RNA–Protein interactions for RNA: ENST00000447868.5

UFD1-204, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-204ENST00000447868 GNEQ9Y223 722 aaKnown RBP28.87■■■□□ 2.21
UFD1-204ENST00000447868 CYP46A1Q9Y6A2 500 aa28.87■■■□□ 2.21
UFD1-204ENST00000447868 KCNA10Q16322 511 aa28.86■■■□□ 2.21
UFD1-204ENST00000447868 TLK2Q86UE8 772 aa28.86■■■□□ 2.21
UFD1-204ENST00000447868 FCHSD1Q86WN1 690 aa28.86■■■□□ 2.21
UFD1-204ENST00000447868 WDR11Q9BZH6 1224 aa28.86■■■□□ 2.21
UFD1-204ENST00000447868 AP5M1Q9H0R1 490 aa28.86■■■□□ 2.21
UFD1-204ENST00000447868 CNTNAP5Q8WYK1 1306 aa28.86■■■□□ 2.21
UFD1-204ENST00000447868 DYNC1LI2O43237 492 aaPredicted RBP28.85■■■□□ 2.21
UFD1-204ENST00000447868 CDC27P30260 824 aa28.85■■■□□ 2.21
UFD1-204ENST00000447868 METAP2P50579 478 aaKnown RBP eCLIP28.85■■■□□ 2.21
UFD1-204ENST00000447868 SLC39A5Q6ZMH5 540 aa28.85■■■□□ 2.21
UFD1-204ENST00000447868 SAMD3Q8N6K7 520 aa28.85■■■□□ 2.21
UFD1-204ENST00000447868 IWS1Q96ST2 819 aa28.85■■■□□ 2.21
UFD1-204ENST00000447868 TSEN34Q9BSV6 310 aaKnown RBP28.85■■■□□ 2.21
UFD1-204ENST00000447868 UPF3BQ9BZI7 483 aaKnown RBP28.85■■■□□ 2.21
UFD1-204ENST00000447868 FAM217BQ9NTX9 383 aaPredicted RBP28.85■■■□□ 2.21
UFD1-204ENST00000447868 A0A1W2PQ45 241 aaPredicted RBP28.84■■■□□ 2.21
UFD1-204ENST00000447868 A0A1W2PQY0 241 aa28.84■■■□□ 2.21
UFD1-204ENST00000447868 RBM47A0AV96 593 aaKnown RBP28.84■■■□□ 2.21
UFD1-204ENST00000447868 ACLYP53396 1101 aa28.84■■■□□ 2.21
UFD1-204ENST00000447868 RCAN1P53805 252 aa28.84■■■□□ 2.21
UFD1-204ENST00000447868 BEX3Q00994 111 aa28.84■■■□□ 2.21
UFD1-204ENST00000447868 GNASQ5JWF2 1037 aa28.84■■■□□ 2.21
UFD1-204ENST00000447868 CCSAPQ6IQ19 270 aaPredicted RBP28.84■■■□□ 2.21
UFD1-204ENST00000447868 FBXL16Q8N461 479 aa28.84■■■□□ 2.21
UFD1-204ENST00000447868 AGXT2Q9BYV1 514 aa28.84■■■□□ 2.21
UFD1-204ENST00000447868 TM6SF1Q9BZW5 370 aa28.84■■■□□ 2.21
UFD1-204ENST00000447868 CTAGE5O15320 804 aa28.83■■■□□ 2.21
UFD1-204ENST00000447868 CST5P28325 142 aaPredicted RBP28.83■■■□□ 2.21
UFD1-204ENST00000447868 RTP1P59025 263 aa28.83■■■□□ 2.21
UFD1-204ENST00000447868 STXBP2Q15833 593 aa28.83■■■□□ 2.21
UFD1-204ENST00000447868 DUSP28Q4G0W2 176 aa28.83■■■□□ 2.21
UFD1-204ENST00000447868 HEATR3Q7Z4Q2 680 aa28.83■■■□□ 2.21
UFD1-204ENST00000447868 PCSK9Q8NBP7 692 aaKnown RBP28.83■■■□□ 2.21
UFD1-204ENST00000447868 GPKOWQ92917 476 aaPredicted RBP eCLIP28.83■■■□□ 2.213e-7■■□□□ 12.2
UFD1-204ENST00000447868 ZMYND8Q9ULU4 1186 aaPredicted RBP28.83■■■□□ 2.21
UFD1-204ENST00000447868 MOXD2PA6NHM9 499 aa28.82■■■□□ 2.2
UFD1-204ENST00000447868 NR3C2P08235 984 aa28.82■■■□□ 2.2
UFD1-204ENST00000447868 MYCLP12524 364 aaPredicted RBP28.82■■■□□ 2.2
UFD1-204ENST00000447868 ADD1P35611 737 aaKnown RBP28.82■■■□□ 2.2
UFD1-204ENST00000447868 FUT2Q10981 343 aa28.82■■■□□ 2.2
UFD1-204ENST00000447868 SEPT14Q6ZU15 432 aa28.82■■■□□ 2.2
UFD1-204ENST00000447868 SCFD2Q8WU76 684 aa28.82■■■□□ 2.2
UFD1-204ENST00000447868 ATP11BQ9Y2G3 1177 aa28.82■■■□□ 2.2
UFD1-204ENST00000447868 V9GY48 417 aaPredicted RBP28.82■■■□□ 2.2
UFD1-204ENST00000447868 CEP290O15078 2479 aa28.81■■■□□ 2.2
UFD1-204ENST00000447868 ASGR1P07306 291 aa28.81■■■□□ 2.2
UFD1-204ENST00000447868 SYN1P17600 705 aa28.81■■■□□ 2.2
UFD1-204ENST00000447868 TOB2Q14106 344 aaPredicted RBP28.81■■■□□ 2.2
UFD1-204ENST00000447868 PPP2R5BQ15173 497 aa28.81■■■□□ 2.2
UFD1-204ENST00000447868 FSCN1Q16658 493 aaKnown RBP28.81■■■□□ 2.2
UFD1-204ENST00000447868 SMARCC2Q8TAQ2 1214 aa28.81■■■□□ 2.2
UFD1-204ENST00000447868 CUL5Q93034 780 aa28.81■■■□□ 2.2
UFD1-204ENST00000447868 PDCD2LQ9BRP1 358 aa28.81■■■□□ 2.2
UFD1-204ENST00000447868 Q9Y3F1 56 aa28.81■■■□□ 2.2
UFD1-204ENST00000447868 CCDC196A0A1B0GTZ2 297 aa28.8■■■□□ 2.2
UFD1-204ENST00000447868 SEC24BO95487 1268 aa28.8■■■□□ 2.2
UFD1-204ENST00000447868 TRIM60Q495X7 471 aa28.8■■■□□ 2.2
UFD1-204ENST00000447868 USP17L6PQ6QN14 398 aa28.8■■■□□ 2.2
UFD1-204ENST00000447868 STARD7Q9NQZ5 370 aa28.8■■■□□ 2.2
UFD1-204ENST00000447868 PDRG1Q9NUG6 133 aa28.8■■■□□ 2.2
UFD1-204ENST00000447868 DNAH12Q6ZR08 3092 aa28.79■■■□□ 2.2
UFD1-204ENST00000447868 EIF5BO60841 1220 aaKnown RBP28.79■■■□□ 2.2
UFD1-204ENST00000447868 TXNP10599 105 aaKnown RBP28.79■■■□□ 2.2
UFD1-204ENST00000447868 NKX3-2P78367 333 aa28.79■■■□□ 2.2
UFD1-204ENST00000447868 TTLL4Q14679 1199 aa28.79■■■□□ 2.2
UFD1-204ENST00000447868 PGM5Q15124 567 aa28.79■■■□□ 2.2
UFD1-204ENST00000447868 OR6J1Q8NGC5 347 aa28.79■■■□□ 2.2
UFD1-204ENST00000447868 IL31RAQ8NI17 732 aa28.79■■■□□ 2.2
UFD1-204ENST00000447868 COPS5Q92905 334 aa28.79■■■□□ 2.2
UFD1-204ENST00000447868 VTI1AQ96AJ9 217 aa28.79■■■□□ 2.2
UFD1-204ENST00000447868 LARP6Q9BRS8 491 aaKnown RBP28.79■■■□□ 2.2
UFD1-204ENST00000447868 PSTPIP2Q9H939 334 aa28.79■■■□□ 2.2
UFD1-204ENST00000447868 KIAA1217Q5T5P2 1943 aa28.79■■■□□ 2.2
UFD1-204ENST00000447868 EIF3JO75822 258 aaKnown RBP28.78■■■□□ 2.2
UFD1-204ENST00000447868 ARIH2O95376 493 aa28.78■■■□□ 2.2
UFD1-204ENST00000447868 SNX17Q15036 470 aa28.78■■■□□ 2.2
UFD1-204ENST00000447868 WWC2Q6AWC2 1192 aa28.78■■■□□ 2.2
UFD1-204ENST00000447868 GLT1D1Q96MS3 346 aa28.78■■■□□ 2.2
UFD1-204ENST00000447868 PCDH10Q9P2E7 1040 aa28.78■■■□□ 2.2
UFD1-204ENST00000447868 NID2Q14112 1375 aa28.77■■■□□ 2.2
UFD1-204ENST00000447868 MEIS2O14770 477 aa28.77■■■□□ 2.2
UFD1-204ENST00000447868 PDIA3P30101 505 aaKnown RBP28.77■■■□□ 2.2
UFD1-204ENST00000447868 CCT2P78371 535 aaKnown RBP28.77■■■□□ 2.2
UFD1-204ENST00000447868 ZFP91Q96JP5 570 aaPredicted RBP28.77■■■□□ 2.2
UFD1-204ENST00000447868 NKRFO15226 690 aaKnown RBP eCLIP28.76■■■□□ 2.19
UFD1-204ENST00000447868 ZEB2O60315 1214 aa28.76■■■□□ 2.19
UFD1-204ENST00000447868 CCND2P30279 289 aa28.76■■■□□ 2.19
UFD1-204ENST00000447868 EVCP57679 992 aa28.76■■■□□ 2.19
UFD1-204ENST00000447868 ANAPC15P60006 121 aa28.76■■■□□ 2.19
UFD1-204ENST00000447868 LY6KQ17RY6 165 aa28.76■■■□□ 2.19
UFD1-204ENST00000447868 CXCL17Q6UXB2 119 aa28.76■■■□□ 2.19
UFD1-204ENST00000447868 CHRDL2Q6WN34 429 aa28.76■■■□□ 2.19
UFD1-204ENST00000447868 PIK3CDO00329 1044 aa28.75■■■□□ 2.19
UFD1-204ENST00000447868 NAPAP54920 295 aa28.75■■■□□ 2.19
UFD1-204ENST00000447868 UBE2SQ16763 222 aa28.75■■■□□ 2.19
UFD1-204ENST00000447868 C1orf53Q5VUE5 145 aa28.75■■■□□ 2.19
UFD1-204ENST00000447868 CCDC62Q6P9F0 684 aa28.75■■■□□ 2.19
UFD1-204ENST00000447868 VSIG10LQ86VR7 867 aa28.75■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms