RNA–Protein interactions for RNA: ENST00000449918.1

CLTCL1-203, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-203ENST00000449918 MB21D2Q8IYB1 491 aaPredicted RBP20.16■□□□□ 0.82
CLTCL1-203ENST00000449918 TMEM199Q8N511 208 aa20.16■□□□□ 0.82
CLTCL1-203ENST00000449918 SAMD3Q8N6K7 520 aa20.16■□□□□ 0.82
CLTCL1-203ENST00000449918 IGDCC4Q8TDY8 1250 aa20.16■□□□□ 0.82
CLTCL1-203ENST00000449918 MTA3Q9BTC8 594 aa20.16■□□□□ 0.82
CLTCL1-203ENST00000449918 RIOX1Q9H6W3 641 aa20.16■□□□□ 0.82
CLTCL1-203ENST00000449918 LCTP09848 1927 aa20.15■□□□□ 0.82
CLTCL1-203ENST00000449918 MYL3P08590 195 aa20.15■□□□□ 0.82
CLTCL1-203ENST00000449918 EPHB4P54760 987 aa20.15■□□□□ 0.82
CLTCL1-203ENST00000449918 PPIGQ13427 754 aaKnown RBP eCLIP20.15■□□□□ 0.82
CLTCL1-203ENST00000449918 HOMER1Q86YM7 354 aa20.15■□□□□ 0.82
CLTCL1-203ENST00000449918 TMTC2Q8N394 836 aa20.15■□□□□ 0.82
CLTCL1-203ENST00000449918 RNPC3Q96LT9 517 aaKnown RBP20.15■□□□□ 0.82
CLTCL1-203ENST00000449918 LSG1Q9H089 658 aaKnown RBP20.15■□□□□ 0.82
CLTCL1-203ENST00000449918 SENP2Q9HC62 589 aa20.15■□□□□ 0.82
CLTCL1-203ENST00000449918 MTMR10Q9NXD2 777 aa20.15■□□□□ 0.82
CLTCL1-203ENST00000449918 COL20A1Q9P218 1284 aa20.15■□□□□ 0.82
CLTCL1-203ENST00000449918 GRIN2DO15399 1336 aa20.15■□□□□ 0.82
CLTCL1-203ENST00000449918 LRRC37A2A6NM11 1700 aa20.15■□□□□ 0.82
CLTCL1-203ENST00000449918 EIF3JO75822 258 aaKnown RBP20.14■□□□□ 0.81
CLTCL1-203ENST00000449918 MCM5P33992 734 aa20.14■□□□□ 0.81
CLTCL1-203ENST00000449918 HSD17B4P51659 736 aa20.14■□□□□ 0.81
CLTCL1-203ENST00000449918 ANTXR2P58335 489 aa20.14■□□□□ 0.81
CLTCL1-203ENST00000449918 PSMC6P62333 389 aa20.14■□□□□ 0.81
CLTCL1-203ENST00000449918 SMAD3P84022 425 aaKnown RBP20.14■□□□□ 0.81
CLTCL1-203ENST00000449918 PURAQ00577 322 aaKnown RBP20.14■□□□□ 0.81
CLTCL1-203ENST00000449918 SEPT14Q6ZU15 432 aa20.14■□□□□ 0.81
CLTCL1-203ENST00000449918 MAP3K14Q99558 947 aa20.14■□□□□ 0.81
CLTCL1-203ENST00000449918 MTG1Q9BT17 334 aaPredicted RBP20.14■□□□□ 0.81
CLTCL1-203ENST00000449918 ANO2Q9NQ90 1003 aa20.14■□□□□ 0.81
CLTCL1-203ENST00000449918 PNMA6FA0A0J9YX94 578 aa20.13■□□□□ 0.81
CLTCL1-203ENST00000449918 A6NJR5 290 aa20.13■□□□□ 0.81
CLTCL1-203ENST00000449918 PPP1R11O60927 126 aaPredicted RBP20.13■□□□□ 0.81
CLTCL1-203ENST00000449918 KIF5BP33176 963 aa20.13■□□□□ 0.81
CLTCL1-203ENST00000449918 GHRHRQ02643 423 aa20.13■□□□□ 0.81
CLTCL1-203ENST00000449918 PIGSQ96S52 555 aa20.13■□□□□ 0.81
CLTCL1-203ENST00000449918 PPP1R12CQ9BZL4 782 aa20.13■□□□□ 0.81
CLTCL1-203ENST00000449918 HIPK3Q9H422 1215 aa20.13■□□□□ 0.81
CLTCL1-203ENST00000449918 PXMP2Q9NR77 195 aa20.13■□□□□ 0.81
CLTCL1-203ENST00000449918 OPLAHO14841 1288 aa20.12■□□□□ 0.81
CLTCL1-203ENST00000449918 SLC27A2O14975 620 aa20.12■□□□□ 0.81
CLTCL1-203ENST00000449918 PRC1O43663 620 aa20.12■□□□□ 0.81
CLTCL1-203ENST00000449918 DDAH1O94760 285 aa20.12■□□□□ 0.81
CLTCL1-203ENST00000449918 NR3C2P08235 984 aa20.12■□□□□ 0.81
CLTCL1-203ENST00000449918 SUPT20HL2P0C7V6 817 aa20.12■□□□□ 0.81
CLTCL1-203ENST00000449918 EIF2AK2P19525 551 aaKnown RBP20.12■□□□□ 0.81
CLTCL1-203ENST00000449918 NECTIN1Q15223 517 aa20.12■□□□□ 0.81
CLTCL1-203ENST00000449918 ZNF697Q5TEC3 545 aa20.12■□□□□ 0.81
CLTCL1-203ENST00000449918 CCDC62Q6P9F0 684 aa20.12■□□□□ 0.81
CLTCL1-203ENST00000449918 CTCFLQ8NI51 663 aaPredicted RBP20.12■□□□□ 0.81
CLTCL1-203ENST00000449918 COPS5Q92905 334 aa20.12■□□□□ 0.81
CLTCL1-203ENST00000449918 TMEM87BQ96K49 555 aa20.12■□□□□ 0.81
CLTCL1-203ENST00000449918 TRPV6Q9H1D0 765 aa20.12■□□□□ 0.81
CLTCL1-203ENST00000449918 ALDH8A1Q9H2A2 487 aaPredicted RBP20.12■□□□□ 0.81
CLTCL1-203ENST00000449918 LY9Q9HBG7 655 aa20.12■□□□□ 0.81
CLTCL1-203ENST00000449918 GCOM1H8Y6P7 765 aaPredicted RBP20.11■□□□□ 0.81
CLTCL1-203ENST00000449918 CYTH3O43739 400 aa20.11■□□□□ 0.81
CLTCL1-203ENST00000449918 B4GALT4O60513 344 aa20.11■□□□□ 0.81
CLTCL1-203ENST00000449918 ARIH2O95376 493 aa20.11■□□□□ 0.81
CLTCL1-203ENST00000449918 GH1P01241 217 aa20.11■□□□□ 0.81
CLTCL1-203ENST00000449918 POLR2MP0CAP2 368 aa20.11■□□□□ 0.81
CLTCL1-203ENST00000449918 CSF2RAP15509 400 aa20.11■□□□□ 0.81
CLTCL1-203ENST00000449918 SLC35G1Q2M3R5 365 aa20.11■□□□□ 0.81
CLTCL1-203ENST00000449918 RNF20Q5VTR2 975 aa20.11■□□□□ 0.81
CLTCL1-203ENST00000449918 CREB3L3Q68CJ9 461 aa20.11■□□□□ 0.81
CLTCL1-203ENST00000449918 NFXL1Q6ZNB6 911 aa20.11■□□□□ 0.81
CLTCL1-203ENST00000449918 ZNF654Q8IZM8 581 aa20.11■□□□□ 0.81
CLTCL1-203ENST00000449918 LZTS2Q9BRK4 669 aa20.11■□□□□ 0.81
CLTCL1-203ENST00000449918 STXBP5LQ9Y2K9 1186 aa20.11■□□□□ 0.81
CLTCL1-203ENST00000449918 CCDC69A6NI79 296 aa20.1■□□□□ 0.81
CLTCL1-203ENST00000449918 SMARCA1P28370 1054 aa20.1■□□□□ 0.81
CLTCL1-203ENST00000449918 CYP2C18P33260 490 aa20.1■□□□□ 0.81
CLTCL1-203ENST00000449918 GNAQP50148 359 aa20.1■□□□□ 0.81
CLTCL1-203ENST00000449918 LY6KQ17RY6 165 aa20.1■□□□□ 0.81
CLTCL1-203ENST00000449918 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.09■□□□□ 0.81
CLTCL1-203ENST00000449918 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.09■□□□□ 0.81
CLTCL1-203ENST00000449918 CALM1P0DP23 149 aa20.09■□□□□ 0.81
CLTCL1-203ENST00000449918 CALM2P0DP24 149 aa20.09■□□□□ 0.81
CLTCL1-203ENST00000449918 CALM3P0DP25 149 aa20.09■□□□□ 0.81
CLTCL1-203ENST00000449918 HOXA13P31271 388 aaPredicted RBP20.09■□□□□ 0.81
CLTCL1-203ENST00000449918 NFRKBQ6P4R8 1299 aa20.09■□□□□ 0.81
CLTCL1-203ENST00000449918 PSRC1Q6PGN9 363 aaPredicted RBP20.09■□□□□ 0.81
CLTCL1-203ENST00000449918 KCNV1Q6PIU1 500 aa20.09■□□□□ 0.81
CLTCL1-203ENST00000449918 AFG1LQ8WV93 481 aa20.09■□□□□ 0.81
CLTCL1-203ENST00000449918 RRP36Q96EU6 259 aaKnown RBP20.09■□□□□ 0.81
CLTCL1-203ENST00000449918 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.09■□□□□ 0.81
CLTCL1-203ENST00000449918 PDCD2LQ9BRP1 358 aa20.09■□□□□ 0.81
CLTCL1-203ENST00000449918 NOC4LQ9BVI4 516 aaKnown RBP20.09■□□□□ 0.81
CLTCL1-203ENST00000449918 MRVI1Q9Y6F6 885 aa20.09■□□□□ 0.81
CLTCL1-203ENST00000449918 SH2B2O14492 632 aaPredicted RBP20.08■□□□□ 0.81
CLTCL1-203ENST00000449918 MYCLP12524 364 aaPredicted RBP20.08■□□□□ 0.81
CLTCL1-203ENST00000449918 LIFRP42702 1097 aa20.08■□□□□ 0.81
CLTCL1-203ENST00000449918 PTPN11Q06124 597 aaPredicted RBP20.08■□□□□ 0.81
CLTCL1-203ENST00000449918 NBPF20Q3BBV1 942 aa20.08■□□□□ 0.81
CLTCL1-203ENST00000449918 FAM47CQ5HY64 1035 aa20.08■□□□□ 0.81
CLTCL1-203ENST00000449918 TMEM240Q5SV17 173 aa20.08■□□□□ 0.81
CLTCL1-203ENST00000449918 C16orf59Q7L2K0 433 aa20.08■□□□□ 0.81
CLTCL1-203ENST00000449918 VSIG10LQ86VR7 867 aa20.08■□□□□ 0.81
CLTCL1-203ENST00000449918 SKAP1Q86WV1 359 aa20.08■□□□□ 0.81
CLTCL1-203ENST00000449918 PIBF1Q8WXW3 757 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms