RNA–Protein interactions for RNA: ENST00000450686.1

LINC01004-202, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 3 BASIC

Gene LINC01004, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-202ENST00000450686 CHMP4BP1P59074 171 aa11.98□□□□□ -0.49
LINC01004-202ENST00000450686 NKX3-2P78367 333 aa11.98□□□□□ -0.49
LINC01004-202ENST00000450686 TKFCQ3LXA3 575 aa11.98□□□□□ -0.49
LINC01004-202ENST00000450686 POTEGQ6S5H5 508 aa11.98□□□□□ -0.49
LINC01004-202ENST00000450686 DEFB128Q7Z7B8 93 aa11.98□□□□□ -0.49
LINC01004-202ENST00000450686 MICALL1Q8N3F8 863 aa11.98□□□□□ -0.49
LINC01004-202ENST00000450686 DCAF4Q8WV16 495 aa11.98□□□□□ -0.49
LINC01004-202ENST00000450686 CLEC4DQ8WXI8 215 aa11.98□□□□□ -0.49
LINC01004-202ENST00000450686 HERVK_113Q902F9 699 aa11.98□□□□□ -0.49
LINC01004-202ENST00000450686 ANAPC4Q9UJX5 808 aa11.98□□□□□ -0.49
LINC01004-202ENST00000450686 PRRC2BQ5JSZ5 2229 aaKnown RBP11.97□□□□□ -0.49
LINC01004-202ENST00000450686 NEDD4P46934 1319 aa11.97□□□□□ -0.49
LINC01004-202ENST00000450686 ZBBXA8MT70 800 aa11.97□□□□□ -0.49
LINC01004-202ENST00000450686 FGBP02675 491 aa11.97□□□□□ -0.49
LINC01004-202ENST00000450686 NOVP48745 357 aa11.97□□□□□ -0.49
LINC01004-202ENST00000450686 TTLL4Q14679 1199 aa11.97□□□□□ -0.49
LINC01004-202ENST00000450686 USH1GQ495M9 461 aa11.97□□□□□ -0.49
LINC01004-202ENST00000450686 OR6J1Q8NGC5 347 aa11.97□□□□□ -0.49
LINC01004-202ENST00000450686 EVI5LQ96CN4 794 aa11.97□□□□□ -0.49
LINC01004-202ENST00000450686 GAS2L1Q99501 681 aaPredicted RBP11.97□□□□□ -0.49
LINC01004-202ENST00000450686 WDR11Q9BZH6 1224 aa11.97□□□□□ -0.49
LINC01004-202ENST00000450686 LNPKQ9C0E8 428 aa11.97□□□□□ -0.49
LINC01004-202ENST00000450686 ALDH8A1Q9H2A2 487 aaPredicted RBP11.97□□□□□ -0.49
LINC01004-202ENST00000450686 CERS4Q9HA82 394 aa11.97□□□□□ -0.49
LINC01004-202ENST00000450686 VTA1Q9NP79 307 aa11.97□□□□□ -0.49
LINC01004-202ENST00000450686 RAPGEFL1Q9UHV5 662 aa11.97□□□□□ -0.49
LINC01004-202ENST00000450686 TRIP12Q14669 1992 aaPredicted RBP11.96□□□□□ -0.49
LINC01004-202ENST00000450686 SCN10AQ9Y5Y9 1956 aa11.96□□□□□ -0.49
LINC01004-202ENST00000450686 PTPRSQ13332 1948 aa11.96□□□□□ -0.49
LINC01004-202ENST00000450686 RFXAPO00287 272 aa11.96□□□□□ -0.49
LINC01004-202ENST00000450686 ARHGEF15O94989 841 aa11.96□□□□□ -0.49
LINC01004-202ENST00000450686 HSPD1P10809 573 aaKnown RBP11.96□□□□□ -0.49
LINC01004-202ENST00000450686 PDHBP11177 359 aa11.96□□□□□ -0.49
LINC01004-202ENST00000450686 TOP1P11387 765 aaKnown RBP11.96□□□□□ -0.49
LINC01004-202ENST00000450686 FAM47CQ5HY64 1035 aa11.96□□□□□ -0.49
LINC01004-202ENST00000450686 IQSEC1Q6DN90 963 aa11.96□□□□□ -0.49
LINC01004-202ENST00000450686 B4GALNT3Q6L9W6 998 aa11.96□□□□□ -0.49
LINC01004-202ENST00000450686 MORC4Q8TE76 937 aa11.96□□□□□ -0.49
LINC01004-202ENST00000450686 TBC1D5Q92609 795 aa11.96□□□□□ -0.49
LINC01004-202ENST00000450686 UBA5Q9GZZ9 404 aa11.96□□□□□ -0.49
LINC01004-202ENST00000450686 HELLSQ9NRZ9 838 aa11.96□□□□□ -0.49
LINC01004-202ENST00000450686 MSRAQ9UJ68 235 aa11.96□□□□□ -0.49
LINC01004-202ENST00000450686 MYH6P13533 1939 aa11.96□□□□□ -0.5
LINC01004-202ENST00000450686 TANC1Q9C0D5 1861 aa11.95□□□□□ -0.5
LINC01004-202ENST00000450686 LAMA4Q16363 1823 aa11.95□□□□□ -0.5
LINC01004-202ENST00000450686 TNKSO95271 1327 aa11.95□□□□□ -0.5
LINC01004-202ENST00000450686 TRIM6-TRIM34B2RNG4 842 aa11.95□□□□□ -0.5
LINC01004-202ENST00000450686 GTPBP6O43824 516 aaPredicted RBP11.95□□□□□ -0.5
LINC01004-202ENST00000450686 ZEB2O60315 1214 aa11.95□□□□□ -0.5
LINC01004-202ENST00000450686 CABYRO75952 493 aa11.95□□□□□ -0.5
LINC01004-202ENST00000450686 ARIH2O95376 493 aa11.95□□□□□ -0.5
LINC01004-202ENST00000450686 FGRP09769 529 aa11.95□□□□□ -0.5
LINC01004-202ENST00000450686 RPS6P62753 249 aaKnown RBP11.95□□□□□ -0.5
LINC01004-202ENST00000450686 PURAQ00577 322 aaKnown RBP11.95□□□□□ -0.5
LINC01004-202ENST00000450686 ZNF543Q08ER8 600 aa11.95□□□□□ -0.5
LINC01004-202ENST00000450686 ALX1Q15699 326 aa11.95□□□□□ -0.5
LINC01004-202ENST00000450686 NBPF20Q3BBV1 942 aa11.95□□□□□ -0.5
LINC01004-202ENST00000450686 DUSP28Q4G0W2 176 aa11.95□□□□□ -0.5
LINC01004-202ENST00000450686 MCMDC2Q4G0Z9 681 aa11.95□□□□□ -0.5
LINC01004-202ENST00000450686 TJAP1Q5JTD0 557 aa11.95□□□□□ -0.5
LINC01004-202ENST00000450686 KRT40Q6A162 431 aa11.95□□□□□ -0.5
LINC01004-202ENST00000450686 BTNL9Q6UXG8 535 aa11.95□□□□□ -0.5
LINC01004-202ENST00000450686 RNF207Q6ZRF8 634 aa11.95□□□□□ -0.5
LINC01004-202ENST00000450686 SPRED2Q7Z698 418 aa11.95□□□□□ -0.5
LINC01004-202ENST00000450686 RILPL2Q969X0 211 aa11.95□□□□□ -0.5
LINC01004-202ENST00000450686 NECAB3Q96P71 396 aaPredicted RBP11.95□□□□□ -0.5
LINC01004-202ENST00000450686 TMEM121BQ9BXQ6 578 aaPredicted RBP11.95□□□□□ -0.5
LINC01004-202ENST00000450686 CCDC171Q6TFL3 1326 aa11.94□□□□□ -0.5
LINC01004-202ENST00000450686 EPOPA6NHQ4 379 aa11.94□□□□□ -0.5
LINC01004-202ENST00000450686 PDE4DQ08499 809 aa11.94□□□□□ -0.5
LINC01004-202ENST00000450686 RAB30Q15771 203 aa11.94□□□□□ -0.5
LINC01004-202ENST00000450686 PPP2R2DQ66LE6 453 aa11.94□□□□□ -0.5
LINC01004-202ENST00000450686 MAMSTRQ6ZN01 415 aa11.94□□□□□ -0.5
LINC01004-202ENST00000450686 TMCO2Q7Z6W1 182 aaPredicted RBP11.94□□□□□ -0.5
LINC01004-202ENST00000450686 SLC28A3Q9HAS3 691 aa11.94□□□□□ -0.5
LINC01004-202ENST00000450686 COL20A1Q9P218 1284 aa11.94□□□□□ -0.5
LINC01004-202ENST00000450686 BOLA1Q9Y3E2 137 aa11.94□□□□□ -0.5
LINC01004-202ENST00000450686 SLC4A7Q9Y6M7 1214 aa11.94□□□□□ -0.5
LINC01004-202ENST00000450686 SORBS3O60504 671 aa11.93□□□□□ -0.5
LINC01004-202ENST00000450686 TFF2Q03403 129 aa11.93□□□□□ -0.5
LINC01004-202ENST00000450686 PPP2R5BQ15173 497 aa11.93□□□□□ -0.5
LINC01004-202ENST00000450686 PPP4R3BQ5MIZ7 849 aa11.93□□□□□ -0.5
LINC01004-202ENST00000450686 AKNAD1Q5T1N1 836 aa11.93□□□□□ -0.5
LINC01004-202ENST00000450686 CHST3Q7LGC8 479 aa11.93□□□□□ -0.5
LINC01004-202ENST00000450686 MTG1Q9BT17 334 aaPredicted RBP11.93□□□□□ -0.5
LINC01004-202ENST00000450686 RYDENQ9NUL5 291 aaKnown RBP11.93□□□□□ -0.5
LINC01004-202ENST00000450686 ADD3Q9UEY8 706 aaKnown RBP11.93□□□□□ -0.5
LINC01004-202ENST00000450686 KIAA1217Q5T5P2 1943 aa11.92□□□□□ -0.5
LINC01004-202ENST00000450686 RBM47A0AV96 593 aaKnown RBP11.92□□□□□ -0.5
LINC01004-202ENST00000450686 PPP1R37O75864 691 aa11.92□□□□□ -0.5
LINC01004-202ENST00000450686 CA3P07451 260 aa11.92□□□□□ -0.5
LINC01004-202ENST00000450686 TXNP10599 105 aaKnown RBP11.92□□□□□ -0.5
LINC01004-202ENST00000450686 ATP2A2P16615 1042 aaKnown RBP11.92□□□□□ -0.5
LINC01004-202ENST00000450686 CPT1AP50416 773 aa11.92□□□□□ -0.5
LINC01004-202ENST00000450686 MFSD6Q6ZSS7 791 aa11.92□□□□□ -0.5
LINC01004-202ENST00000450686 SEPT14Q6ZU15 432 aa11.92□□□□□ -0.5
LINC01004-202ENST00000450686 ADAMTS19Q8TE59 1207 aa11.92□□□□□ -0.5
LINC01004-202ENST00000450686 TCP11L1Q9NUJ3 509 aa11.92□□□□□ -0.5
LINC01004-202ENST00000450686 POLR3EQ9NVU0 708 aa11.92□□□□□ -0.5
LINC01004-202ENST00000450686 THEGQ9P2T0 379 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms