RNA–Protein interactions for RNA: ENST00000449246.5

TRAK1-206, Transcript of trafficking kinesin protein 1, humanhuman

TSL 1 (best) BASIC

Gene TRAK1, Length 3,260 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-206ENST00000449246 CADPS2Q86UW7 1296 aa13.07□□□□□ -0.32
TRAK1-206ENST00000449246 UBLCP1Q8WVY7 318 aaPredicted RBP13.07□□□□□ -0.32
TRAK1-206ENST00000449246 ATP6V1G3Q96LB4 118 aa13.07□□□□□ -0.32
TRAK1-206ENST00000449246 SLC39A2Q9NP94 309 aa13.07□□□□□ -0.32
TRAK1-206ENST00000449246 KIF1AQ12756 1690 aa13.07□□□□□ -0.32
TRAK1-206ENST00000449246 AKAP11Q9UKA4 1901 aa13.07□□□□□ -0.32
TRAK1-206ENST00000449246 FCER1AP12319 257 aa13.07□□□□□ -0.32
TRAK1-206ENST00000449246 ARFGAP2Q8N6H7 521 aa13.07□□□□□ -0.32
TRAK1-206ENST00000449246 RETREG2Q8NC44 543 aa13.07□□□□□ -0.32
TRAK1-206ENST00000449246 P2RX5Q93086 422 aa13.07□□□□□ -0.32
TRAK1-206ENST00000449246 VCPKMTQ9H867 229 aa13.07□□□□□ -0.32
TRAK1-206ENST00000449246 BICDL2A1A5D9 508 aa13.06□□□□□ -0.32
TRAK1-206ENST00000449246 NKRFO15226 690 aaKnown RBP eCLIP13.06□□□□□ -0.32
TRAK1-206ENST00000449246 KIF1CO43896 1103 aaKnown RBP13.06□□□□□ -0.32
TRAK1-206ENST00000449246 EPB41P11171 864 aaKnown RBP13.06□□□□□ -0.32
TRAK1-206ENST00000449246 CYP19A1P11511 503 aaPredicted RBP13.06□□□□□ -0.32
TRAK1-206ENST00000449246 GNAT2P19087 354 aa13.06□□□□□ -0.32
TRAK1-206ENST00000449246 CTNNA1P35221 906 aaKnown RBP13.06□□□□□ -0.32
TRAK1-206ENST00000449246 SMTNP53814 917 aa13.06□□□□□ -0.32
TRAK1-206ENST00000449246 BRINP3Q76B58 766 aa13.06□□□□□ -0.32
TRAK1-206ENST00000449246 TAF4BQ92750 862 aa13.06□□□□□ -0.32
TRAK1-206ENST00000449246 CYFIP2Q96F07 1278 aa13.06□□□□□ -0.32
TRAK1-206ENST00000449246 ZNF512BQ96KM6 892 aaPredicted RBP13.06□□□□□ -0.32
TRAK1-206ENST00000449246 LMTK3Q96Q04 1460 aa13.06□□□□□ -0.32
TRAK1-206ENST00000449246 LRRC53A6NM62 1247 aa13.06□□□□□ -0.32
TRAK1-206ENST00000449246 FAM107AO95990 144 aa13.06□□□□□ -0.32
TRAK1-206ENST00000449246 SLC1A4P43007 532 aa13.06□□□□□ -0.32
TRAK1-206ENST00000449246 STK4Q13043 487 aa13.06□□□□□ -0.32
TRAK1-206ENST00000449246 PARP9Q8IXQ6 854 aa13.06□□□□□ -0.32
TRAK1-206ENST00000449246 LONP1P36776 959 aaKnown RBP13.05□□□□□ -0.32
TRAK1-206ENST00000449246 INF2Q27J81 1249 aa13.05□□□□□ -0.32
TRAK1-206ENST00000449246 TTI2Q6NXR4 508 aa13.05□□□□□ -0.32
TRAK1-206ENST00000449246 MTMR8Q96EF0 704 aa13.05□□□□□ -0.32
TRAK1-206ENST00000449246 TCP11L1Q9NUJ3 509 aa13.05□□□□□ -0.32
TRAK1-206ENST00000449246 SALL4Q9UJQ4 1053 aa13.05□□□□□ -0.32
TRAK1-206ENST00000449246 FAM170AA1A519 330 aa13.05□□□□□ -0.32
TRAK1-206ENST00000449246 EPHB6O15197 1021 aa13.05□□□□□ -0.32
TRAK1-206ENST00000449246 SCG2P13521 617 aa13.05□□□□□ -0.32
TRAK1-206ENST00000449246 SEC23AQ15436 765 aa13.05□□□□□ -0.32
TRAK1-206ENST00000449246 PNMA8AQ86V59 439 aaPredicted RBP13.05□□□□□ -0.32
TRAK1-206ENST00000449246 IQCKQ8N0W5 287 aa13.05□□□□□ -0.32
TRAK1-206ENST00000449246 SRBD1Q8N5C6 995 aaKnown RBP13.05□□□□□ -0.32
TRAK1-206ENST00000449246 CAVIN3Q969G5 261 aa13.05□□□□□ -0.32
TRAK1-206ENST00000449246 TLR10Q9BXR5 811 aa13.05□□□□□ -0.32
TRAK1-206ENST00000449246 COL18A1P39060 1754 aa13.05□□□□□ -0.32
TRAK1-206ENST00000449246 NUP188Q5SRE5 1749 aa13.05□□□□□ -0.32
TRAK1-206ENST00000449246 RASSF10A6NK89 507 aa13.05□□□□□ -0.32
TRAK1-206ENST00000449246 PALMO75781 387 aa13.05□□□□□ -0.32
TRAK1-206ENST00000449246 CCNE1P24864 410 aa13.05□□□□□ -0.32
TRAK1-206ENST00000449246 IFFO1Q0D2I5 559 aa13.05□□□□□ -0.32
TRAK1-206ENST00000449246 MSL1Q68DK7 614 aa13.05□□□□□ -0.32
TRAK1-206ENST00000449246 CYB5D1Q6P9G0 228 aa13.05□□□□□ -0.32
TRAK1-206ENST00000449246 SMIM5Q71RC9 77 aa13.05□□□□□ -0.32
TRAK1-206ENST00000449246 DDX42Q86XP3 938 aaKnown RBP eCLIP13.05□□□□□ -0.32
TRAK1-206ENST00000449246 CACNA2D3Q8IZS8 1091 aa13.05□□□□□ -0.32
TRAK1-206ENST00000449246 DUSP9Q99956 384 aaKnown RBP13.05□□□□□ -0.32
TRAK1-206ENST00000449246 CARD10Q9BWT7 1032 aa13.05□□□□□ -0.32
TRAK1-206ENST00000449246 RBM28Q9NW13 759 aaKnown RBP13.05□□□□□ -0.32
TRAK1-206ENST00000449246 ALS2Q96Q42 1657 aa13.04□□□□□ -0.32
TRAK1-206ENST00000449246 MAGEB6P1A0A0J9YX57 407 aa13.04□□□□□ -0.32
TRAK1-206ENST00000449246 GMNCA6NCL1 334 aa13.04□□□□□ -0.32
TRAK1-206ENST00000449246 HMGB1P1B2RPK0 211 aaPredicted RBP13.04□□□□□ -0.32
TRAK1-206ENST00000449246 DDR1Q08345 913 aa13.04□□□□□ -0.32
TRAK1-206ENST00000449246 PPP1R7Q15435 360 aa13.04□□□□□ -0.32
TRAK1-206ENST00000449246 DYMQ7RTS9 669 aa13.04□□□□□ -0.32
TRAK1-206ENST00000449246 CASKIN2Q8WXE0 1202 aa13.04□□□□□ -0.32
TRAK1-206ENST00000449246 SPEF2Q9C093 1822 aa13.04□□□□□ -0.32
TRAK1-206ENST00000449246 ATRNO75882 1429 aa13.04□□□□□ -0.32
TRAK1-206ENST00000449246 TMCO5BA8MYB1 307 aa13.04□□□□□ -0.32
TRAK1-206ENST00000449246 USP17L12C9JPN9 530 aa13.04□□□□□ -0.32
TRAK1-206ENST00000449246 USP17L21D6R901 530 aa13.04□□□□□ -0.32
TRAK1-206ENST00000449246 PAX7P23759 505 aa13.04□□□□□ -0.32
TRAK1-206ENST00000449246 CHRNDQ07001 517 aa13.04□□□□□ -0.32
TRAK1-206ENST00000449246 PPP2R5BQ15173 497 aa13.04□□□□□ -0.32
TRAK1-206ENST00000449246 CCDC155Q8N6L0 562 aa13.04□□□□□ -0.32
TRAK1-206ENST00000449246 DHTKD1Q96HY7 919 aaPredicted RBP13.04□□□□□ -0.32
TRAK1-206ENST00000449246 NDST4Q9H3R1 872 aa13.04□□□□□ -0.32
TRAK1-206ENST00000449246 PLAGL2Q9UPG8 496 aa13.04□□□□□ -0.32
TRAK1-206ENST00000449246 MROH5Q6ZUA9 1318 aa13.04□□□□□ -0.32
TRAK1-206ENST00000449246 A0A1B0GUA9 196 aa13.03□□□□□ -0.32
TRAK1-206ENST00000449246 SMIM23A6NLE4 172 aa13.03□□□□□ -0.32
TRAK1-206ENST00000449246 KCNK3O14649 394 aa13.03□□□□□ -0.32
TRAK1-206ENST00000449246 SKAP2O75563 359 aaPredicted RBP13.03□□□□□ -0.32
TRAK1-206ENST00000449246 GIMAP8Q8ND71 665 aaPredicted RBP13.03□□□□□ -0.32
TRAK1-206ENST00000449246 TRIM31Q9BZY9 425 aa13.03□□□□□ -0.32
TRAK1-206ENST00000449246 TMEM60Q9H2L4 133 aa13.03□□□□□ -0.32
TRAK1-206ENST00000449246 NOVA2Q9UNW9 492 aaKnown RBP13.03□□□□□ -0.32
TRAK1-206ENST00000449246 PHF20L1A8MW92 1017 aa13.03□□□□□ -0.32
TRAK1-206ENST00000449246 CEP104O60308 925 aa13.03□□□□□ -0.32
TRAK1-206ENST00000449246 PDE6BP35913 854 aa13.03□□□□□ -0.32
TRAK1-206ENST00000449246 FUT2Q10981 343 aa13.03□□□□□ -0.32
TRAK1-206ENST00000449246 NPY5RQ15761 445 aa13.03□□□□□ -0.32
TRAK1-206ENST00000449246 HIBCHQ6NVY1 386 aaPredicted RBP13.03□□□□□ -0.32
TRAK1-206ENST00000449246 TMTC3Q6ZXV5 915 aa13.03□□□□□ -0.32
TRAK1-206ENST00000449246 BLIDQ8IZY5 108 aa13.03□□□□□ -0.32
TRAK1-206ENST00000449246 PURBQ96QR8 312 aaKnown RBP13.03□□□□□ -0.32
TRAK1-206ENST00000449246 TTYH3Q9C0H2 523 aa13.03□□□□□ -0.32
TRAK1-206ENST00000449246 LUC7LQ9NQ29 371 aaKnown RBP13.03□□□□□ -0.32
TRAK1-206ENST00000449246 OPLAHO14841 1288 aa13.03□□□□□ -0.32
TRAK1-206ENST00000449246 CLTAP09496 248 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms