RNA–Protein interactions for RNA: ENST00000451070.1

LINC01238-204, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 4

Gene LINC01238, Length 599 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-204ENST00000451070 POLR3EQ9NVU0 708 aa11.59□□□□□ -0.55
LINC01238-204ENST00000451070 ZSWIM5Q9P217 1185 aa11.59□□□□□ -0.55
LINC01238-204ENST00000451070 CHD7Q9P2D1 2997 aa11.59□□□□□ -0.55
LINC01238-204ENST00000451070 SPTBN5Q9NRC6 3674 aaKnown RBP11.59□□□□□ -0.55
LINC01238-204ENST00000451070 NKRFO15226 690 aaKnown RBP eCLIP11.58□□□□□ -0.56
LINC01238-204ENST00000451070 ARIH2O95376 493 aa11.58□□□□□ -0.56
LINC01238-204ENST00000451070 FGBP02675 491 aa11.58□□□□□ -0.56
LINC01238-204ENST00000451070 MYL3P08590 195 aa11.58□□□□□ -0.56
LINC01238-204ENST00000451070 NT5C2P49902 561 aa11.58□□□□□ -0.56
LINC01238-204ENST00000451070 CPT1AP50416 773 aa11.58□□□□□ -0.56
LINC01238-204ENST00000451070 PPP2R5BQ15173 497 aa11.58□□□□□ -0.56
LINC01238-204ENST00000451070 CDC37Q16543 378 aaPredicted RBP11.58□□□□□ -0.56
LINC01238-204ENST00000451070 CCDC178Q5BJE1 867 aa11.58□□□□□ -0.56
LINC01238-204ENST00000451070 ADGRF4Q8IZF3 695 aa11.58□□□□□ -0.56
LINC01238-204ENST00000451070 USP38Q8NB14 1042 aa11.58□□□□□ -0.56
LINC01238-204ENST00000451070 OR6J1Q8NGC5 347 aa11.58□□□□□ -0.56
LINC01238-204ENST00000451070 SCFD2Q8WU76 684 aa11.58□□□□□ -0.56
LINC01238-204ENST00000451070 SCLYQ96I15 445 aa11.58□□□□□ -0.56
LINC01238-204ENST00000451070 KAT14Q9H8E8 782 aa11.58□□□□□ -0.56
LINC01238-204ENST00000451070 COL20A1Q9P218 1284 aa11.58□□□□□ -0.56
LINC01238-204ENST00000451070 TTC28Q96AY4 2481 aa11.58□□□□□ -0.56
LINC01238-204ENST00000451070 TRIP12Q14669 1992 aaPredicted RBP11.58□□□□□ -0.56
LINC01238-204ENST00000451070 TET1Q8NFU7 2136 aa11.57□□□□□ -0.56
LINC01238-204ENST00000451070 TANC1Q9C0D5 1861 aa11.57□□□□□ -0.56
LINC01238-204ENST00000451070 A6NJR5 290 aa11.57□□□□□ -0.56
LINC01238-204ENST00000451070 HIP1O00291 1037 aa11.57□□□□□ -0.56
LINC01238-204ENST00000451070 CYP2C9P11712 490 aa11.57□□□□□ -0.56
LINC01238-204ENST00000451070 IMMTQ16891 758 aaKnown RBP11.57□□□□□ -0.56
LINC01238-204ENST00000451070 NBPF20Q3BBV1 942 aa11.57□□□□□ -0.56
LINC01238-204ENST00000451070 ASPRV1Q53RT3 343 aa11.57□□□□□ -0.56
LINC01238-204ENST00000451070 CCDC62Q6P9F0 684 aa11.57□□□□□ -0.56
LINC01238-204ENST00000451070 OTOP2Q7RTS6 562 aa11.57□□□□□ -0.56
LINC01238-204ENST00000451070 SYTL5Q8TDW5 730 aaPredicted RBP11.57□□□□□ -0.56
LINC01238-204ENST00000451070 PPP1R13LQ8WUF5 828 aa11.57□□□□□ -0.56
LINC01238-204ENST00000451070 TAAR1Q96RJ0 339 aa11.57□□□□□ -0.56
LINC01238-204ENST00000451070 MTG1Q9BT17 334 aaPredicted RBP11.57□□□□□ -0.56
LINC01238-204ENST00000451070 JMJD4Q9H9V9 463 aa11.57□□□□□ -0.56
LINC01238-204ENST00000451070 YBX2Q9Y2T7 364 aaKnown RBP11.57□□□□□ -0.56
LINC01238-204ENST00000451070 TNKSO95271 1327 aa11.57□□□□□ -0.56
LINC01238-204ENST00000451070 ABCB11O95342 1321 aa11.57□□□□□ -0.56
LINC01238-204ENST00000451070 MYH7BA7E2Y1 1941 aa11.56□□□□□ -0.56
LINC01238-204ENST00000451070 TXNP10599 105 aaKnown RBP11.56□□□□□ -0.56
LINC01238-204ENST00000451070 GSPT1P15170 499 aaKnown RBP11.56□□□□□ -0.56
LINC01238-204ENST00000451070 PDE4AP27815 886 aa11.56□□□□□ -0.56
LINC01238-204ENST00000451070 QRICH1Q2TAL8 776 aa11.56□□□□□ -0.56
LINC01238-204ENST00000451070 STAG2Q8N3U4 1231 aa11.56□□□□□ -0.56
LINC01238-204ENST00000451070 MPHOSPH6Q99547 160 aaKnown RBP11.56□□□□□ -0.56
LINC01238-204ENST00000451070 KRT23Q9C075 422 aa11.56□□□□□ -0.56
LINC01238-204ENST00000451070 MAF1Q9H063 256 aa11.56□□□□□ -0.56
LINC01238-204ENST00000451070 PRDM12Q9H4Q4 367 aa11.56□□□□□ -0.56
LINC01238-204ENST00000451070 BAZ2BQ9UIF8 2168 aaKnown RBP11.56□□□□□ -0.56
LINC01238-204ENST00000451070 OPLAHO14841 1288 aa11.55□□□□□ -0.56
LINC01238-204ENST00000451070 PARP1P09874 1014 aaKnown RBP11.55□□□□□ -0.56
LINC01238-204ENST00000451070 SUPT20HL2P0C7V6 817 aa11.55□□□□□ -0.56
LINC01238-204ENST00000451070 ADGRE1Q14246 886 aa11.55□□□□□ -0.56
LINC01238-204ENST00000451070 TTLL4Q14679 1199 aa11.55□□□□□ -0.56
LINC01238-204ENST00000451070 SEC23AQ15436 765 aa11.55□□□□□ -0.56
LINC01238-204ENST00000451070 RAB30Q15771 203 aa11.55□□□□□ -0.56
LINC01238-204ENST00000451070 BRDTQ58F21 947 aaPredicted RBP11.55□□□□□ -0.56
LINC01238-204ENST00000451070 NFRKBQ6P4R8 1299 aa11.55□□□□□ -0.56
LINC01238-204ENST00000451070 CYB5R4Q7L1T6 521 aa11.55□□□□□ -0.56
LINC01238-204ENST00000451070 RPUSD2Q8IZ73 545 aaKnown RBP11.55□□□□□ -0.56
LINC01238-204ENST00000451070 MTIF3Q9H2K0 278 aaKnown RBP11.55□□□□□ -0.56
LINC01238-204ENST00000451070 NKX2-4Q9H2Z4 354 aa11.55□□□□□ -0.56
LINC01238-204ENST00000451070 CNNM2Q9H8M5 875 aa11.55□□□□□ -0.56
LINC01238-204ENST00000451070 VAT1LQ9HCJ6 419 aa11.55□□□□□ -0.56
LINC01238-204ENST00000451070 GPHNQ9NQX3 736 aaPredicted RBP11.55□□□□□ -0.56
LINC01238-204ENST00000451070 CTNNA3Q9UI47 895 aa11.55□□□□□ -0.56
LINC01238-204ENST00000451070 MSRAQ9UJ68 235 aa11.55□□□□□ -0.56
LINC01238-204ENST00000451070 RAD50Q92878 1312 aa11.55□□□□□ -0.56
LINC01238-204ENST00000451070 B4DLN1 442 aa11.54□□□□□ -0.56
LINC01238-204ENST00000451070 KPNA6O60684 536 aa11.54□□□□□ -0.56
LINC01238-204ENST00000451070 PPP1R11O60927 126 aaPredicted RBP11.54□□□□□ -0.56
LINC01238-204ENST00000451070 MRPL12P52815 198 aaKnown RBP11.54□□□□□ -0.56
LINC01238-204ENST00000451070 RABGGTBP53611 331 aa11.54□□□□□ -0.56
LINC01238-204ENST00000451070 ARHGAP1Q07960 439 aa11.54□□□□□ -0.56
LINC01238-204ENST00000451070 LY6KQ17RY6 165 aa11.54□□□□□ -0.56
LINC01238-204ENST00000451070 SLC35G1Q2M3R5 365 aa11.54□□□□□ -0.56
LINC01238-204ENST00000451070 FAM47CQ5HY64 1035 aa11.54□□□□□ -0.56
LINC01238-204ENST00000451070 IFIT1BQ5T764 474 aaKnown RBP11.54□□□□□ -0.56
LINC01238-204ENST00000451070 TTC22Q5TAA0 569 aa11.54□□□□□ -0.56
LINC01238-204ENST00000451070 SEPT14Q6ZU15 432 aa11.54□□□□□ -0.56
LINC01238-204ENST00000451070 FBXO11Q86XK2 927 aa11.54□□□□□ -0.56
LINC01238-204ENST00000451070 MCF2L2Q86YR7 1114 aa11.54□□□□□ -0.56
LINC01238-204ENST00000451070 NSUN6Q8TEA1 469 aaKnown RBP11.54□□□□□ -0.56
LINC01238-204ENST00000451070 AFG1LQ8WV93 481 aa11.54□□□□□ -0.56
LINC01238-204ENST00000451070 MTMR8Q96EF0 704 aa11.54□□□□□ -0.56
LINC01238-204ENST00000451070 CTAGE1Q96RT6 745 aa11.54□□□□□ -0.56
LINC01238-204ENST00000451070 RMDN3Q96TC7 470 aa11.54□□□□□ -0.56
LINC01238-204ENST00000451070 UBAC1Q9BSL1 405 aa11.54□□□□□ -0.56
LINC01238-204ENST00000451070 PRDM6Q9NQX0 595 aa11.54□□□□□ -0.56
LINC01238-204ENST00000451070 MRPL11Q9Y3B7 192 aaKnown RBP11.54□□□□□ -0.56
LINC01238-204ENST00000451070 SLC4A7Q9Y6M7 1214 aa11.54□□□□□ -0.56
LINC01238-204ENST00000451070 PTPRSQ13332 1948 aa11.54□□□□□ -0.56
LINC01238-204ENST00000451070 REV3LO60673 3130 aa11.53□□□□□ -0.56
LINC01238-204ENST00000451070 DHX16O60231 1041 aaKnown RBP11.53□□□□□ -0.56
LINC01238-204ENST00000451070 PFKMP08237 780 aa11.53□□□□□ -0.56
LINC01238-204ENST00000451070 MMP3P08254 477 aa11.53□□□□□ -0.56
LINC01238-204ENST00000451070 MYOGP15173 224 aa11.53□□□□□ -0.56
LINC01238-204ENST00000451070 EIF2AK2P19525 551 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms