RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 BRDTQ58F21 947 aaPredicted RBP18.06■□□□□ 0.48
SEC13-213ENST00000445064 FAM47CQ5HY64 1035 aa18.06■□□□□ 0.48
SEC13-213ENST00000445064 ENAHQ8N8S7 591 aaPredicted RBP18.06■□□□□ 0.48
SEC13-213ENST00000445064 USP38Q8NB14 1042 aa18.06■□□□□ 0.48
SEC13-213ENST00000445064 PPM1EQ8WY54 764 aa18.06■□□□□ 0.48
SEC13-213ENST00000445064 VWCEQ96DN2 955 aa18.06■□□□□ 0.48
SEC13-213ENST00000445064 MTIF3Q9H2K0 278 aaKnown RBP18.06■□□□□ 0.48
SEC13-213ENST00000445064 NKX2-4Q9H2Z4 354 aa18.06■□□□□ 0.48
SEC13-213ENST00000445064 UNC80Q8N2C7 3258 aa18.06■□□□□ 0.48
SEC13-213ENST00000445064 A6NJR5 290 aa18.05■□□□□ 0.48
SEC13-213ENST00000445064 DHX16O60231 1041 aaKnown RBP18.05■□□□□ 0.48
SEC13-213ENST00000445064 NT5C2P49902 561 aa18.05■□□□□ 0.48
SEC13-213ENST00000445064 RAB30Q15771 203 aa18.05■□□□□ 0.48
SEC13-213ENST00000445064 SYTL5Q8TDW5 730 aaPredicted RBP18.05■□□□□ 0.48
SEC13-213ENST00000445064 GAS2L1Q99501 681 aaPredicted RBP18.05■□□□□ 0.48
SEC13-213ENST00000445064 COL20A1Q9P218 1284 aa18.05■□□□□ 0.48
SEC13-213ENST00000445064 CTNNA3Q9UI47 895 aa18.05■□□□□ 0.48
SEC13-213ENST00000445064 YBX2Q9Y2T7 364 aaKnown RBP18.05■□□□□ 0.48
SEC13-213ENST00000445064 ABCB11O95342 1321 aa18.04■□□□□ 0.48
SEC13-213ENST00000445064 RAD50Q92878 1312 aa18.04■□□□□ 0.48
SEC13-213ENST00000445064 ZBBXA8MT70 800 aa18.04■□□□□ 0.48
SEC13-213ENST00000445064 KPNA6O60684 536 aa18.04■□□□□ 0.48
SEC13-213ENST00000445064 RABGGTBP53611 331 aa18.04■□□□□ 0.48
SEC13-213ENST00000445064 CHMP4BP1P59074 171 aa18.04■□□□□ 0.48
SEC13-213ENST00000445064 TTLL4Q14679 1199 aa18.04■□□□□ 0.48
SEC13-213ENST00000445064 QRICH1Q2TAL8 776 aa18.04■□□□□ 0.48
SEC13-213ENST00000445064 ASPRV1Q53RT3 343 aa18.04■□□□□ 0.48
SEC13-213ENST00000445064 SEPT14Q6ZU15 432 aa18.04■□□□□ 0.48
SEC13-213ENST00000445064 DEFB128Q7Z7B8 93 aa18.04■□□□□ 0.48
SEC13-213ENST00000445064 KRT23Q9C075 422 aa18.04■□□□□ 0.48
SEC13-213ENST00000445064 IL25Q9H293 177 aa18.04■□□□□ 0.48
SEC13-213ENST00000445064 JMJD4Q9H9V9 463 aa18.04■□□□□ 0.48
SEC13-213ENST00000445064 SLC28A3Q9HAS3 691 aa18.04■□□□□ 0.48
SEC13-213ENST00000445064 SLC4A7Q9Y6M7 1214 aa18.04■□□□□ 0.48
SEC13-213ENST00000445064 EYSQ5T1H1 3165 aa18.03■□□□□ 0.48
SEC13-213ENST00000445064 PARP1P09874 1014 aaKnown RBP18.03■□□□□ 0.48
SEC13-213ENST00000445064 LY6KQ17RY6 165 aa18.03■□□□□ 0.48
SEC13-213ENST00000445064 CCDC62Q6P9F0 684 aa18.03■□□□□ 0.48
SEC13-213ENST00000445064 FBXO11Q86XK2 927 aa18.03■□□□□ 0.48
SEC13-213ENST00000445064 MCF2L2Q86YR7 1114 aa18.03■□□□□ 0.48
SEC13-213ENST00000445064 STAG2Q8N3U4 1231 aa18.03■□□□□ 0.48
SEC13-213ENST00000445064 NSUN6Q8TEA1 469 aaKnown RBP18.03■□□□□ 0.48
SEC13-213ENST00000445064 PRDM6Q9NQX0 595 aa18.03■□□□□ 0.48
SEC13-213ENST00000445064 LAMA4Q16363 1823 aa18.02■□□□□ 0.48
SEC13-213ENST00000445064 MYOGP15173 224 aa18.02■□□□□ 0.48
SEC13-213ENST00000445064 ADGRE1Q14246 886 aa18.02■□□□□ 0.48
SEC13-213ENST00000445064 NFRKBQ6P4R8 1299 aa18.02■□□□□ 0.48
SEC13-213ENST00000445064 CHST3Q7LGC8 479 aa18.02■□□□□ 0.48
SEC13-213ENST00000445064 AFG1LQ8WV93 481 aa18.02■□□□□ 0.48
SEC13-213ENST00000445064 RMDN3Q96TC7 470 aa18.02■□□□□ 0.48
SEC13-213ENST00000445064 UBAC1Q9BSL1 405 aa18.02■□□□□ 0.48
SEC13-213ENST00000445064 MAF1Q9H063 256 aa18.02■□□□□ 0.48
SEC13-213ENST00000445064 CNNM2Q9H8M5 875 aa18.02■□□□□ 0.48
SEC13-213ENST00000445064 MRPL11Q9Y3B7 192 aaKnown RBP18.02■□□□□ 0.48
SEC13-213ENST00000445064 CFBP00751 764 aa18.01■□□□□ 0.47
SEC13-213ENST00000445064 IGFBP4P22692 258 aa18.01■□□□□ 0.47
SEC13-213ENST00000445064 PDE4AP27815 886 aa18.01■□□□□ 0.47
SEC13-213ENST00000445064 STXBP2Q15833 593 aa18.01■□□□□ 0.47
SEC13-213ENST00000445064 CCDC85BQ15834 202 aaPredicted RBP18.01■□□□□ 0.47
SEC13-213ENST00000445064 IFIT1BQ5T764 474 aaKnown RBP18.01■□□□□ 0.47
SEC13-213ENST00000445064 ARHGEF16Q5VV41 709 aa18.01■□□□□ 0.47
SEC13-213ENST00000445064 CYB5R4Q7L1T6 521 aa18.01■□□□□ 0.47
SEC13-213ENST00000445064 IWS1Q96ST2 819 aa18.01■□□□□ 0.47
SEC13-213ENST00000445064 GBF1Q92538 1859 aa18.01■□□□□ 0.47
SEC13-213ENST00000445064 KLRF2D3W0D1 207 aa18■□□□□ 0.47
SEC13-213ENST00000445064 GH1P01241 217 aa18■□□□□ 0.47
SEC13-213ENST00000445064 IQCF3P0C7M6 154 aa18■□□□□ 0.47
SEC13-213ENST00000445064 ATP2A2P16615 1042 aaKnown RBP18■□□□□ 0.47
SEC13-213ENST00000445064 EIF2AK2P19525 551 aaKnown RBP18■□□□□ 0.47
SEC13-213ENST00000445064 PTPN11Q06124 597 aaPredicted RBP18■□□□□ 0.47
SEC13-213ENST00000445064 ARHGAP1Q07960 439 aa18■□□□□ 0.47
SEC13-213ENST00000445064 SEC23AQ15436 765 aa18■□□□□ 0.47
SEC13-213ENST00000445064 RETREG2Q8NC44 543 aa18■□□□□ 0.47
SEC13-213ENST00000445064 SCN10AQ9Y5Y9 1956 aa17.99■□□□□ 0.47
SEC13-213ENST00000445064 PFKMP08237 780 aa17.99■□□□□ 0.47
SEC13-213ENST00000445064 MMP3P08254 477 aa17.99■□□□□ 0.47
SEC13-213ENST00000445064 GSPT1P15170 499 aaKnown RBP17.99■□□□□ 0.47
SEC13-213ENST00000445064 SYMPKQ92797 1274 aaKnown RBP17.99■□□□□ 0.47
SEC13-213ENST00000445064 AMNQ9BXJ7 453 aa17.99■□□□□ 0.47
SEC13-213ENST00000445064 DDX41Q9UJV9 622 aaKnown RBP17.99■□□□□ 0.47
SEC13-213ENST00000445064 NOD1Q9Y239 953 aa17.99■□□□□ 0.47
SEC13-213ENST00000445064 SUPT16HQ9Y5B9 1047 aaKnown RBP17.99■□□□□ 0.47
SEC13-213ENST00000445064 PCDHA11Q9Y5I1 949 aa17.99■□□□□ 0.47
SEC13-213ENST00000445064 SCN5AQ14524 2016 aa17.99■□□□□ 0.47
SEC13-213ENST00000445064 OPLAHO14841 1288 aa17.98■□□□□ 0.47
SEC13-213ENST00000445064 PPP1R11O60927 126 aaPredicted RBP17.98■□□□□ 0.47
SEC13-213ENST00000445064 NR3C2P08235 984 aa17.98■□□□□ 0.47
SEC13-213ENST00000445064 PTGISQ16647 500 aa17.98■□□□□ 0.47
SEC13-213ENST00000445064 TTC22Q5TAA0 569 aa17.98■□□□□ 0.47
SEC13-213ENST00000445064 PPP2R2DQ66LE6 453 aa17.98■□□□□ 0.47
SEC13-213ENST00000445064 KAT2BQ92831 832 aa17.98■□□□□ 0.47
SEC13-213ENST00000445064 FTOQ9C0B1 505 aaKnown RBP eCLIP17.98■□□□□ 0.47
SEC13-213ENST00000445064 PXMP2Q9NR77 195 aa17.98■□□□□ 0.47
SEC13-213ENST00000445064 MAD2L2Q9UI95 211 aa17.98■□□□□ 0.47
SEC13-213ENST00000445064 CDH23Q9H251 3354 aa17.97■□□□□ 0.47
SEC13-213ENST00000445064 PRUNE2Q8WUY3 3088 aa17.97■□□□□ 0.47
SEC13-213ENST00000445064 PITPNM1O00562 1244 aa17.97■□□□□ 0.47
SEC13-213ENST00000445064 EIF3JO75822 258 aaKnown RBP17.97■□□□□ 0.47
SEC13-213ENST00000445064 ACTN1P12814 892 aa17.97■□□□□ 0.47
SEC13-213ENST00000445064 CASTP20810 708 aaKnown RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms