RNA–Protein interactions for RNA: ENST00000446646.1

HDAC9-216, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-216ENST00000446646 ADAMTS5Q9UNA0 930 aa8.58□□□□□ -1.04
HDAC9-216ENST00000446646 DIS3Q9Y2L1 958 aaKnown RBP8.58□□□□□ -1.04
HDAC9-216ENST00000446646 ZFYVE26Q68DK2 2539 aa8.57□□□□□ -1.04
HDAC9-216ENST00000446646 MCM3APO60318 1980 aa8.57□□□□□ -1.04
HDAC9-216ENST00000446646 PTPRSQ13332 1948 aa8.57□□□□□ -1.04
HDAC9-216ENST00000446646 DNAJC25-GNG10A0A024R161 153 aa8.57□□□□□ -1.04
HDAC9-216ENST00000446646 NRG2O14511 850 aaPredicted RBP8.57□□□□□ -1.04
HDAC9-216ENST00000446646 BAG3O95817 575 aa8.57□□□□□ -1.04
HDAC9-216ENST00000446646 ARID4AP29374 1257 aaPredicted RBP8.57□□□□□ -1.04
HDAC9-216ENST00000446646 USP46P62068 366 aa8.57□□□□□ -1.04
HDAC9-216ENST00000446646 DEFB103AP81534 67 aa8.57□□□□□ -1.04
HDAC9-216ENST00000446646 MVPQ14764 893 aaKnown RBP8.57□□□□□ -1.04
HDAC9-216ENST00000446646 GPNMBQ14956 572 aa8.57□□□□□ -1.04
HDAC9-216ENST00000446646 CLUL1Q15846 466 aa8.57□□□□□ -1.04
HDAC9-216ENST00000446646 PLA2G2CQ5R387 149 aa8.57□□□□□ -1.04
HDAC9-216ENST00000446646 BRICD5Q6PL45 260 aa8.57□□□□□ -1.04
HDAC9-216ENST00000446646 MAMDC4Q6UXC1 1216 aa8.57□□□□□ -1.04
HDAC9-216ENST00000446646 LIAT1Q6ZQX7 453 aa8.57□□□□□ -1.04
HDAC9-216ENST00000446646 FAM160A2Q8N612 972 aaPredicted RBP8.57□□□□□ -1.04
HDAC9-216ENST00000446646 ALDH8A1Q9H2A2 487 aaPredicted RBP8.57□□□□□ -1.04
HDAC9-216ENST00000446646 COPRSQ9NQ92 184 aa8.57□□□□□ -1.04
HDAC9-216ENST00000446646 PRDM9Q9NQV7 894 aa8.57□□□□□ -1.04
HDAC9-216ENST00000446646 FCF1Q9Y324 198 aaKnown RBP8.57□□□□□ -1.04
HDAC9-216ENST00000446646 PLXNA3P51805 1871 aa8.57□□□□□ -1.04
HDAC9-216ENST00000446646 TMEM221A6NGB7 291 aa8.56□□□□□ -1.04
HDAC9-216ENST00000446646 M0R296 226 aa8.56□□□□□ -1.04
HDAC9-216ENST00000446646 VWA5AO00534 786 aa8.56□□□□□ -1.04
HDAC9-216ENST00000446646 MPHOSPH10O00566 681 aaKnown RBP8.56□□□□□ -1.04
HDAC9-216ENST00000446646 SLC25A27O95847 323 aa8.56□□□□□ -1.04
HDAC9-216ENST00000446646 CYP2E1P05181 493 aaPredicted RBP8.56□□□□□ -1.04
HDAC9-216ENST00000446646 CYP2D6P10635 497 aa8.56□□□□□ -1.04
HDAC9-216ENST00000446646 STAT3P40763 770 aa8.56□□□□□ -1.04
HDAC9-216ENST00000446646 NKX3-2P78367 333 aa8.56□□□□□ -1.04
HDAC9-216ENST00000446646 HNRNPUQ00839 825 aaKnown RBP eCLIP8.56□□□□□ -1.04
HDAC9-216ENST00000446646 GABPAQ06546 454 aa8.56□□□□□ -1.04
HDAC9-216ENST00000446646 RNF135Q8IUD6 432 aa8.56□□□□□ -1.04
HDAC9-216ENST00000446646 SLC9A7Q96T83 725 aa8.56□□□□□ -1.04
HDAC9-216ENST00000446646 NOL10Q9BSC4 688 aaKnown RBP8.56□□□□□ -1.04
HDAC9-216ENST00000446646 EHD4Q9H223 541 aa8.56□□□□□ -1.04
HDAC9-216ENST00000446646 COL11A1P12107 1806 aaPredicted RBP8.56□□□□□ -1.04
HDAC9-216ENST00000446646 FOCADQ5VW36 1801 aa8.56□□□□□ -1.04
HDAC9-216ENST00000446646 GPR179Q6PRD1 2367 aa8.56□□□□□ -1.04
HDAC9-216ENST00000446646 LINC01553A4QN01 128 aa8.55□□□□□ -1.04
HDAC9-216ENST00000446646 H0Y858 1186 aa8.55□□□□□ -1.04
HDAC9-216ENST00000446646 HOXA2O43364 376 aa8.55□□□□□ -1.04
HDAC9-216ENST00000446646 AKR1B1P15121 316 aa8.55□□□□□ -1.04
HDAC9-216ENST00000446646 LTBRP36941 435 aa8.55□□□□□ -1.04
HDAC9-216ENST00000446646 DLX2Q07687 328 aaPredicted RBP8.55□□□□□ -1.04
HDAC9-216ENST00000446646 FSCN1Q16658 493 aaKnown RBP8.55□□□□□ -1.04
HDAC9-216ENST00000446646 HERC4Q5GLZ8 1057 aaPredicted RBP8.55□□□□□ -1.04
HDAC9-216ENST00000446646 ARMCX2Q7L311 632 aa8.55□□□□□ -1.04
HDAC9-216ENST00000446646 ZNF598Q86UK7 904 aaKnown RBP8.55□□□□□ -1.04
HDAC9-216ENST00000446646 ADHFE1Q8IWW8 467 aa8.55□□□□□ -1.04
HDAC9-216ENST00000446646 PHOSPHO2Q8TCD6 241 aa8.55□□□□□ -1.04
HDAC9-216ENST00000446646 ATOH1Q92858 354 aaPredicted RBP8.55□□□□□ -1.04
HDAC9-216ENST00000446646 PBXIP1Q96AQ6 731 aa8.55□□□□□ -1.04
HDAC9-216ENST00000446646 NUP88Q99567 741 aaPredicted RBP8.55□□□□□ -1.04
HDAC9-216ENST00000446646 C17orf80Q9BSJ5 609 aa8.55□□□□□ -1.04
HDAC9-216ENST00000446646 CABP5Q9NP86 173 aa8.55□□□□□ -1.04
HDAC9-216ENST00000446646 TLR9Q9NR96 1032 aa8.55□□□□□ -1.04
HDAC9-216ENST00000446646 PDGFCQ9NRA1 345 aa8.55□□□□□ -1.04
HDAC9-216ENST00000446646 POLR3EQ9NVU0 708 aa8.55□□□□□ -1.04
HDAC9-216ENST00000446646 LMCD1Q9NZU5 365 aa8.55□□□□□ -1.04
HDAC9-216ENST00000446646 GNEQ9Y223 722 aaKnown RBP8.55□□□□□ -1.04
HDAC9-216ENST00000446646 SETXQ7Z333 2677 aaKnown RBP8.55□□□□□ -1.04
HDAC9-216ENST00000446646 PARP14Q460N5 1801 aa8.54□□□□□ -1.04
HDAC9-216ENST00000446646 MYO5AQ9Y4I1 1855 aaKnown RBP8.54□□□□□ -1.04
HDAC9-216ENST00000446646 DYNC1LI2O43237 492 aaPredicted RBP8.54□□□□□ -1.04
HDAC9-216ENST00000446646 CT47B1P0C2W7 299 aaPredicted RBP8.54□□□□□ -1.04
HDAC9-216ENST00000446646 SMPD1P17405 629 aa8.54□□□□□ -1.04
HDAC9-216ENST00000446646 CDK11BP21127 795 aaKnown RBP8.54□□□□□ -1.04
HDAC9-216ENST00000446646 CYP7A1P22680 504 aa8.54□□□□□ -1.04
HDAC9-216ENST00000446646 USP5P45974 858 aa8.54□□□□□ -1.04
HDAC9-216ENST00000446646 ERVK-21P61565 698 aa8.54□□□□□ -1.04
HDAC9-216ENST00000446646 WDR5P61964 334 aaKnown RBP8.54□□□□□ -1.04
HDAC9-216ENST00000446646 CNTN2Q02246 1040 aa8.54□□□□□ -1.04
HDAC9-216ENST00000446646 TCEAL5Q5H9L2 206 aa8.54□□□□□ -1.04
HDAC9-216ENST00000446646 MYSM1Q5VVJ2 828 aa8.54□□□□□ -1.04
HDAC9-216ENST00000446646 FAM117BQ6P1L5 589 aa8.54□□□□□ -1.04
HDAC9-216ENST00000446646 ATF7IPQ6VMQ6 1270 aa8.54□□□□□ -1.04
HDAC9-216ENST00000446646 TRIM67Q6ZTA4 783 aa8.54□□□□□ -1.04
HDAC9-216ENST00000446646 EP400NLQ6ZTU2 488 aa8.54□□□□□ -1.04
HDAC9-216ENST00000446646 ERMP1Q7Z2K6 904 aa8.54□□□□□ -1.04
HDAC9-216ENST00000446646 TLK2Q86UE8 772 aa8.54□□□□□ -1.04
HDAC9-216ENST00000446646 CCDC144CPQ8IYA2 1237 aa8.54□□□□□ -1.04
HDAC9-216ENST00000446646 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.54□□□□□ -1.04
HDAC9-216ENST00000446646 EDAQ92838 391 aa8.54□□□□□ -1.04
HDAC9-216ENST00000446646 DYNLL2Q96FJ2 89 aa8.54□□□□□ -1.04
HDAC9-216ENST00000446646 FTOQ9C0B1 505 aaKnown RBP eCLIP8.54□□□□□ -1.04
HDAC9-216ENST00000446646 VCPKMTQ9H867 229 aa8.54□□□□□ -1.04
HDAC9-216ENST00000446646 SPC25Q9HBM1 224 aa8.54□□□□□ -1.04
HDAC9-216ENST00000446646 PPP1R9AQ9ULJ8 1098 aa8.54□□□□□ -1.04
HDAC9-216ENST00000446646 TNKSO95271 1327 aa8.54□□□□□ -1.04
HDAC9-216ENST00000446646 KMT2EQ8IZD2 1858 aa8.53□□□□□ -1.04
HDAC9-216ENST00000446646 PRR23AA6NEV1 266 aa8.53□□□□□ -1.04
HDAC9-216ENST00000446646 KIF28PB7ZC32 967 aa8.53□□□□□ -1.04
HDAC9-216ENST00000446646 PFKMP08237 780 aa8.53□□□□□ -1.04
HDAC9-216ENST00000446646 IQCF3P0C7M6 154 aa8.53□□□□□ -1.04
HDAC9-216ENST00000446646 UBTFL1P0CB47 393 aaPredicted RBP8.53□□□□□ -1.04
HDAC9-216ENST00000446646 ZAP70P43403 619 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms