RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 PIBF1Q8WXW3 757 aa5□□□□□ -1.61
HMGB3P22-202ENST00000451823 C20orf173Q96LM9 149 aa5□□□□□ -1.61
HMGB3P22-202ENST00000451823 CCDC74BQ96LY2 380 aa5□□□□□ -1.61
HMGB3P22-202ENST00000451823 CFAP53Q96M91 514 aa5□□□□□ -1.61
HMGB3P22-202ENST00000451823 KREMEN1Q96MU8 473 aa5□□□□□ -1.61
HMGB3P22-202ENST00000451823 FAM161BQ96MY7 647 aa5□□□□□ -1.61
HMGB3P22-202ENST00000451823 LNPKQ9C0E8 428 aa5□□□□□ -1.61
HMGB3P22-202ENST00000451823 SLC6A17Q9H1V8 727 aa5□□□□□ -1.61
HMGB3P22-202ENST00000451823 SMC4Q9NTJ3 1288 aa5□□□□□ -1.61
HMGB3P22-202ENST00000451823 GPR160Q9UJ42 338 aa5□□□□□ -1.61
HMGB3P22-202ENST00000451823 YBX2Q9Y2T7 364 aaKnown RBP5□□□□□ -1.61
HMGB3P22-202ENST00000451823 ZCCHC11Q5TAX3 1644 aaKnown RBP5□□□□□ -1.61
HMGB3P22-202ENST00000451823 ARHGEF28Q8N1W1 1705 aaKnown RBP5□□□□□ -1.61
HMGB3P22-202ENST00000451823 TUBGCP6Q96RT7 1819 aa5□□□□□ -1.61
HMGB3P22-202ENST00000451823 ABCA9Q8IUA7 1624 aa4.99□□□□□ -1.61
HMGB3P22-202ENST00000451823 MINDY4BA8MYZ0 360 aa4.99□□□□□ -1.61
HMGB3P22-202ENST00000451823 LETM1O95202 739 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P22-202ENST00000451823 MBD3O95983 291 aa4.99□□□□□ -1.61
HMGB3P22-202ENST00000451823 CTSHP09668 335 aa4.99□□□□□ -1.61
HMGB3P22-202ENST00000451823 GBP1P32455 592 aa4.99□□□□□ -1.61
HMGB3P22-202ENST00000451823 CTSWP56202 376 aa4.99□□□□□ -1.61
HMGB3P22-202ENST00000451823 LMNB2Q03252 620 aa4.99□□□□□ -1.61
HMGB3P22-202ENST00000451823 CUL4AQ13619 759 aa4.99□□□□□ -1.61
HMGB3P22-202ENST00000451823 PKP1Q13835 747 aa4.99□□□□□ -1.61
HMGB3P22-202ENST00000451823 NR0B2Q15466 257 aa4.99□□□□□ -1.61
HMGB3P22-202ENST00000451823 GATAD2BQ8WXI9 593 aa4.99□□□□□ -1.61
HMGB3P22-202ENST00000451823 ANKRD7Q92527 254 aa4.99□□□□□ -1.61
HMGB3P22-202ENST00000451823 TSR2Q969E8 191 aaKnown RBP4.99□□□□□ -1.61
HMGB3P22-202ENST00000451823 KRTAP4-11Q9BYQ6 195 aa4.99□□□□□ -1.61
HMGB3P22-202ENST00000451823 CHMP4BQ9H444 224 aaKnown RBP4.99□□□□□ -1.61
HMGB3P22-202ENST00000451823 C14orf93Q9H972 538 aaKnown RBP4.99□□□□□ -1.61
HMGB3P22-202ENST00000451823 REV1Q9UBZ9 1251 aa4.99□□□□□ -1.61
HMGB3P22-202ENST00000451823 KLHL3Q9UH77 587 aa4.99□□□□□ -1.61
HMGB3P22-202ENST00000451823 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.99□□□□□ -1.61
HMGB3P22-202ENST00000451823 AK9Q5TCS8 1911 aa4.99□□□□□ -1.61
HMGB3P22-202ENST00000451823 GLI2P10070 1586 aa4.99□□□□□ -1.61
HMGB3P22-202ENST00000451823 UGGT1Q9NYU2 1555 aa4.99□□□□□ -1.61
HMGB3P22-202ENST00000451823 CLTCQ00610 1675 aaKnown RBP4.99□□□□□ -1.61
HMGB3P22-202ENST00000451823 FAM135BQ49AJ0 1406 aa4.98□□□□□ -1.61
HMGB3P22-202ENST00000451823 PIK3C2BO00750 1634 aa4.98□□□□□ -1.61
HMGB3P22-202ENST00000451823 CTIFO43310 598 aaKnown RBP4.98□□□□□ -1.61
HMGB3P22-202ENST00000451823 PEX10O60683 326 aa4.98□□□□□ -1.61
HMGB3P22-202ENST00000451823 ZNF853P0CG23 659 aa4.98□□□□□ -1.61
HMGB3P22-202ENST00000451823 HOXA5P20719 270 aa4.98□□□□□ -1.61
HMGB3P22-202ENST00000451823 RPL10P27635 214 aaKnown RBP4.98□□□□□ -1.61
HMGB3P22-202ENST00000451823 GBP2P32456 591 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P22-202ENST00000451823 BUD31P41223 144 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P22-202ENST00000451823 KIAA2012Q0VF49 1180 aa4.98□□□□□ -1.61
HMGB3P22-202ENST00000451823 SNX17Q15036 470 aa4.98□□□□□ -1.61
HMGB3P22-202ENST00000451823 ATP2B3Q16720 1220 aa4.98□□□□□ -1.61
HMGB3P22-202ENST00000451823 TTC22Q5TAA0 569 aa4.98□□□□□ -1.61
HMGB3P22-202ENST00000451823 IRF2BP1Q8IU81 584 aa4.98□□□□□ -1.61
HMGB3P22-202ENST00000451823 SLFN12Q8IYM2 578 aa4.98□□□□□ -1.61
HMGB3P22-202ENST00000451823 PHACTR4Q8IZ21 702 aa4.98□□□□□ -1.61
HMGB3P22-202ENST00000451823 TMEM87AQ8NBN3 555 aa4.98□□□□□ -1.61
HMGB3P22-202ENST00000451823 LINC01599Q8WXQ3 324 aa4.98□□□□□ -1.61
HMGB3P22-202ENST00000451823 SHISA4Q96DD7 197 aa4.98□□□□□ -1.61
HMGB3P22-202ENST00000451823 VWCEQ96DN2 955 aa4.98□□□□□ -1.61
HMGB3P22-202ENST00000451823 INTS4Q96HW7 963 aaKnown RBP4.98□□□□□ -1.61
HMGB3P22-202ENST00000451823 SLC12A5Q9H2X9 1139 aa4.98□□□□□ -1.61
HMGB3P22-202ENST00000451823 DCTPP1Q9H773 170 aa4.98□□□□□ -1.61
HMGB3P22-202ENST00000451823 CNOT6Q9ULM6 557 aaKnown RBP4.98□□□□□ -1.61
HMGB3P22-202ENST00000451823 RTL1A6NKG5 1358 aa4.98□□□□□ -1.61
HMGB3P22-202ENST00000451823 NCANO14594 1321 aa4.97□□□□□ -1.61
HMGB3P22-202ENST00000451823 ATP10DQ9P241 1426 aa4.97□□□□□ -1.61
HMGB3P22-202ENST00000451823 ATP7AQ04656 1500 aa4.97□□□□□ -1.61
HMGB3P22-202ENST00000451823 FRMPD1Q5SYB0 1578 aa4.97□□□□□ -1.61
HMGB3P22-202ENST00000451823 CD163L1Q9NR16 1453 aa4.97□□□□□ -1.61
HMGB3P22-202ENST00000451823 RBM47A0AV96 593 aaKnown RBP4.97□□□□□ -1.61
HMGB3P22-202ENST00000451823 VAMP4O75379 141 aa4.97□□□□□ -1.61
HMGB3P22-202ENST00000451823 U2AF1L5P0DN76 240 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P22-202ENST00000451823 NCLP19338 710 aaKnown RBP4.97□□□□□ -1.61
HMGB3P22-202ENST00000451823 ST13P50502 369 aaKnown RBP4.97□□□□□ -1.61
HMGB3P22-202ENST00000451823 CHMP4BP1P59074 171 aa4.97□□□□□ -1.61
HMGB3P22-202ENST00000451823 U2AF1Q01081 240 aaKnown RBP eCLIP4.97□□□□□ -1.61
HMGB3P22-202ENST00000451823 TEKQ02763 1124 aa4.97□□□□□ -1.61
HMGB3P22-202ENST00000451823 NOLC1Q14978 699 aaKnown RBP eCLIP4.97□□□□□ -1.61
HMGB3P22-202ENST00000451823 SYCP1Q15431 976 aa4.97□□□□□ -1.61
HMGB3P22-202ENST00000451823 ANKRD45Q5TZF3 282 aa4.97□□□□□ -1.61
HMGB3P22-202ENST00000451823 EFCAB2Q5VUJ9 269 aa4.97□□□□□ -1.61
HMGB3P22-202ENST00000451823 ZGPATQ8N5A5 531 aaKnown RBP4.97□□□□□ -1.61
HMGB3P22-202ENST00000451823 FAM184AQ8NB25 1140 aa4.97□□□□□ -1.61
HMGB3P22-202ENST00000451823 TMEM74Q96NL1 305 aa4.97□□□□□ -1.61
HMGB3P22-202ENST00000451823 FUCA2Q9BTY2 467 aa4.97□□□□□ -1.61
HMGB3P22-202ENST00000451823 RSRP1Q9BUV0 290 aa4.97□□□□□ -1.61
HMGB3P22-202ENST00000451823 CHMP4AQ9BY43 222 aa4.97□□□□□ -1.61
HMGB3P22-202ENST00000451823 ASCC2Q9H1I8 757 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P22-202ENST00000451823 GCM1Q9NP62 436 aa4.97□□□□□ -1.61
HMGB3P22-202ENST00000451823 PARD6AQ9NPB6 346 aa4.97□□□□□ -1.61
HMGB3P22-202ENST00000451823 RAPGEFL1Q9UHV5 662 aa4.97□□□□□ -1.61
HMGB3P22-202ENST00000451823 ZMYM5Q9UJ78 669 aa4.97□□□□□ -1.61
HMGB3P22-202ENST00000451823 POLR3KQ9Y2Y1 108 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P22-202ENST00000451823 KCTD3Q9Y597 815 aa4.97□□□□□ -1.61
HMGB3P22-202ENST00000451823 ABCC3O15438 1527 aa4.97□□□□□ -1.61
HMGB3P22-202ENST00000451823 LRRC7Q96NW7 1537 aa4.97□□□□□ -1.61
HMGB3P22-202ENST00000451823 ZFYVE9O95405 1425 aa4.97□□□□□ -1.61
HMGB3P22-202ENST00000451823 PRR36Q9H6K5 1346 aa4.97□□□□□ -1.61
HMGB3P22-202ENST00000451823 TEX51A0A1B0GUA7 166 aa4.96□□□□□ -1.62
HMGB3P22-202ENST00000451823 SSU72P8A0A1W2PR75 194 aa4.96□□□□□ -1.62
HMGB3P22-202ENST00000451823 SYCE3A1L190 88 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms