■□□ 2.01
CPSF4-207ENST00000451876 C8orf76Q96K31 380 aa27.58■■■□□ 2.01
CPSF4-207ENST00000451876 GLT8D2Q9H1C3 349 aa27.58■■■□□ 2.01
CPSF4-207ENST00000451876 JAKMIP3Q5VZ66 844 aa27.57■■■□□ 2
CPSF4-207ENST00000451876 DAGLBQ8NCG7 672 aa27.57■■■□□ 2
CPSF4-207ENST00000451876 NSUN6Q8TEA1 469 aaKnown RBP27.57■■■□□ 2
CPSF4-207ENST00000451876 MCOLN1Q9GZU1 580 aa27.57■■■□□ 2
CPSF4-207ENST00000451876 FRMPD4Q14CM0 1322 aa27.57■■■□□ 2
CPSF4-207ENST00000451876 M0R2N6 131 aa27.56■■■□□ 2
CPSF4-207ENST00000451876 ARHGEF16Q5VV41 709 aa27.56■■■□□ 2
CPSF4-207ENST00000451876 ARMCX2Q7L311 632 aa27.56■■■□□ 2
CPSF4-207ENST00000451876 BLIDQ8IZY5 108 aa27.56■■■□□ 2
CPSF4-207ENST00000451876 IL31RAQ8NI17 732 aa27.56■■■□□ 2
CPSF4-207ENST00000451876 OXER1Q8TDS5 423 aa27.56■■■□□ 2
CPSF4-207ENST00000451876 PCDHA6Q9UN73 950 aa27.56■■■□□ 2
CPSF4-207ENST00000451876 PCDHA8Q9Y5H6 950 aa27.56■■■□□ 2
CPSF4-207ENST00000451876 KIAA1217Q5T5P2 1943 aa27.56■■■□□ 2
CPSF4-207ENST00000451876 RPTORQ8N122 1335 aa27.56■■■□□ 2
CPSF4-207ENST00000451876 SPDYE3A6NKU9 549 aa27.56■■■□□ 2
CPSF4-207ENST00000451876 MMP1P03956 469 aa27.56■■■□□ 2
CPSF4-207ENST00000451876 HMGCRP04035 888 aa27.56■■■□□ 2
CPSF4-207ENST00000451876 EDNRBP24530 442 aa27.56■■■□□ 2
CPSF4-207ENST00000451876 TRIM29Q14134 588 aa27.56■■■□□ 2
CPSF4-207ENST00000451876 SLC9C1Q4G0N8 1177 aa27.56■■■□□ 2
CPSF4-207ENST00000451876 COL13A1Q5TAT6 717 aaPredicted RBP27.56■■■□□ 2
CPSF4-207ENST00000451876 TEX2Q8IWB9 1127 aa27.56■■■□□ 2
CPSF4-207ENST00000451876 TRMT44Q8IYL2 757 aaKnown RBP27.56■■■□□ 2
CPSF4-207ENST00000451876 BICD2Q8TD16 824 aa27.56■■■□□ 2
CPSF4-207ENST00000451876 PDCD2LQ9BRP1 358 aa27.56■■■□□ 2
CPSF4-207ENST00000451876 SYNGAP1Q96PV0 1343 aa27.55■■■□□ 2
CPSF4-207ENST00000451876 SNAI1O95863 264 aaPredicted RBP27.55■■■□□ 2
CPSF4-207ENST00000451876 PGM5Q15124 567 aa27.55■■■□□ 2
CPSF4-207ENST00000451876 GALNT17Q6IS24 598 aa27.55■■■□□ 2
CPSF4-207ENST00000451876 SPRYD3Q8NCJ5 442 aa27.55■■■□□ 2
CPSF4-207ENST00000451876 FBXO18Q8NFZ0 1043 aa27.55■■■□□ 2
CPSF4-207ENST00000451876 ANO3Q9BYT9 981 aa27.55■■■□□ 2
CPSF4-207ENST00000451876 ASB14A6NK59 587 aa27.54■■■□□ 2
CPSF4-207ENST00000451876 INHAP05111 366 aa27.54■■■□□ 2
CPSF4-207ENST00000451876 AP3B2Q13367 1082 aa27.54■■■□□ 2
CPSF4-207ENST00000451876 MSL3Q8N5Y2 521 aaKnown RBP27.54■■■□□ 2
CPSF4-207ENST00000451876 MORC4Q8TE76 937 aa27.54■■■□□ 2
CPSF4-207ENST00000451876 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.54■■■□□ 2
CPSF4-207ENST00000451876 KIF3AQ9Y496 699 aa27.54■■■□□ 2
CPSF4-207ENST00000451876 HSP90AA1P07900 732 aaKnown RBP27.53■■■□□ 2
CPSF4-207ENST00000451876 TSHZ2Q9NRE2 1034 aa27.53■■■□□ 2
CPSF4-207ENST00000451876 NR3C2P08235 984 aa27.52■■■□□ 2
CPSF4-207ENST00000451876 PRKAR2AP13861 404 aaKnown RBP27.52■■■□□ 2
CPSF4-207ENST00000451876 CACNB2Q08289 660 aaPredicted RBP27.52■■■□□ 2
CPSF4-207ENST00000451876 NR5A1Q13285 461 aa27.52■■■□□ 2
CPSF4-207ENST00000451876 PRAMEF19Q5SWL8 479 aa27.52■■■□□ 2
CPSF4-207ENST00000451876 EEPD1Q7L9B9 569 aa27.52■■■□□ 2
CPSF4-207ENST00000451876 ZFP91Q96JP5 570 aaPredicted RBP27.52■■■□□ 2
CPSF4-207ENST00000451876 LOC102724159A0A0B4J2E5 919 aa27.52■■■□□ 2
CPSF4-207ENST00000451876 FOSP01100 380 aaPredicted RBP27.52■■■□□ 2
CPSF4-207ENST00000451876 KRT2P35908 639 aa27.52■■■□□ 2
CPSF4-207ENST00000451876 BECN1Q14457 450 aa27.52■■■□□ 2
CPSF4-207ENST00000451876 PWP2Q15269 919 aaKnown RBP27.52■■■□□ 2
CPSF4-207ENST00000451876 MFSD14CQ5VZR4 134 aa27.52■■■□□ 2
CPSF4-207ENST00000451876 DIS3L2Q8IYB7 885 aaKnown RBP27.52■■■□□ 2
CPSF4-207ENST00000451876 IWS1Q96ST2 819 aa27.52■■■□□ 2
CPSF4-207ENST00000451876 KATNBL1Q9H079 304 aa27.52■■■□□ 2
CPSF4-207ENST00000451876 BTBD18B2RXH4 712 aa27.51■■□□□ 1.99
CPSF4-207ENST00000451876 PDE4DQ08499 809 aa27.51■■□□□ 1.99
CPSF4-207ENST00000451876 MAP3K21Q5TCX8 1036 aa27.51■■□□□ 1.99
CPSF4-207ENST00000451876 TRPV1Q8NER1 839 aa27.51■■□□□ 1.99
CPSF4-207ENST00000451876 MYCLP12524 364 aaPredicted RBP27.5■■□□□ 1.99
CPSF4-207ENST00000451876 CYBAP13498 195 aa27.5■■□□□ 1.99
CPSF4-207ENST00000451876 LARP1BQ659C4 914 aaKnown RBP27.5■■□□□ 1.99
CPSF4-207ENST00000451876 FBXO16Q8IX29 292 aaPredicted RBP27.5■■□□□ 1.99
CPSF4-207ENST00000451876 TNFRSF25Q93038 417 aa27.5■■□□□ 1.99
CPSF4-207ENST00000451876 SREBF1P36956 1147 aa27.49■■□□□ 1.99
CPSF4-207ENST00000451876 MRPS9P82933 396 aaKnown RBP27.49■■□□□ 1.99
CPSF4-207ENST00000451876 EARS2Q5JPH6 523 aaKnown RBP27.49■■□□□ 1.99
CPSF4-207ENST00000451876 VSIG10LQ86VR7 867 aa27.49■■□□□ 1.99
CPSF4-207ENST00000451876 MPHOSPH6Q99547 160 aaKnown RBP27.49■■□□□ 1.99
CPSF4-207ENST00000451876 FRMPD3Q5JV73 1810 aa27.49■■□□□ 1.99
CPSF4-207ENST00000451876 MYCP01106 439 aaPredicted RBP27.49■■□□□ 1.99
CPSF4-207ENST00000451876 PCNX4Q63HM2 1172 aa27.49■■□□□ 1.99
CPSF4-207ENST00000451876 CRYGNQ8WXF5 182 aa27.49■■□□□ 1.99
CPSF4-207ENST00000451876 ABHD16BQ9H3Z7 469 aa27.49■■□□□ 1.99
CPSF4-207ENST00000451876 BRMS1Q9HCU9 246 aa27.49■■□□□ 1.99
CPSF4-207ENST00000451876 CNPY2Q9Y2B0 182 aa27.49■■□□□ 1.99
CPSF4-207ENST00000451876 FAM205CA6NFA0 338 aa27.48■■□□□ 1.99
CPSF4-207ENST00000451876 ZNF865P0CJ78 1059 aaPredicted RBP27.48■■□□□ 1.99
CPSF4-207ENST00000451876 CCND3P30281 292 aaPredicted RBP27.48■■□□□ 1.99
CPSF4-207ENST00000451876 STXBP2Q15833 593 aa27.48■■□□□ 1.99
CPSF4-207ENST00000451876 MCTP2Q6DN12 878 aa27.48■■□□□ 1.99
CPSF4-207ENST00000451876 ARMC5Q96C12 935 aa27.48■■□□□ 1.99
CPSF4-207ENST00000451876 ZHX1Q9UKY1 873 aaPredicted RBP27.48■■□□□ 1.99
CPSF4-207ENST00000451876 B4DLN1 442 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms