RNA–Protein interactions for RNA: ENST00000451542.5

SMPD4-212, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 796 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-212ENST00000451542 C6orf222P0C671 652 aaPredicted RBP13.86□□□□□ -0.19
SMPD4-212ENST00000451542 EDNRBP24530 442 aa13.86□□□□□ -0.19
SMPD4-212ENST00000451542 PDIA3P30101 505 aaKnown RBP13.86□□□□□ -0.19
SMPD4-212ENST00000451542 ADCYAP1R1P41586 468 aa13.86□□□□□ -0.19
SMPD4-212ENST00000451542 NAPAP54920 295 aa13.86□□□□□ -0.19
SMPD4-212ENST00000451542 LRRC41Q15345 812 aa13.86□□□□□ -0.19
SMPD4-212ENST00000451542 GJC2Q5T442 439 aaPredicted RBP13.86□□□□□ -0.19
SMPD4-212ENST00000451542 KCNV1Q6PIU1 500 aa13.86□□□□□ -0.19
SMPD4-212ENST00000451542 FCHSD1Q86WN1 690 aa13.86□□□□□ -0.19
SMPD4-212ENST00000451542 FBXO16Q8IX29 292 aaPredicted RBP13.86□□□□□ -0.19
SMPD4-212ENST00000451542 TSEN34Q9BSV6 310 aaKnown RBP13.86□□□□□ -0.19
SMPD4-212ENST00000451542 WDR11Q9BZH6 1224 aa13.86□□□□□ -0.19
SMPD4-212ENST00000451542 SENP6Q9GZR1 1112 aaPredicted RBP13.86□□□□□ -0.19
SMPD4-212ENST00000451542 KATNBL1Q9H079 304 aa13.86□□□□□ -0.19
SMPD4-212ENST00000451542 ALDH8A1Q9H2A2 487 aaPredicted RBP13.86□□□□□ -0.19
SMPD4-212ENST00000451542 PXMP2Q9NR77 195 aa13.86□□□□□ -0.19
SMPD4-212ENST00000451542 NID2Q14112 1375 aa13.85□□□□□ -0.19
SMPD4-212ENST00000451542 PIK3CDO00329 1044 aa13.85□□□□□ -0.19
SMPD4-212ENST00000451542 STAM2O75886 525 aa13.85□□□□□ -0.19
SMPD4-212ENST00000451542 PGK1P00558 417 aa13.85□□□□□ -0.19
SMPD4-212ENST00000451542 EIF2AK2P19525 551 aaKnown RBP13.85□□□□□ -0.19
SMPD4-212ENST00000451542 CDC27P30260 824 aa13.85□□□□□ -0.19
SMPD4-212ENST00000451542 CCND2P30279 289 aa13.85□□□□□ -0.19
SMPD4-212ENST00000451542 HOXA13P31271 388 aaPredicted RBP13.85□□□□□ -0.19
SMPD4-212ENST00000451542 ADD1P35611 737 aaKnown RBP13.85□□□□□ -0.19
SMPD4-212ENST00000451542 TOB2Q14106 344 aaPredicted RBP13.85□□□□□ -0.19
SMPD4-212ENST00000451542 GNPTABQ3T906 1256 aa13.85□□□□□ -0.19
SMPD4-212ENST00000451542 DUSP28Q4G0W2 176 aa13.85□□□□□ -0.19
SMPD4-212ENST00000451542 GNASQ5JWF2 1037 aa13.85□□□□□ -0.19
SMPD4-212ENST00000451542 IL27Q8NEV9 243 aa13.85□□□□□ -0.19
SMPD4-212ENST00000451542 DIS3LQ8TF46 1054 aaKnown RBP13.85□□□□□ -0.19
SMPD4-212ENST00000451542 IL17RAQ96F46 866 aa13.85□□□□□ -0.19
SMPD4-212ENST00000451542 RNF26Q9BY78 433 aaPredicted RBP13.85□□□□□ -0.19
SMPD4-212ENST00000451542 SLKQ9H2G2 1235 aaPredicted RBP13.85□□□□□ -0.19
SMPD4-212ENST00000451542 ASTN1O14525 1302 aa13.85□□□□□ -0.19
SMPD4-212ENST00000451542 SYNRGQ9UMZ2 1314 aa13.85□□□□□ -0.19
SMPD4-212ENST00000451542 LCTP09848 1927 aa13.84□□□□□ -0.19
SMPD4-212ENST00000451542 OPLAHO14841 1288 aa13.84□□□□□ -0.19
SMPD4-212ENST00000451542 PRPF3O43395 683 aaKnown RBP13.84□□□□□ -0.19
SMPD4-212ENST00000451542 COL6A1P12109 1028 aa13.84□□□□□ -0.19
SMPD4-212ENST00000451542 MYCLP12524 364 aaPredicted RBP13.84□□□□□ -0.19
SMPD4-212ENST00000451542 SCG2P13521 617 aa13.84□□□□□ -0.19
SMPD4-212ENST00000451542 IFNAR1P17181 557 aa13.84□□□□□ -0.19
SMPD4-212ENST00000451542 CST5P28325 142 aaPredicted RBP13.84□□□□□ -0.19
SMPD4-212ENST00000451542 NEK4P51957 841 aa13.84□□□□□ -0.19
SMPD4-212ENST00000451542 GJA9P57773 515 aa13.84□□□□□ -0.19
SMPD4-212ENST00000451542 CCT2P78371 535 aaKnown RBP13.84□□□□□ -0.19
SMPD4-212ENST00000451542 C8orf34Q49A92 452 aa13.84□□□□□ -0.19
SMPD4-212ENST00000451542 MCTP2Q6DN12 878 aa13.84□□□□□ -0.19
SMPD4-212ENST00000451542 TAPT1Q6NXT6 567 aa13.84□□□□□ -0.19
SMPD4-212ENST00000451542 XRRA1Q6P2D8 792 aa13.84□□□□□ -0.19
SMPD4-212ENST00000451542 TLK2Q86UE8 772 aa13.84□□□□□ -0.19
SMPD4-212ENST00000451542 CCDC148Q8NFR7 591 aa13.84□□□□□ -0.19
SMPD4-212ENST00000451542 GLT1D1Q96MS3 346 aa13.84□□□□□ -0.19
SMPD4-212ENST00000451542 PDCD2LQ9BRP1 358 aa13.84□□□□□ -0.19
SMPD4-212ENST00000451542 FAM217BQ9NTX9 383 aaPredicted RBP13.84□□□□□ -0.19
SMPD4-212ENST00000451542 BARHL2Q9NY43 387 aa13.84□□□□□ -0.19
SMPD4-212ENST00000451542 COL20A1Q9P218 1284 aa13.84□□□□□ -0.19
SMPD4-212ENST00000451542 PHF24Q9UPV7 400 aa13.84□□□□□ -0.19
SMPD4-212ENST00000451542 HTTP42858 3142 aa13.84□□□□□ -0.19
SMPD4-212ENST00000451542 hCG_1642624A0A1W2PR95 340 aa13.83□□□□□ -0.2
SMPD4-212ENST00000451542 RBM47A0AV96 593 aaKnown RBP13.83□□□□□ -0.2
SMPD4-212ENST00000451542 DYNC1LI2O43237 492 aaPredicted RBP13.83□□□□□ -0.2
SMPD4-212ENST00000451542 ADAMTS4O75173 837 aa13.83□□□□□ -0.2
SMPD4-212ENST00000451542 CABYRO75952 493 aa13.83□□□□□ -0.2
SMPD4-212ENST00000451542 FOSP01100 380 aaPredicted RBP13.83□□□□□ -0.2
SMPD4-212ENST00000451542 TXNP10599 105 aaKnown RBP13.83□□□□□ -0.2
SMPD4-212ENST00000451542 SMPD1P17405 629 aa13.83□□□□□ -0.2
SMPD4-212ENST00000451542 GNA11P29992 359 aa13.83□□□□□ -0.2
SMPD4-212ENST00000451542 CPT1AP50416 773 aa13.83□□□□□ -0.2
SMPD4-212ENST00000451542 ADCY7P51828 1080 aa13.83□□□□□ -0.2
SMPD4-212ENST00000451542 SSRP1Q08945 709 aaKnown RBP13.83□□□□□ -0.2
SMPD4-212ENST00000451542 FUT2Q10981 343 aa13.83□□□□□ -0.2
SMPD4-212ENST00000451542 PGM5Q15124 567 aa13.83□□□□□ -0.2
SMPD4-212ENST00000451542 PFKFB3Q16875 520 aaPredicted RBP13.83□□□□□ -0.2
SMPD4-212ENST00000451542 SEPT14Q6ZU15 432 aa13.83□□□□□ -0.2
SMPD4-212ENST00000451542 VSIG10LQ86VR7 867 aa13.83□□□□□ -0.2
SMPD4-212ENST00000451542 GPKOWQ92917 476 aaPredicted RBP eCLIP13.83□□□□□ -0.2
SMPD4-212ENST00000451542 VTI1AQ96AJ9 217 aa13.83□□□□□ -0.2
SMPD4-212ENST00000451542 SLC26A6Q9BXS9 759 aa13.83□□□□□ -0.2
SMPD4-212ENST00000451542 C22orf23Q9BZE7 217 aa13.83□□□□□ -0.2
SMPD4-212ENST00000451542 UPF3AQ9H1J1 476 aaKnown RBP13.83□□□□□ -0.2
SMPD4-212ENST00000451542 C6orf50Q9HD87 102 aa13.83□□□□□ -0.2
SMPD4-212ENST00000451542 PDGFCQ9NRA1 345 aa13.83□□□□□ -0.2
SMPD4-212ENST00000451542 GNEQ9Y223 722 aaKnown RBP13.83□□□□□ -0.2
SMPD4-212ENST00000451542 GTF3C3Q9Y5Q9 886 aa13.83□□□□□ -0.2
SMPD4-212ENST00000451542 SMCO2A6NFE2 343 aa13.82□□□□□ -0.2
SMPD4-212ENST00000451542 SEC24BO95487 1268 aa13.82□□□□□ -0.2
SMPD4-212ENST00000451542 MNX1P50219 401 aaPredicted RBP13.82□□□□□ -0.2
SMPD4-212ENST00000451542 ACLYP53396 1101 aa13.82□□□□□ -0.2
SMPD4-212ENST00000451542 NKX3-2P78367 333 aa13.82□□□□□ -0.2
SMPD4-212ENST00000451542 FSCN1Q16658 493 aaKnown RBP13.82□□□□□ -0.2
SMPD4-212ENST00000451542 PRPF38BQ5VTL8 546 aaKnown RBP13.82□□□□□ -0.2
SMPD4-212ENST00000451542 WWC2Q6AWC2 1192 aa13.82□□□□□ -0.2
SMPD4-212ENST00000451542 USP17L6PQ6QN14 398 aa13.82□□□□□ -0.2
SMPD4-212ENST00000451542 NLRX1Q86UT6 975 aa13.82□□□□□ -0.2
SMPD4-212ENST00000451542 KLHDC9Q8NEP7 349 aa13.82□□□□□ -0.2
SMPD4-212ENST00000451542 BICD2Q8TD16 824 aa13.82□□□□□ -0.2
SMPD4-212ENST00000451542 SEZ6LQ9BYH1 1024 aa13.82□□□□□ -0.2
SMPD4-212ENST00000451542 RIC8AQ9NPQ8 531 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms