RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 LAD1O00515 517 aa21.93■■□□□ 1.1
RPS28-202ENST00000449223 PRPF40AO75400 957 aaKnown RBP21.93■■□□□ 1.1
RPS28-202ENST00000449223 ERCC3P19447 782 aa21.93■■□□□ 1.1
RPS28-202ENST00000449223 CIITAP33076 1130 aa21.93■■□□□ 1.1
RPS28-202ENST00000449223 ARHGAP4P98171 946 aa21.93■■□□□ 1.1
RPS28-202ENST00000449223 ATP2C1P98194 919 aaPredicted RBP21.93■■□□□ 1.1
RPS28-202ENST00000449223 LETM2Q2VYF4 491 aa21.93■■□□□ 1.1
RPS28-202ENST00000449223 SLC30A10Q6XR72 485 aa21.93■■□□□ 1.1
RPS28-202ENST00000449223 C4orf32Q8N8J7 132 aa21.93■■□□□ 1.1
RPS28-202ENST00000449223 JMYQ8N9B5 988 aa21.93■■□□□ 1.1
RPS28-202ENST00000449223 THSD7BQ9C0I4 1608 aa21.92■■□□□ 1.1
RPS28-202ENST00000449223 PEX10O60683 326 aa21.92■■□□□ 1.1
RPS28-202ENST00000449223 CCNA1P78396 465 aa21.92■■□□□ 1.1
RPS28-202ENST00000449223 CCNT1O60563 726 aaKnown RBP21.91■■□□□ 1.1
RPS28-202ENST00000449223 ATP2B1P20020 1258 aa21.91■■□□□ 1.1
RPS28-202ENST00000449223 UBE2HP62256 183 aa21.91■■□□□ 1.1
RPS28-202ENST00000449223 BAATQ14032 418 aaPredicted RBP21.91■■□□□ 1.1
RPS28-202ENST00000449223 ZNF174Q15697 407 aa21.91■■□□□ 1.1
RPS28-202ENST00000449223 ARL6IP4Q66PJ3 421 aaKnown RBP21.91■■□□□ 1.1
RPS28-202ENST00000449223 NSMFQ6X4W1 530 aa21.91■■□□□ 1.1
RPS28-202ENST00000449223 FCHSD1Q86WN1 690 aa21.91■■□□□ 1.1
RPS28-202ENST00000449223 CAPNS2Q96L46 248 aa21.91■■□□□ 1.1
RPS28-202ENST00000449223 BCRP11274 1271 aa21.9■■□□□ 1.1
RPS28-202ENST00000449223 MCM7P33993 719 aa21.9■■□□□ 1.1
RPS28-202ENST00000449223 PRPHP41219 470 aa21.9■■□□□ 1.1
RPS28-202ENST00000449223 TAF1CQ15572 869 aaPredicted RBP21.9■■□□□ 1.1
RPS28-202ENST00000449223 NCAPG2Q86XI2 1143 aa21.9■■□□□ 1.1
RPS28-202ENST00000449223 ANKRD13CQ8N6S4 541 aa21.9■■□□□ 1.1
RPS28-202ENST00000449223 ZIC5Q96T25 663 aa21.9■■□□□ 1.1
RPS28-202ENST00000449223 PCDHA7Q9UN72 937 aa21.9■■□□□ 1.1
RPS28-202ENST00000449223 TLR2O60603 784 aa21.9■■□□□ 1.1
RPS28-202ENST00000449223 ALDH1A1P00352 501 aa21.9■■□□□ 1.1
RPS28-202ENST00000449223 PTPREP23469 700 aa21.9■■□□□ 1.1
RPS28-202ENST00000449223 PTGDRQ13258 359 aa21.9■■□□□ 1.1
RPS28-202ENST00000449223 AXDND1Q5T1B0 1012 aaPredicted RBP21.9■■□□□ 1.1
RPS28-202ENST00000449223 ADALQ6DHV7 355 aa21.9■■□□□ 1.1
RPS28-202ENST00000449223 SRPRBQ9Y5M8 271 aaKnown RBP21.9■■□□□ 1.1
RPS28-202ENST00000449223 ZNF236Q9UL36 1845 aa21.89■■□□□ 1.1
RPS28-202ENST00000449223 A0A1W2PQ27 194 aa21.89■■□□□ 1.09
RPS28-202ENST00000449223 A0A1W2PQ64 194 aa21.89■■□□□ 1.09
RPS28-202ENST00000449223 A0A1W2PQD8 194 aa21.89■■□□□ 1.09
RPS28-202ENST00000449223 NEMFO60524 1076 aa21.89■■□□□ 1.09
RPS28-202ENST00000449223 Q4G0T1 1027 aa21.89■■□□□ 1.09
RPS28-202ENST00000449223 XRRA1Q6P2D8 792 aa21.89■■□□□ 1.09
RPS28-202ENST00000449223 DNERQ8NFT8 737 aa21.89■■□□□ 1.09
RPS28-202ENST00000449223 FERMT2Q96AC1 680 aa21.89■■□□□ 1.09
RPS28-202ENST00000449223 FBXO2Q9UK22 296 aaPredicted RBP21.89■■□□□ 1.09
RPS28-202ENST00000449223 PLXNB2O15031 1838 aa21.89■■□□□ 1.09
RPS28-202ENST00000449223 GADD45BO75293 160 aaPredicted RBP21.88■■□□□ 1.09
RPS28-202ENST00000449223 TDP2O95551 362 aa21.88■■□□□ 1.09
RPS28-202ENST00000449223 ME1P48163 572 aa21.88■■□□□ 1.09
RPS28-202ENST00000449223 PCNX4Q63HM2 1172 aa21.88■■□□□ 1.09
RPS28-202ENST00000449223 C17orf99Q6UX52 265 aa21.88■■□□□ 1.09
RPS28-202ENST00000449223 PAXIP1Q6ZW49 1069 aaPredicted RBP21.88■■□□□ 1.09
RPS28-202ENST00000449223 ABRAQ8N0Z2 381 aa21.88■■□□□ 1.09
RPS28-202ENST00000449223 ANKRD35Q8N283 1001 aa21.88■■□□□ 1.09
RPS28-202ENST00000449223 KRI1Q8N9T8 703 aaKnown RBP21.88■■□□□ 1.09
RPS28-202ENST00000449223 ZNF579Q8NAF0 562 aaKnown RBP21.88■■□□□ 1.09
RPS28-202ENST00000449223 TAAR1Q96RJ0 339 aa21.88■■□□□ 1.09
RPS28-202ENST00000449223 RMDN3Q96TC7 470 aa21.88■■□□□ 1.09
RPS28-202ENST00000449223 PORCNQ9H237 461 aa21.88■■□□□ 1.09
RPS28-202ENST00000449223 PXMP2Q9NR77 195 aa21.88■■□□□ 1.09
RPS28-202ENST00000449223 ZNFX1Q9P2E3 1918 aaKnown RBP21.88■■□□□ 1.09
RPS28-202ENST00000449223 DNAJC25-GNG10A0A024R161 153 aa21.87■■□□□ 1.09
RPS28-202ENST00000449223 CUTAO60888 179 aa21.87■■□□□ 1.09
RPS28-202ENST00000449223 LENG9Q96B70 501 aa21.87■■□□□ 1.09
RPS28-202ENST00000449223 MTMR9Q96QG7 549 aa21.87■■□□□ 1.09
RPS28-202ENST00000449223 PDCD2LQ9BRP1 358 aa21.87■■□□□ 1.09
RPS28-202ENST00000449223 ZFYVE28Q9HCC9 887 aa21.87■■□□□ 1.09
RPS28-202ENST00000449223 DDX25Q9UHL0 483 aaKnown RBP21.87■■□□□ 1.09
RPS28-202ENST00000449223 FAM86B1E9PN63 330 aa21.86■■□□□ 1.09
RPS28-202ENST00000449223 CA12O43570 354 aa21.86■■□□□ 1.09
RPS28-202ENST00000449223 SLC37A4O43826 429 aa21.86■■□□□ 1.09
RPS28-202ENST00000449223 FAM86B2P0C5J1 330 aa21.86■■□□□ 1.09
RPS28-202ENST00000449223 MARCKSP29966 332 aaPredicted RBP21.86■■□□□ 1.09
RPS28-202ENST00000449223 MAP2K2P36507 400 aa21.86■■□□□ 1.09
RPS28-202ENST00000449223 PGM5Q15124 567 aa21.86■■□□□ 1.09
RPS28-202ENST00000449223 SKOR2Q2VWA4 1001 aaPredicted RBP21.86■■□□□ 1.09
RPS28-202ENST00000449223 FAM133AQ8N9E0 248 aa21.86■■□□□ 1.09
RPS28-202ENST00000449223 NSUN6Q8TEA1 469 aaKnown RBP21.86■■□□□ 1.09
RPS28-202ENST00000449223 TMEM60Q9H2L4 133 aa21.86■■□□□ 1.09
RPS28-202ENST00000449223 R3HDMLQ9H3Y0 253 aa21.86■■□□□ 1.09
RPS28-202ENST00000449223 KCNMB3Q9NPA1 279 aa21.86■■□□□ 1.09
RPS28-202ENST00000449223 IGLV3-22A0A075B6J6 115 aa21.85■■□□□ 1.09
RPS28-202ENST00000449223 LOC102724159A0A0B4J2E5 919 aa21.85■■□□□ 1.09
RPS28-202ENST00000449223 TBX3O15119 743 aa21.85■■□□□ 1.09
RPS28-202ENST00000449223 STRNO43815 780 aa21.85■■□□□ 1.09
RPS28-202ENST00000449223 MBD3O95983 291 aa21.85■■□□□ 1.09
RPS28-202ENST00000449223 OR52Z1P0C646 297 aa21.85■■□□□ 1.09
RPS28-202ENST00000449223 FCER1AP12319 257 aa21.85■■□□□ 1.09
RPS28-202ENST00000449223 MAPK4P31152 587 aa21.85■■□□□ 1.09
RPS28-202ENST00000449223 PWP2Q15269 919 aaKnown RBP21.85■■□□□ 1.09
RPS28-202ENST00000449223 NIPA1Q7RTP0 329 aa21.85■■□□□ 1.09
RPS28-202ENST00000449223 POTEDQ86YR6 584 aa21.85■■□□□ 1.09
RPS28-202ENST00000449223 CFHR5Q9BXR6 569 aa21.85■■□□□ 1.09
RPS28-202ENST00000449223 EFCC1Q9HA90 598 aa21.85■■□□□ 1.09
RPS28-202ENST00000449223 LRRC37A2A6NM11 1700 aa21.85■■□□□ 1.09
RPS28-202ENST00000449223 AOC2O75106 756 aa21.85■■□□□ 1.09
RPS28-202ENST00000449223 CRHR2Q13324 411 aa21.85■■□□□ 1.09
RPS28-202ENST00000449223 KCTD2Q14681 263 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms