RNA–Protein interactions for RNA: ENST00000449457.1

LINC02561-201, Transcript of long intergenic non-protein coding RNA 2561, humanhuman

TSL 3 BASIC

Gene LINC02561, Length 692 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02561-201ENST00000449457 CCDC17Q96LX7 622 aa11.88□□□□□ -0.51
LINC02561-201ENST00000449457 C1QTNF1Q9BXJ1 281 aa11.88□□□□□ -0.51
LINC02561-201ENST00000449457 ABHD16BQ9H3Z7 469 aa11.88□□□□□ -0.51
LINC02561-201ENST00000449457 EPB41L4AQ9HCS5 686 aaPredicted RBP11.88□□□□□ -0.51
LINC02561-201ENST00000449457 A1CFQ9NQ94 594 aaKnown RBP11.88□□□□□ -0.51
LINC02561-201ENST00000449457 GNEQ9Y223 722 aaKnown RBP11.88□□□□□ -0.51
LINC02561-201ENST00000449457 C5orf42Q9H799 3197 aa11.88□□□□□ -0.51
LINC02561-201ENST00000449457 BRWD1Q9NSI6 2320 aa11.88□□□□□ -0.51
LINC02561-201ENST00000449457 MUC6Q6W4X9 2439 aa11.87□□□□□ -0.51
LINC02561-201ENST00000449457 SMAPO00193 183 aa11.87□□□□□ -0.51
LINC02561-201ENST00000449457 ERC2O15083 957 aa11.87□□□□□ -0.51
LINC02561-201ENST00000449457 TLL1O43897 1013 aa11.87□□□□□ -0.51
LINC02561-201ENST00000449457 SMARCA5O60264 1052 aaPredicted RBP11.87□□□□□ -0.51
LINC02561-201ENST00000449457 TAP1Q03518 808 aa11.87□□□□□ -0.51
LINC02561-201ENST00000449457 GRB10Q13322 594 aa11.87□□□□□ -0.51
LINC02561-201ENST00000449457 TCTN1Q2MV58 587 aa11.87□□□□□ -0.51
LINC02561-201ENST00000449457 TMEM31Q5JXX7 168 aa11.87□□□□□ -0.51
LINC02561-201ENST00000449457 CEP95Q96GE4 821 aa11.87□□□□□ -0.51
LINC02561-201ENST00000449457 ZBED2Q9BTP6 218 aa11.87□□□□□ -0.51
LINC02561-201ENST00000449457 MTIF3Q9H2K0 278 aaKnown RBP11.87□□□□□ -0.51
LINC02561-201ENST00000449457 SLC38A10Q9HBR0 1119 aa11.87□□□□□ -0.51
LINC02561-201ENST00000449457 ATP8A2Q9NTI2 1148 aa11.87□□□□□ -0.51
LINC02561-201ENST00000449457 RNF146Q9NTX7 359 aa11.87□□□□□ -0.51
LINC02561-201ENST00000449457 FAM217BQ9NTX9 383 aaPredicted RBP11.87□□□□□ -0.51
LINC02561-201ENST00000449457 PCDHA11Q9Y5I1 949 aa11.87□□□□□ -0.51
LINC02561-201ENST00000449457 ARHGAP33O14559 1287 aa11.86□□□□□ -0.51
LINC02561-201ENST00000449457 ZBED4O75132 1171 aa11.86□□□□□ -0.51
LINC02561-201ENST00000449457 MYL3P08590 195 aa11.86□□□□□ -0.51
LINC02561-201ENST00000449457 IFIT2P09913 472 aaKnown RBP11.86□□□□□ -0.51
LINC02561-201ENST00000449457 ALAS1P13196 640 aa11.86□□□□□ -0.51
LINC02561-201ENST00000449457 COPB2P35606 906 aa11.86□□□□□ -0.51
LINC02561-201ENST00000449457 FAM47CQ5HY64 1035 aa11.86□□□□□ -0.51
LINC02561-201ENST00000449457 TMEM67Q5HYA8 995 aa11.86□□□□□ -0.51
LINC02561-201ENST00000449457 MSL3Q8N5Y2 521 aaKnown RBP11.86□□□□□ -0.51
LINC02561-201ENST00000449457 FAM133AQ8N9E0 248 aa11.86□□□□□ -0.51
LINC02561-201ENST00000449457 COPS5Q92905 334 aa11.86□□□□□ -0.51
LINC02561-201ENST00000449457 ALDH8A1Q9H2A2 487 aaPredicted RBP11.86□□□□□ -0.51
LINC02561-201ENST00000449457 KIAA1468Q9P260 1216 aa11.86□□□□□ -0.51
LINC02561-201ENST00000449457 ZNF536O15090 1300 aa11.86□□□□□ -0.51
LINC02561-201ENST00000449457 IGKV6D-41A0A0C4DH26 115 aa11.85□□□□□ -0.51
LINC02561-201ENST00000449457 TMEM232C9JQI7 657 aa11.85□□□□□ -0.51
LINC02561-201ENST00000449457 LPXNO60711 386 aa11.85□□□□□ -0.51
LINC02561-201ENST00000449457 IKQ13123 557 aaPredicted RBP11.85□□□□□ -0.51
LINC02561-201ENST00000449457 DMRTA1Q5VZB9 504 aa11.85□□□□□ -0.51
LINC02561-201ENST00000449457 TAPT1Q6NXT6 567 aa11.85□□□□□ -0.51
LINC02561-201ENST00000449457 KCTD1Q719H9 257 aa11.85□□□□□ -0.51
LINC02561-201ENST00000449457 SIRT2Q8IXJ6 389 aa11.85□□□□□ -0.51
LINC02561-201ENST00000449457 PRPF38AQ8NAV1 312 aaKnown RBP11.85□□□□□ -0.51
LINC02561-201ENST00000449457 UIMC1Q96RL1 719 aa11.85□□□□□ -0.51
LINC02561-201ENST00000449457 TNKSO95271 1327 aa11.85□□□□□ -0.51
LINC02561-201ENST00000449457 M0R2C6 588 aa11.84□□□□□ -0.51
LINC02561-201ENST00000449457 IGSF3O75054 1194 aa11.84□□□□□ -0.51
LINC02561-201ENST00000449457 DEFB103AP81534 67 aa11.84□□□□□ -0.51
LINC02561-201ENST00000449457 SLFN13Q68D06 897 aa11.84□□□□□ -0.51
LINC02561-201ENST00000449457 FAM117BQ6P1L5 589 aa11.84□□□□□ -0.51
LINC02561-201ENST00000449457 NSMFQ6X4W1 530 aa11.84□□□□□ -0.51
LINC02561-201ENST00000449457 ERC1Q8IUD2 1116 aa11.84□□□□□ -0.51
LINC02561-201ENST00000449457 SPNS2Q8IVW8 549 aa11.84□□□□□ -0.51
LINC02561-201ENST00000449457 AMOTL1Q8IY63 956 aa11.84□□□□□ -0.51
LINC02561-201ENST00000449457 AP5M1Q9H0R1 490 aa11.84□□□□□ -0.51
LINC02561-201ENST00000449457 ACAD9Q9H845 621 aa11.84□□□□□ -0.51
LINC02561-201ENST00000449457 MKNK2Q9HBH9 465 aa11.84□□□□□ -0.51
LINC02561-201ENST00000449457 INCENPQ9NQS7 918 aa11.84□□□□□ -0.51
LINC02561-201ENST00000449457 NYAP2Q9P242 653 aa11.84□□□□□ -0.51
LINC02561-201ENST00000449457 COG6Q9Y2V7 657 aa11.84□□□□□ -0.51
LINC02561-201ENST00000449457 POTEB3A0JP26 581 aa11.83□□□□□ -0.52
LINC02561-201ENST00000449457 GSG1L2A8MUP6 293 aa11.83□□□□□ -0.52
LINC02561-201ENST00000449457 NMT2O60551 498 aa11.83□□□□□ -0.52
LINC02561-201ENST00000449457 IL9P15248 144 aa11.83□□□□□ -0.52
LINC02561-201ENST00000449457 POTEBQ6S5H4 581 aa11.83□□□□□ -0.52
LINC02561-201ENST00000449457 KIAA1211Q6ZU35 1233 aa11.83□□□□□ -0.52
LINC02561-201ENST00000449457 CLASRPQ8N2M8 674 aaKnown RBP11.83□□□□□ -0.52
LINC02561-201ENST00000449457 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.83□□□□□ -0.52
LINC02561-201ENST00000449457 HLA-CQ95604 372 aa11.83□□□□□ -0.52
LINC02561-201ENST00000449457 OSBP2Q969R2 916 aa11.83□□□□□ -0.52
LINC02561-201ENST00000449457 TRERF1Q96PN7 1200 aa11.83□□□□□ -0.52
LINC02561-201ENST00000449457 HAUS7Q99871 368 aa11.83□□□□□ -0.52
LINC02561-201ENST00000449457 FTOQ9C0B1 505 aaKnown RBP eCLIP11.83□□□□□ -0.52
LINC02561-201ENST00000449457 ARPP21Q9UBL0 812 aaPredicted RBP11.83□□□□□ -0.52
LINC02561-201ENST00000449457 TRIP12Q14669 1992 aaPredicted RBP11.82□□□□□ -0.52
LINC02561-201ENST00000449457 ATP2A1O14983 1001 aa11.82□□□□□ -0.52
LINC02561-201ENST00000449457 MCCP23508 829 aa11.82□□□□□ -0.52
LINC02561-201ENST00000449457 AAK1Q2M2I8 961 aa11.82□□□□□ -0.52
LINC02561-201ENST00000449457 SLC30A10Q6XR72 485 aa11.82□□□□□ -0.52
LINC02561-201ENST00000449457 HERC6Q8IVU3 1022 aa11.82□□□□□ -0.52
LINC02561-201ENST00000449457 ZNF687Q8N1G0 1237 aa11.82□□□□□ -0.52
LINC02561-201ENST00000449457 CHST13Q8NET6 341 aa11.82□□□□□ -0.52
LINC02561-201ENST00000449457 OR6J1Q8NGC5 347 aa11.82□□□□□ -0.52
LINC02561-201ENST00000449457 KIF1BPQ96EK5 621 aa11.82□□□□□ -0.52
LINC02561-201ENST00000449457 STRBPQ96SI9 672 aaKnown RBP11.82□□□□□ -0.52
LINC02561-201ENST00000449457 SEC62Q99442 399 aaKnown RBP11.82□□□□□ -0.52
LINC02561-201ENST00000449457 FEM1BQ9UK73 627 aa11.82□□□□□ -0.52
LINC02561-201ENST00000449457 SCN10AQ9Y5Y9 1956 aa11.81□□□□□ -0.52
LINC02561-201ENST00000449457 NFIBO00712 420 aa11.81□□□□□ -0.52
LINC02561-201ENST00000449457 CSPG5O95196 566 aa11.81□□□□□ -0.52
LINC02561-201ENST00000449457 BMP3P12645 472 aa11.81□□□□□ -0.52
LINC02561-201ENST00000449457 SLC16A2P36021 539 aa11.81□□□□□ -0.52
LINC02561-201ENST00000449457 TDO2P48775 406 aa11.81□□□□□ -0.52
LINC02561-201ENST00000449457 NKX3-2P78367 333 aa11.81□□□□□ -0.52
LINC02561-201ENST00000449457 PURAQ00577 322 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms