RNA–Protein interactions for RNA: ENST00000446613.6

HDAC11-214, Transcript of histone deacetylase 11, humanhuman

TSL 5 BASIC

Gene HDAC11, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-214ENST00000446613 ZSCAN29Q8IWY8 852 aaPredicted RBP18.19■□□□□ 0.5
HDAC11-214ENST00000446613 TSGA10Q9BZW7 698 aa18.19■□□□□ 0.5
HDAC11-214ENST00000446613 NDST4Q9H3R1 872 aa18.19■□□□□ 0.5
HDAC11-214ENST00000446613 IL17RBQ9NRM6 502 aa18.19■□□□□ 0.5
HDAC11-214ENST00000446613 USP17L3A6NCW0 530 aa18.18■□□□□ 0.5
HDAC11-214ENST00000446613 USP17L4A6NCW7 530 aa18.18■□□□□ 0.5
HDAC11-214ENST00000446613 CCDC152Q4G0S7 254 aa18.18■□□□□ 0.5
HDAC11-214ENST00000446613 USP17L1Q7RTZ2 530 aa18.18■□□□□ 0.5
HDAC11-214ENST00000446613 HEXIM1O94992 359 aaKnown RBP18.18■□□□□ 0.5
HDAC11-214ENST00000446613 CALML3P27482 149 aa18.18■□□□□ 0.5
HDAC11-214ENST00000446613 PRDX5P30044 214 aa18.18■□□□□ 0.5
HDAC11-214ENST00000446613 LRRC41Q15345 812 aa18.18■□□□□ 0.5
HDAC11-214ENST00000446613 DNAAF5Q86Y56 855 aa18.18■□□□□ 0.5
HDAC11-214ENST00000446613 YY1AP1Q9H869 796 aa18.18■□□□□ 0.5
HDAC11-214ENST00000446613 ANKRD36CQ5JPF3 1778 aa18.18■□□□□ 0.5
HDAC11-214ENST00000446613 CCNT1O60563 726 aaKnown RBP18.17■□□□□ 0.5
HDAC11-214ENST00000446613 IBSPP21815 317 aaPredicted RBP18.17■□□□□ 0.5
HDAC11-214ENST00000446613 TFAP4Q01664 338 aa18.17■□□□□ 0.5
HDAC11-214ENST00000446613 MECOMQ03112 1051 aa18.17■□□□□ 0.5
HDAC11-214ENST00000446613 VWA3BQ502W6 1294 aa18.17■□□□□ 0.5
HDAC11-214ENST00000446613 EMBQ6PCB8 327 aa18.17■□□□□ 0.5
HDAC11-214ENST00000446613 GBP6Q6ZN66 633 aa18.17■□□□□ 0.5
HDAC11-214ENST00000446613 PNMA1Q8ND90 353 aa18.17■□□□□ 0.5
HDAC11-214ENST00000446613 PIK3R5Q8WYR1 880 aa18.17■□□□□ 0.5
HDAC11-214ENST00000446613 NCAPGQ9BPX3 1015 aa18.17■□□□□ 0.5
HDAC11-214ENST00000446613 CCSER1Q9C0I3 900 aa18.17■□□□□ 0.5
HDAC11-214ENST00000446613 CENPHQ9H3R5 247 aa18.17■□□□□ 0.5
HDAC11-214ENST00000446613 TCP1P17987 556 aaKnown RBP18.17■□□□□ 0.5
HDAC11-214ENST00000446613 LSP1P33241 339 aa18.17■□□□□ 0.5
HDAC11-214ENST00000446613 PAFAH1B1P43034 410 aa18.17■□□□□ 0.5
HDAC11-214ENST00000446613 TDRD12Q587J7 1177 aaKnown RBP18.17■□□□□ 0.5
HDAC11-214ENST00000446613 ALS2CR12Q96Q35 445 aa18.17■□□□□ 0.5
HDAC11-214ENST00000446613 NHSL1Q5SYE7 1610 aa18.17■□□□□ 0.5
HDAC11-214ENST00000446613 ARID5AQ03989 594 aa18.16■□□□□ 0.5
HDAC11-214ENST00000446613 BRINP3Q76B58 766 aa18.16■□□□□ 0.5
HDAC11-214ENST00000446613 ZNF572Q7Z3I7 529 aaPredicted RBP18.16■□□□□ 0.5
HDAC11-214ENST00000446613 KRT12Q99456 494 aa18.16■□□□□ 0.5
HDAC11-214ENST00000446613 GOLPH3Q9H4A6 298 aa18.16■□□□□ 0.5
HDAC11-214ENST00000446613 NIP7Q9Y221 180 aaKnown RBP eCLIP18.16■□□□□ 0.5
HDAC11-214ENST00000446613 BICDL2A1A5D9 508 aa18.16■□□□□ 0.5
HDAC11-214ENST00000446613 ERVV-1B6SEH8 477 aa18.16■□□□□ 0.5
HDAC11-214ENST00000446613 H0YHG0 523 aa18.16■□□□□ 0.5
HDAC11-214ENST00000446613 BACH1O14867 736 aa18.16■□□□□ 0.5
HDAC11-214ENST00000446613 HPDP32754 393 aaPredicted RBP18.16■□□□□ 0.5
HDAC11-214ENST00000446613 SKOR1P84550 965 aa18.16■□□□□ 0.5
HDAC11-214ENST00000446613 CFAP58Q5T655 872 aa18.16■□□□□ 0.5
HDAC11-214ENST00000446613 NOC3LQ8WTT2 800 aaKnown RBP18.16■□□□□ 0.5
HDAC11-214ENST00000446613 GEMIN8Q9NWZ8 242 aaKnown RBP18.16■□□□□ 0.5
HDAC11-214ENST00000446613 TFCP2L1Q9NZI6 479 aa18.16■□□□□ 0.5
HDAC11-214ENST00000446613 ZNF804BA4D1E1 1349 aa18.16■□□□□ 0.5
HDAC11-214ENST00000446613 A0A1W2PQJ5 194 aa18.16■□□□□ 0.5
HDAC11-214ENST00000446613 EPB41P11171 864 aaKnown RBP18.16■□□□□ 0.5
HDAC11-214ENST00000446613 CDK17Q00537 523 aa18.16■□□□□ 0.5
HDAC11-214ENST00000446613 NAA35Q5VZE5 725 aa18.16■□□□□ 0.5
HDAC11-214ENST00000446613 CADPS2Q86UW7 1296 aa18.16■□□□□ 0.5
HDAC11-214ENST00000446613 IQCKQ8N0W5 287 aa18.16■□□□□ 0.5
HDAC11-214ENST00000446613 OTUD6BQ8N6M0 293 aa18.16■□□□□ 0.5
HDAC11-214ENST00000446613 SLC44A5Q8NCS7 719 aa18.16■□□□□ 0.5
HDAC11-214ENST00000446613 OR2W6PQ8NHA6 318 aa18.16■□□□□ 0.5
HDAC11-214ENST00000446613 BAP1Q92560 729 aa18.16■□□□□ 0.5
HDAC11-214ENST00000446613 NSUN4Q96CB9 384 aaKnown RBP18.16■□□□□ 0.5
HDAC11-214ENST00000446613 FAM84BQ96KN1 310 aaPredicted RBP18.16■□□□□ 0.5
HDAC11-214ENST00000446613 MMTAG2Q9BU76 263 aaKnown RBP18.16■□□□□ 0.5
HDAC11-214ENST00000446613 MCM9Q9NXL9 1143 aa18.16■□□□□ 0.5
HDAC11-214ENST00000446613 TRHP20396 242 aaPredicted RBP18.15■□□□□ 0.5
HDAC11-214ENST00000446613 IL6STP40189 918 aaPredicted RBP18.15■□□□□ 0.5
HDAC11-214ENST00000446613 FNTAP49354 379 aa18.15■□□□□ 0.5
HDAC11-214ENST00000446613 HDLBPQ00341 1268 aaKnown RBP18.15■□□□□ 0.5
HDAC11-214ENST00000446613 ALS2CLQ60I27 953 aa18.15■□□□□ 0.5
HDAC11-214ENST00000446613 CAVIN3Q969G5 261 aa18.15■□□□□ 0.5
HDAC11-214ENST00000446613 TANGO6Q9C0B7 1094 aa18.15■□□□□ 0.5
HDAC11-214ENST00000446613 TCP11L1Q9NUJ3 509 aa18.15■□□□□ 0.5
HDAC11-214ENST00000446613 PALMO75781 387 aa18.15■□□□□ 0.5
HDAC11-214ENST00000446613 CASKIN2Q8WXE0 1202 aa18.15■□□□□ 0.5
HDAC11-214ENST00000446613 UIMC1Q96RL1 719 aa18.15■□□□□ 0.5
HDAC11-214ENST00000446613 MAD2L2Q9UI95 211 aa18.15■□□□□ 0.5
HDAC11-214ENST00000446613 ORC4O43929 436 aa18.14■□□□□ 0.49
HDAC11-214ENST00000446613 PRLRP16471 622 aa18.14■□□□□ 0.49
HDAC11-214ENST00000446613 HNRNPH3P31942 346 aaKnown RBP18.14■□□□□ 0.49
HDAC11-214ENST00000446613 KIF5BP33176 963 aa18.14■□□□□ 0.49
HDAC11-214ENST00000446613 FIGNQ5HY92 759 aa18.14■□□□□ 0.49
HDAC11-214ENST00000446613 RNF187Q5TA31 235 aaPredicted RBP18.14■□□□□ 0.49
HDAC11-214ENST00000446613 FAM114A1Q8IWE2 563 aa18.14■□□□□ 0.49
HDAC11-214ENST00000446613 PACSIN1Q9BY11 444 aa18.14■□□□□ 0.49
HDAC11-214ENST00000446613 CD248Q9HCU0 757 aa18.14■□□□□ 0.49
HDAC11-214ENST00000446613 ITIH3Q06033 890 aa18.14■□□□□ 0.49
HDAC11-214ENST00000446613 HGSNATQ68CP4 663 aa18.14■□□□□ 0.49
HDAC11-214ENST00000446613 CACNA2D4Q7Z3S7 1137 aa18.14■□□□□ 0.49
HDAC11-214ENST00000446613 KLHL7Q8IXQ5 586 aa18.14■□□□□ 0.49
HDAC11-214ENST00000446613 MYCBPQ99417 103 aaPredicted RBP18.14■□□□□ 0.49
HDAC11-214ENST00000446613 JPH2Q9BR39 696 aaPredicted RBP18.14■□□□□ 0.49
HDAC11-214ENST00000446613 FAM170AA1A519 330 aa18.13■□□□□ 0.49
HDAC11-214ENST00000446613 MYMKA6NI61 221 aa18.13■□□□□ 0.49
HDAC11-214ENST00000446613 STXBP3O00186 592 aa18.13■□□□□ 0.49
HDAC11-214ENST00000446613 MEFVO15553 781 aaPredicted RBP18.13■□□□□ 0.49
HDAC11-214ENST00000446613 NR1D1P20393 614 aa18.13■□□□□ 0.49
HDAC11-214ENST00000446613 TXKP42681 527 aa18.13■□□□□ 0.49
HDAC11-214ENST00000446613 EHHADHQ08426 723 aa18.13■□□□□ 0.49
HDAC11-214ENST00000446613 STX8Q9UNK0 236 aa18.13■□□□□ 0.49
HDAC11-214ENST00000446613 TLR2O60603 784 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms