RNA–Protein interactions for RNA: ENST00000447632.6

TTC39A-212, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39A, Length 2,790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-212ENST00000447632 TRERF1Q96PN7 1200 aa9.8□□□□□ -0.84
TTC39A-212ENST00000447632 USP28Q96RU2 1077 aa9.8□□□□□ -0.84
TTC39A-212ENST00000447632 AMNQ9BXJ7 453 aa9.8□□□□□ -0.84
TTC39A-212ENST00000447632 MOV10L1Q9BXT6 1211 aaKnown RBP9.8□□□□□ -0.84
TTC39A-212ENST00000447632 ARHGAP39Q9C0H5 1083 aa9.8□□□□□ -0.84
TTC39A-212ENST00000447632 SPATC1LQ9H0A9 340 aa9.8□□□□□ -0.84
TTC39A-212ENST00000447632 RANBP17Q9H2T7 1088 aaKnown RBP9.8□□□□□ -0.84
TTC39A-212ENST00000447632 NFIBO00712 420 aa9.79□□□□□ -0.84
TTC39A-212ENST00000447632 CFBP00751 764 aa9.79□□□□□ -0.84
TTC39A-212ENST00000447632 SCG2P13521 617 aa9.79□□□□□ -0.84
TTC39A-212ENST00000447632 RCAN1P53805 252 aa9.79□□□□□ -0.84
TTC39A-212ENST00000447632 NAPAP54920 295 aa9.79□□□□□ -0.84
TTC39A-212ENST00000447632 USP17L6PQ6QN14 398 aa9.79□□□□□ -0.84
TTC39A-212ENST00000447632 ADAMTS5Q9UNA0 930 aa9.79□□□□□ -0.84
TTC39A-212ENST00000447632 ATAD5Q96QE3 1844 aa9.79□□□□□ -0.84
TTC39A-212ENST00000447632 MYH4Q9Y623 1939 aa9.79□□□□□ -0.84
TTC39A-212ENST00000447632 GOLGA6L19H0YKK7 550 aa9.79□□□□□ -0.84
TTC39A-212ENST00000447632 CAVIN2O95810 425 aa9.79□□□□□ -0.84
TTC39A-212ENST00000447632 SYCP1Q15431 976 aa9.79□□□□□ -0.84
TTC39A-212ENST00000447632 PFKFB3Q16875 520 aaPredicted RBP9.79□□□□□ -0.84
TTC39A-212ENST00000447632 FCHSD1Q86WN1 690 aa9.79□□□□□ -0.84
TTC39A-212ENST00000447632 DHX40Q8IX18 779 aaKnown RBP9.79□□□□□ -0.84
TTC39A-212ENST00000447632 CCDC112Q8NEF3 446 aa9.79□□□□□ -0.84
TTC39A-212ENST00000447632 REPS2Q8NFH8 660 aa9.79□□□□□ -0.84
TTC39A-212ENST00000447632 ENGASEQ8NFI3 743 aa9.79□□□□□ -0.84
TTC39A-212ENST00000447632 RASGRP4Q8TDF6 673 aa9.79□□□□□ -0.84
TTC39A-212ENST00000447632 MRFAP1L1Q96HT8 127 aa9.79□□□□□ -0.84
TTC39A-212ENST00000447632 RNF26Q9BY78 433 aaPredicted RBP9.79□□□□□ -0.84
TTC39A-212ENST00000447632 GTPBP4Q9BZE4 634 aaKnown RBP9.79□□□□□ -0.84
TTC39A-212ENST00000447632 RABGAP1Q9Y3P9 1069 aa9.79□□□□□ -0.84
TTC39A-212ENST00000447632 SMCO2A6NFE2 343 aa9.78□□□□□ -0.84
TTC39A-212ENST00000447632 PLA2G6O60733 806 aa9.78□□□□□ -0.84
TTC39A-212ENST00000447632 DEXIO95424 95 aa9.78□□□□□ -0.84
TTC39A-212ENST00000447632 ICAM1P05362 532 aa9.78□□□□□ -0.84
TTC39A-212ENST00000447632 PGK2P07205 417 aa9.78□□□□□ -0.84
TTC39A-212ENST00000447632 NLRP5P59047 1200 aa9.78□□□□□ -0.84
TTC39A-212ENST00000447632 CAP1Q01518 475 aa9.78□□□□□ -0.84
TTC39A-212ENST00000447632 STX1AQ16623 288 aa9.78□□□□□ -0.84
TTC39A-212ENST00000447632 C17orf99Q6UX52 265 aa9.78□□□□□ -0.84
TTC39A-212ENST00000447632 ZNF592Q92610 1267 aa9.78□□□□□ -0.84
TTC39A-212ENST00000447632 TEX13BQ9BXU2 312 aa9.78□□□□□ -0.84
TTC39A-212ENST00000447632 RNF146Q9NTX7 359 aa9.78□□□□□ -0.84
TTC39A-212ENST00000447632 PAXBP1Q9Y5B6 917 aa9.78□□□□□ -0.84
TTC39A-212ENST00000447632 GREB1LQ9C091 1923 aaPredicted RBP9.78□□□□□ -0.84
TTC39A-212ENST00000447632 BRCA2P51587 3418 aa9.78□□□□□ -0.84
TTC39A-212ENST00000447632 CALML3P27482 149 aa9.78□□□□□ -0.84
TTC39A-212ENST00000447632 UBE2SQ16763 222 aa9.78□□□□□ -0.84
TTC39A-212ENST00000447632 CEP135Q66GS9 1140 aa9.78□□□□□ -0.84
TTC39A-212ENST00000447632 MTMR8Q96EF0 704 aa9.78□□□□□ -0.84
TTC39A-212ENST00000447632 LLPHQ9BRT6 129 aaKnown RBP9.78□□□□□ -0.84
TTC39A-212ENST00000447632 BIN2Q9UBW5 565 aaPredicted RBP9.78□□□□□ -0.84
TTC39A-212ENST00000447632 ALDH1A1P00352 501 aa9.77□□□□□ -0.84
TTC39A-212ENST00000447632 SKILP12757 684 aa9.77□□□□□ -0.84
TTC39A-212ENST00000447632 CTGFP29279 349 aa9.77□□□□□ -0.84
TTC39A-212ENST00000447632 GCLCP48506 637 aaPredicted RBP9.77□□□□□ -0.84
TTC39A-212ENST00000447632 UBXN2AP68543 259 aa9.77□□□□□ -0.84
TTC39A-212ENST00000447632 CCZ1BP86790 482 aa9.77□□□□□ -0.84
TTC39A-212ENST00000447632 CCZ1P86791 482 aaPredicted RBP9.77□□□□□ -0.84
TTC39A-212ENST00000447632 MAP2K1Q02750 393 aaPredicted RBP9.77□□□□□ -0.84
TTC39A-212ENST00000447632 FILIP1Q7Z7B0 1213 aa9.77□□□□□ -0.84
TTC39A-212ENST00000447632 ANKRD35Q8N283 1001 aa9.77□□□□□ -0.84
TTC39A-212ENST00000447632 OXER1Q8TDS5 423 aa9.77□□□□□ -0.84
TTC39A-212ENST00000447632 C8orf76Q96K31 380 aa9.77□□□□□ -0.84
TTC39A-212ENST00000447632 PSTPIP2Q9H939 334 aa9.77□□□□□ -0.84
TTC39A-212ENST00000447632 SLC45A1Q9Y2W3 748 aa9.77□□□□□ -0.84
TTC39A-212ENST00000447632 PHIPQ8WWQ0 1821 aa9.77□□□□□ -0.85
TTC39A-212ENST00000447632 STXBP3O00186 592 aa9.77□□□□□ -0.85
TTC39A-212ENST00000447632 CTAGE5O15320 804 aa9.77□□□□□ -0.85
TTC39A-212ENST00000447632 SMARCA1P28370 1054 aa9.77□□□□□ -0.85
TTC39A-212ENST00000447632 BAATQ14032 418 aaPredicted RBP9.77□□□□□ -0.85
TTC39A-212ENST00000447632 NOM1Q5C9Z4 860 aaKnown RBP9.77□□□□□ -0.85
TTC39A-212ENST00000447632 JAKMIP3Q5VZ66 844 aa9.77□□□□□ -0.85
TTC39A-212ENST00000447632 NYAP1Q6ZVC0 841 aa9.77□□□□□ -0.85
TTC39A-212ENST00000447632 UIMC1Q96RL1 719 aa9.77□□□□□ -0.85
TTC39A-212ENST00000447632 TMEM260Q9NX78 707 aa9.77□□□□□ -0.85
TTC39A-212ENST00000447632 BARHL2Q9NY43 387 aa9.77□□□□□ -0.85
TTC39A-212ENST00000447632 BECN2A8MW95 431 aa9.76□□□□□ -0.85
TTC39A-212ENST00000447632 OPLAHO14841 1288 aa9.76□□□□□ -0.85
TTC39A-212ENST00000447632 BCRP11274 1271 aa9.76□□□□□ -0.85
TTC39A-212ENST00000447632 ATP2B1P20020 1258 aa9.76□□□□□ -0.85
TTC39A-212ENST00000447632 PSMC4P43686 418 aa9.76□□□□□ -0.85
TTC39A-212ENST00000447632 CNTN2Q02246 1040 aa9.76□□□□□ -0.85
TTC39A-212ENST00000447632 FAM160A1Q05DH4 1040 aa9.76□□□□□ -0.85
TTC39A-212ENST00000447632 KRT40Q6A162 431 aa9.76□□□□□ -0.85
TTC39A-212ENST00000447632 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.76□□□□□ -0.85
TTC39A-212ENST00000447632 MB21D1Q8N884 522 aa9.76□□□□□ -0.85
TTC39A-212ENST00000447632 CLEC4DQ8WXI8 215 aa9.76□□□□□ -0.85
TTC39A-212ENST00000447632 WBP1LQ9NX94 342 aa9.76□□□□□ -0.85
TTC39A-212ENST00000447632 TRMT1Q9NXH9 659 aaKnown RBP9.76□□□□□ -0.85
TTC39A-212ENST00000447632 OGFRQ9NZT2 677 aa9.76□□□□□ -0.85
TTC39A-212ENST00000447632 BTBD18B2RXH4 712 aa9.76□□□□□ -0.85
TTC39A-212ENST00000447632 GPR25O00155 361 aa9.76□□□□□ -0.85
TTC39A-212ENST00000447632 KINO60870 393 aaKnown RBP9.76□□□□□ -0.85
TTC39A-212ENST00000447632 CDK11BP21127 795 aaKnown RBP9.76□□□□□ -0.85
TTC39A-212ENST00000447632 ME1P48163 572 aa9.76□□□□□ -0.85
TTC39A-212ENST00000447632 SP3Q02447 781 aa9.76□□□□□ -0.85
TTC39A-212ENST00000447632 NR5A1Q13285 461 aa9.76□□□□□ -0.85
TTC39A-212ENST00000447632 FAM110CQ1W6H9 321 aa9.76□□□□□ -0.85
TTC39A-212ENST00000447632 CCDC73Q6ZRK6 1079 aa9.76□□□□□ -0.85
TTC39A-212ENST00000447632 AOPEPQ8N6M6 819 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms