RNA–Protein interactions for RNA: ENST00000446008.5

UBE2D4-206, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2 BASIC

Gene UBE2D4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-206ENST00000446008 TET1Q8NFU7 2136 aa11.78□□□□□ -0.52
UBE2D4-206ENST00000446008 EPOPA6NHQ4 379 aa11.78□□□□□ -0.52
UBE2D4-206ENST00000446008 CHGBP05060 677 aa11.78□□□□□ -0.52
UBE2D4-206ENST00000446008 ACTN1P12814 892 aa11.78□□□□□ -0.52
UBE2D4-206ENST00000446008 PRSS12P56730 875 aa11.78□□□□□ -0.52
UBE2D4-206ENST00000446008 TKFCQ3LXA3 575 aa11.78□□□□□ -0.52
UBE2D4-206ENST00000446008 ZSCAN25Q6NSZ9 544 aa11.78□□□□□ -0.52
UBE2D4-206ENST00000446008 GMCL1P1Q8NEA9 526 aa11.78□□□□□ -0.52
UBE2D4-206ENST00000446008 SLC9A7Q96T83 725 aa11.78□□□□□ -0.52
UBE2D4-206ENST00000446008 PDGFCQ9NRA1 345 aa11.78□□□□□ -0.52
UBE2D4-206ENST00000446008 COG6Q9Y2V7 657 aa11.78□□□□□ -0.52
UBE2D4-206ENST00000446008 SCN10AQ9Y5Y9 1956 aa11.78□□□□□ -0.52
UBE2D4-206ENST00000446008 GSG1L2A8MUP6 293 aa11.77□□□□□ -0.53
UBE2D4-206ENST00000446008 PI4K2BG5E9Z4 385 aa11.77□□□□□ -0.53
UBE2D4-206ENST00000446008 RAB11FIP3O75154 756 aa11.77□□□□□ -0.53
UBE2D4-206ENST00000446008 BMP3P12645 472 aa11.77□□□□□ -0.53
UBE2D4-206ENST00000446008 RFC2P35250 354 aa11.77□□□□□ -0.53
UBE2D4-206ENST00000446008 PSMC6P62333 389 aa11.77□□□□□ -0.53
UBE2D4-206ENST00000446008 TAP1Q03518 808 aa11.77□□□□□ -0.53
UBE2D4-206ENST00000446008 MORC4Q8TE76 937 aa11.77□□□□□ -0.53
UBE2D4-206ENST00000446008 STRBPQ96SI9 672 aaKnown RBP11.77□□□□□ -0.53
UBE2D4-206ENST00000446008 CERS4Q9HA82 394 aa11.77□□□□□ -0.53
UBE2D4-206ENST00000446008 NPDC1Q9NQX5 325 aaPredicted RBP11.77□□□□□ -0.53
UBE2D4-206ENST00000446008 HOMER2Q9NSB8 354 aa11.77□□□□□ -0.53
UBE2D4-206ENST00000446008 MTMR4Q9NYA4 1195 aa11.77□□□□□ -0.53
UBE2D4-206ENST00000446008 TRIP12Q14669 1992 aaPredicted RBP11.77□□□□□ -0.53
UBE2D4-206ENST00000446008 ZNF536O15090 1300 aa11.77□□□□□ -0.53
UBE2D4-206ENST00000446008 LCTP09848 1927 aa11.76□□□□□ -0.53
UBE2D4-206ENST00000446008 KIF28PB7ZC32 967 aa11.76□□□□□ -0.53
UBE2D4-206ENST00000446008 TULP1O00294 542 aaPredicted RBP11.76□□□□□ -0.53
UBE2D4-206ENST00000446008 PLA2G6O60733 806 aa11.76□□□□□ -0.53
UBE2D4-206ENST00000446008 TTLL1O95922 423 aa11.76□□□□□ -0.53
UBE2D4-206ENST00000446008 CYP2C9P11712 490 aa11.76□□□□□ -0.53
UBE2D4-206ENST00000446008 PTGS1P23219 599 aa11.76□□□□□ -0.53
UBE2D4-206ENST00000446008 GRB10Q13322 594 aa11.76□□□□□ -0.53
UBE2D4-206ENST00000446008 TMEM63BQ5T3F8 832 aa11.76□□□□□ -0.53
UBE2D4-206ENST00000446008 KRT40Q6A162 431 aa11.76□□□□□ -0.53
UBE2D4-206ENST00000446008 DEFB128Q7Z7B8 93 aa11.76□□□□□ -0.53
UBE2D4-206ENST00000446008 FAM160B2Q86V87 743 aa11.76□□□□□ -0.53
UBE2D4-206ENST00000446008 ZNF444Q8N0Y2 327 aaPredicted RBP11.76□□□□□ -0.53
UBE2D4-206ENST00000446008 CHURC1Q8WUH1 139 aa11.76□□□□□ -0.53
UBE2D4-206ENST00000446008 ARNTL2Q8WYA1 636 aa11.76□□□□□ -0.53
UBE2D4-206ENST00000446008 CEP95Q96GE4 821 aa11.76□□□□□ -0.53
UBE2D4-206ENST00000446008 TRERF1Q96PN7 1200 aa11.76□□□□□ -0.53
UBE2D4-206ENST00000446008 VTA1Q9NP79 307 aa11.76□□□□□ -0.53
UBE2D4-206ENST00000446008 RNF146Q9NTX7 359 aa11.76□□□□□ -0.53
UBE2D4-206ENST00000446008 TRMT13Q9NUP7 481 aaKnown RBP11.76□□□□□ -0.53
UBE2D4-206ENST00000446008 POLR3EQ9NVU0 708 aa11.76□□□□□ -0.53
UBE2D4-206ENST00000446008 LMCD1Q9NZU5 365 aa11.76□□□□□ -0.53
UBE2D4-206ENST00000446008 TNKSO95271 1327 aa11.76□□□□□ -0.53
UBE2D4-206ENST00000446008 GOLGA8CPA6NN73 597 aa11.75□□□□□ -0.53
UBE2D4-206ENST00000446008 TMEM232C9JQI7 657 aa11.75□□□□□ -0.53
UBE2D4-206ENST00000446008 LPXNO60711 386 aa11.75□□□□□ -0.53
UBE2D4-206ENST00000446008 ARHGEF15O94989 841 aa11.75□□□□□ -0.53
UBE2D4-206ENST00000446008 STAT2P52630 851 aa11.75□□□□□ -0.53
UBE2D4-206ENST00000446008 PURAQ00577 322 aaKnown RBP11.75□□□□□ -0.53
UBE2D4-206ENST00000446008 DUSP28Q4G0W2 176 aa11.75□□□□□ -0.53
UBE2D4-206ENST00000446008 SLFN13Q68D06 897 aa11.75□□□□□ -0.53
UBE2D4-206ENST00000446008 KIAA1211Q6ZU35 1233 aa11.75□□□□□ -0.53
UBE2D4-206ENST00000446008 PACS2Q86VP3 889 aa11.75□□□□□ -0.53
UBE2D4-206ENST00000446008 HERC6Q8IVU3 1022 aa11.75□□□□□ -0.53
UBE2D4-206ENST00000446008 FBXO16Q8IX29 292 aaPredicted RBP11.75□□□□□ -0.53
UBE2D4-206ENST00000446008 STAG1Q8WVM7 1258 aa11.75□□□□□ -0.53
UBE2D4-206ENST00000446008 ZNF287Q9HBT7 754 aa11.75□□□□□ -0.53
UBE2D4-206ENST00000446008 CYP39A1Q9NYL5 469 aa11.75□□□□□ -0.53
UBE2D4-206ENST00000446008 PTPRSQ13332 1948 aa11.75□□□□□ -0.53
UBE2D4-206ENST00000446008 TANC1Q9C0D5 1861 aa11.74□□□□□ -0.53
UBE2D4-206ENST00000446008 LOC102724159A0A0B4J2E5 919 aa11.74□□□□□ -0.53
UBE2D4-206ENST00000446008 RBM47A0AV96 593 aaKnown RBP11.74□□□□□ -0.53
UBE2D4-206ENST00000446008 MINDY4BA8MYZ0 360 aa11.74□□□□□ -0.53
UBE2D4-206ENST00000446008 CCER2I3L3R5 266 aa11.74□□□□□ -0.53
UBE2D4-206ENST00000446008 IQCF3P0C7M6 154 aa11.74□□□□□ -0.53
UBE2D4-206ENST00000446008 PWP2Q15269 919 aaKnown RBP11.74□□□□□ -0.53
UBE2D4-206ENST00000446008 EEPD1Q7L9B9 569 aa11.74□□□□□ -0.53
UBE2D4-206ENST00000446008 SIRT2Q8IXJ6 389 aa11.74□□□□□ -0.53
UBE2D4-206ENST00000446008 STK11IPQ8N1F8 1099 aa11.74□□□□□ -0.53
UBE2D4-206ENST00000446008 NEDD1Q8NHV4 660 aa11.74□□□□□ -0.53
UBE2D4-206ENST00000446008 GMCL1Q96IK5 515 aa11.74□□□□□ -0.53
UBE2D4-206ENST00000446008 CD320Q9NPF0 282 aa11.74□□□□□ -0.53
UBE2D4-206ENST00000446008 PLIN4Q96Q06 1357 aa11.74□□□□□ -0.53
UBE2D4-206ENST00000446008 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.73□□□□□ -0.53
UBE2D4-206ENST00000446008 PRR33A8MZF0 331 aa11.73□□□□□ -0.53
UBE2D4-206ENST00000446008 HMMRO75330 724 aa11.73□□□□□ -0.53
UBE2D4-206ENST00000446008 BAIAP3O94812 1187 aa11.73□□□□□ -0.53
UBE2D4-206ENST00000446008 ALAS1P13196 640 aa11.73□□□□□ -0.53
UBE2D4-206ENST00000446008 CPT1AP50416 773 aa11.73□□□□□ -0.53
UBE2D4-206ENST00000446008 PTPN11Q06124 597 aaPredicted RBP11.73□□□□□ -0.53
UBE2D4-206ENST00000446008 PTGDRQ13258 359 aa11.73□□□□□ -0.53
UBE2D4-206ENST00000446008 MUM1L1Q5H9M0 696 aa11.73□□□□□ -0.53
UBE2D4-206ENST00000446008 NFRKBQ6P4R8 1299 aa11.73□□□□□ -0.53
UBE2D4-206ENST00000446008 ALYREFQ86V81 257 aaKnown RBP11.73□□□□□ -0.53
UBE2D4-206ENST00000446008 LRRC47Q8N1G4 583 aaKnown RBP11.73□□□□□ -0.53
UBE2D4-206ENST00000446008 RETREG2Q8NC44 543 aa11.73□□□□□ -0.53
UBE2D4-206ENST00000446008 OSBP2Q969R2 916 aa11.73□□□□□ -0.53
UBE2D4-206ENST00000446008 MTG1Q9BT17 334 aaPredicted RBP11.73□□□□□ -0.53
UBE2D4-206ENST00000446008 EPB41L4AQ9HCS5 686 aaPredicted RBP11.73□□□□□ -0.53
UBE2D4-206ENST00000446008 DDX49Q9Y6V7 483 aaKnown RBP11.73□□□□□ -0.53
UBE2D4-206ENST00000446008 COL4A4P53420 1690 aaPredicted RBP11.72□□□□□ -0.53
UBE2D4-206ENST00000446008 FAM86C2PA6NEL3 165 aa11.72□□□□□ -0.53
UBE2D4-206ENST00000446008 PRDM1O75626 825 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms