RNA–Protein interactions for RNA: ENST00000448217.2

SCAP-208, Transcript of SREBF chaperone, human

TSL 4

Gene SCAP, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAP-208	ENST00000448217	AOC2	O75106	756 aa		13.57	□□□□□ -0.24
SCAP-208	ENST00000448217	MCM4	P33991	863 aa		13.57	□□□□□ -0.24
SCAP-208	ENST00000448217	ARHGAP4	P98171	946 aa		13.57	□□□□□ -0.24
SCAP-208	ENST00000448217	SF3A1	Q15459	793 aa	Known RBP	13.57	□□□□□ -0.24
SCAP-208	ENST00000448217	NSMF	Q6X4W1	530 aa		13.57	□□□□□ -0.24
SCAP-208	ENST00000448217	SLC30A10	Q6XR72	485 aa		13.57	□□□□□ -0.24
SCAP-208	ENST00000448217	NCAPG2	Q86XI2	1143 aa		13.57	□□□□□ -0.24
SCAP-208	ENST00000448217	DNER	Q8NFT8	737 aa		13.57	□□□□□ -0.24
SCAP-208	ENST00000448217	LEO1	Q8WVC0	666 aa	Predicted RBP	13.57	□□□□□ -0.24
SCAP-208	ENST00000448217	CHAMP1	Q96JM3	812 aa		13.57	□□□□□ -0.24
SCAP-208	ENST00000448217	TFIP11	Q9UBB9	837 aa	Known RBP	13.57	□□□□□ -0.24
SCAP-208	ENST00000448217	PCDHB6	Q9Y5E3	794 aa		13.57	□□□□□ -0.24
SCAP-208	ENST00000448217	CLIC4	Q9Y696	253 aa		13.57	□□□□□ -0.24
SCAP-208	ENST00000448217	PLXNB2	O15031	1838 aa		13.56	□□□□□ -0.24
SCAP-208	ENST00000448217	GOLGA6L22	H0YM25	854 aa		13.56	□□□□□ -0.24
SCAP-208	ENST00000448217	LAD1	O00515	517 aa		13.56	□□□□□ -0.24
SCAP-208	ENST00000448217	WNT7A	O00755	349 aa		13.56	□□□□□ -0.24
SCAP-208	ENST00000448217	PPP6R2	O75170	966 aa		13.56	□□□□□ -0.24
SCAP-208	ENST00000448217	MAPK4	P31152	587 aa		13.56	□□□□□ -0.24
SCAP-208	ENST00000448217	VEGFB	P49765	207 aa		13.56	□□□□□ -0.24
SCAP-208	ENST00000448217	CRHR2	Q13324	411 aa		13.56	□□□□□ -0.24
SCAP-208	ENST00000448217	FCHSD1	Q86WN1	690 aa		13.56	□□□□□ -0.24
SCAP-208	ENST00000448217	C4orf32	Q8N8J7	132 aa		13.56	□□□□□ -0.24
SCAP-208	ENST00000448217	FAM133A	Q8N9E0	248 aa		13.56	□□□□□ -0.24
SCAP-208	ENST00000448217	KCNG4	Q8TDN1	519 aa		13.56	□□□□□ -0.24
SCAP-208	ENST00000448217	SPATA32	Q96LK8	384 aa		13.56	□□□□□ -0.24
SCAP-208	ENST00000448217	PORCN	Q9H237	461 aa		13.56	□□□□□ -0.24
SCAP-208	ENST00000448217	SPTLC2	O15270	562 aa		13.55	□□□□□ -0.24
SCAP-208	ENST00000448217	FCER1A	P12319	257 aa		13.55	□□□□□ -0.24
SCAP-208	ENST00000448217	PTMS	P20962	102 aa		13.55	□□□□□ -0.24
SCAP-208	ENST00000448217	PRPH	P41219	470 aa		13.55	□□□□□ -0.24
SCAP-208	ENST00000448217	ATP2C1	P98194	919 aa	Predicted RBP	13.55	□□□□□ -0.24
SCAP-208	ENST00000448217	KCTD2	Q14681	263 aa		13.55	□□□□□ -0.24
SCAP-208	ENST00000448217	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.55	□□□□□ -0.24
SCAP-208	ENST00000448217		Q4G0T1	1027 aa		13.55	□□□□□ -0.24
SCAP-208	ENST00000448217	PCNX4	Q63HM2	1172 aa		13.55	□□□□□ -0.24
SCAP-208	ENST00000448217	ARL6IP4	Q66PJ3	421 aa	Known RBP	13.55	□□□□□ -0.24
SCAP-208	ENST00000448217	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.55	□□□□□ -0.24
SCAP-208	ENST00000448217	NIPA1	Q7RTP0	329 aa		13.55	□□□□□ -0.24
SCAP-208	ENST00000448217	ANKRD35	Q8N283	1001 aa		13.55	□□□□□ -0.24
SCAP-208	ENST00000448217	JMY	Q8N9B5	988 aa		13.55	□□□□□ -0.24
SCAP-208	ENST00000448217	NSUN6	Q8TEA1	469 aa	Known RBP	13.55	□□□□□ -0.24
SCAP-208	ENST00000448217	PGBD1	Q96JS3	809 aa		13.55	□□□□□ -0.24
SCAP-208	ENST00000448217	TAAR1	Q96RJ0	339 aa		13.55	□□□□□ -0.24
SCAP-208	ENST00000448217	IWS1	Q96ST2	819 aa		13.55	□□□□□ -0.24
SCAP-208	ENST00000448217	FTO	Q9C0B1	505 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
SCAP-208	ENST00000448217	R3HDML	Q9H3Y0	253 aa		13.55	□□□□□ -0.24
SCAP-208	ENST00000448217	EFCC1	Q9HA90	598 aa		13.55	□□□□□ -0.24
SCAP-208	ENST00000448217	PXMP2	Q9NR77	195 aa		13.55	□□□□□ -0.24
SCAP-208	ENST00000448217	DDX11L8	A8MPP1	907 aa		13.54	□□□□□ -0.24
SCAP-208	ENST00000448217	FIBP	O43427	364 aa		13.54	□□□□□ -0.24
SCAP-208	ENST00000448217	STAM2	O75886	525 aa		13.54	□□□□□ -0.24
SCAP-208	ENST00000448217	HSPA6	P17066	643 aa		13.54	□□□□□ -0.24
SCAP-208	ENST00000448217	NCL	P19338	710 aa	Known RBP	13.54	□□□□□ -0.24
SCAP-208	ENST00000448217	EDNRB	P24530	442 aa		13.54	□□□□□ -0.24
SCAP-208	ENST00000448217	GRB14	Q14449	540 aa		13.54	□□□□□ -0.24
SCAP-208	ENST00000448217	NBR1	Q14596	966 aa		13.54	□□□□□ -0.24
SCAP-208	ENST00000448217	STK38	Q15208	465 aa		13.54	□□□□□ -0.24
SCAP-208	ENST00000448217	LETM2	Q2VYF4	491 aa		13.54	□□□□□ -0.24
SCAP-208	ENST00000448217	RMDN3	Q96TC7	470 aa		13.54	□□□□□ -0.24
SCAP-208	ENST00000448217	MMP19	Q99542	508 aa		13.54	□□□□□ -0.24
SCAP-208	ENST00000448217	PDCD2L	Q9BRP1	358 aa		13.54	□□□□□ -0.24
SCAP-208	ENST00000448217	LMBRD1	Q9NUN5	540 aa		13.54	□□□□□ -0.24
SCAP-208	ENST00000448217	ADD3	Q9UEY8	706 aa	Known RBP	13.54	□□□□□ -0.24
SCAP-208	ENST00000448217	CPA4	Q9UI42	421 aa		13.54	□□□□□ -0.24
SCAP-208	ENST00000448217	MGAM	O43451	1857 aa		13.54	□□□□□ -0.24
SCAP-208	ENST00000448217	PLXNA1	Q9UIW2	1896 aa		13.54	□□□□□ -0.24
SCAP-208	ENST00000448217	DOCK3	Q8IZD9	2030 aa		13.54	□□□□□ -0.24
SCAP-208	ENST00000448217	IGLV3-22	A0A075B6J6	115 aa		13.53	□□□□□ -0.24
SCAP-208	ENST00000448217	SLC15A5	A6NIM6	579 aa		13.53	□□□□□ -0.24
SCAP-208	ENST00000448217	POTEB2	H3BUK9	544 aa		13.53	□□□□□ -0.24
SCAP-208	ENST00000448217	MEIS1	O00470	390 aa		13.53	□□□□□ -0.24
SCAP-208	ENST00000448217	TBX3	O15119	743 aa		13.53	□□□□□ -0.24
SCAP-208	ENST00000448217	CCNT1	O60563	726 aa	Known RBP	13.53	□□□□□ -0.24
SCAP-208	ENST00000448217	ATP2B1	P20020	1258 aa		13.53	□□□□□ -0.24
SCAP-208	ENST00000448217	PTPRE	P23469	700 aa		13.53	□□□□□ -0.24
SCAP-208	ENST00000448217	C1QTNF8	P60827	252 aa		13.53	□□□□□ -0.24
SCAP-208	ENST00000448217	GRM1	Q13255	1194 aa		13.53	□□□□□ -0.24
SCAP-208	ENST00000448217	PTGDR	Q13258	359 aa		13.53	□□□□□ -0.24
SCAP-208	ENST00000448217	PGM5	Q15124	567 aa		13.53	□□□□□ -0.24
SCAP-208	ENST00000448217	ZNF174	Q15697	407 aa		13.53	□□□□□ -0.24
SCAP-208	ENST00000448217	AXDND1	Q5T1B0	1012 aa	Predicted RBP	13.53	□□□□□ -0.24
SCAP-208	ENST00000448217	GPR142	Q7Z601	462 aa		13.53	□□□□□ -0.24
SCAP-208	ENST00000448217	PLEKHH3	Q7Z736	793 aa		13.53	□□□□□ -0.24
SCAP-208	ENST00000448217	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.53	□□□□□ -0.24
SCAP-208	ENST00000448217	VSIG10L	Q86VR7	867 aa		13.53	□□□□□ -0.24
SCAP-208	ENST00000448217	ZNF579	Q8NAF0	562 aa	Known RBP	13.53	□□□□□ -0.24
SCAP-208	ENST00000448217	MORC4	Q8TE76	937 aa		13.53	□□□□□ -0.24
SCAP-208	ENST00000448217	FERMT2	Q96AC1	680 aa		13.53	□□□□□ -0.24
SCAP-208	ENST00000448217	LENG9	Q96B70	501 aa		13.53	□□□□□ -0.24
SCAP-208	ENST00000448217	MTMR9	Q96QG7	549 aa		13.53	□□□□□ -0.24
SCAP-208	ENST00000448217	DIS3	Q9Y2L1	958 aa	Known RBP	13.53	□□□□□ -0.24
SCAP-208	ENST00000448217	SRPRB	Q9Y5M8	271 aa	Known RBP	13.53	□□□□□ -0.24
SCAP-208	ENST00000448217	UBIAD1	Q9Y5Z9	338 aa		13.53	□□□□□ -0.24
SCAP-208	ENST00000448217		A0A1W2PQ27	194 aa		13.52	□□□□□ -0.25
SCAP-208	ENST00000448217		A0A1W2PQ64	194 aa		13.52	□□□□□ -0.25
SCAP-208	ENST00000448217		A0A1W2PQD8	194 aa		13.52	□□□□□ -0.25
SCAP-208	ENST00000448217	SOWAHB	A6NEL2	793 aa		13.52	□□□□□ -0.25
SCAP-208	ENST00000448217		B4DLN1	442 aa		13.52	□□□□□ -0.25
SCAP-208	ENST00000448217	FAM86B1	E9PN63	330 aa		13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms