RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 SMYD4Q8IYR2 804 aaPredicted RBP21.19■□□□□ 0.98
SEMA3D-202ENST00000444867 LRRC15Q8TF66 581 aa21.19■□□□□ 0.98
SEMA3D-202ENST00000444867 NAP1L5Q96NT1 182 aaPredicted RBP21.19■□□□□ 0.98
SEMA3D-202ENST00000444867 TRIM9Q9C026 710 aa21.19■□□□□ 0.98
SEMA3D-202ENST00000444867 KCNMB3Q9NPA1 279 aa21.19■□□□□ 0.98
SEMA3D-202ENST00000444867 CTNND2Q9UQB3 1225 aa21.19■□□□□ 0.98
SEMA3D-202ENST00000444867 DICER1Q9UPY3 1922 aaKnown RBP21.19■□□□□ 0.98
SEMA3D-202ENST00000444867 PHF20L1A8MW92 1017 aa21.18■□□□□ 0.98
SEMA3D-202ENST00000444867 TERF1P54274 439 aa21.18■□□□□ 0.98
SEMA3D-202ENST00000444867 CCZ1BP86790 482 aa21.18■□□□□ 0.98
SEMA3D-202ENST00000444867 CCZ1P86791 482 aaPredicted RBP21.18■□□□□ 0.98
SEMA3D-202ENST00000444867 ARHGAP4P98171 946 aa21.18■□□□□ 0.98
SEMA3D-202ENST00000444867 RASSF7Q02833 373 aa21.18■□□□□ 0.98
SEMA3D-202ENST00000444867 TPD52L1Q16890 204 aaPredicted RBP21.18■□□□□ 0.98
SEMA3D-202ENST00000444867 TMEM119Q4V9L6 283 aa21.18■□□□□ 0.98
SEMA3D-202ENST00000444867 SV2BQ7L1I2 683 aa21.18■□□□□ 0.98
SEMA3D-202ENST00000444867 SNX29Q8TEQ0 813 aa21.18■□□□□ 0.98
SEMA3D-202ENST00000444867 PNMA5Q96PV4 448 aa21.18■□□□□ 0.98
SEMA3D-202ENST00000444867 SYT17Q9BSW7 474 aa21.18■□□□□ 0.98
SEMA3D-202ENST00000444867 PCDHA12Q9UN75 941 aa21.18■□□□□ 0.98
SEMA3D-202ENST00000444867 KDM3AQ9Y4C1 1321 aa21.18■□□□□ 0.98
SEMA3D-202ENST00000444867 SFPQP23246 707 aaKnown RBP eCLIP21.18■□□□□ 0.98
SEMA3D-202ENST00000444867 STX17P56962 302 aa21.18■□□□□ 0.98
SEMA3D-202ENST00000444867 SPAG1Q07617 926 aa21.18■□□□□ 0.98
SEMA3D-202ENST00000444867 Q4G0T1 1027 aa21.18■□□□□ 0.98
SEMA3D-202ENST00000444867 HYIQ5T013 277 aa21.18■□□□□ 0.98
SEMA3D-202ENST00000444867 ADSSL1Q8N142 457 aa21.18■□□□□ 0.98
SEMA3D-202ENST00000444867 GIMAP8Q8ND71 665 aaPredicted RBP21.18■□□□□ 0.98
SEMA3D-202ENST00000444867 CNOT7Q9UIV1 285 aaKnown RBP21.18■□□□□ 0.98
SEMA3D-202ENST00000444867 A0A1B0GTH6 734 aa21.17■□□□□ 0.98
SEMA3D-202ENST00000444867 SKILP12757 684 aa21.17■□□□□ 0.98
SEMA3D-202ENST00000444867 CIITAP33076 1130 aa21.17■□□□□ 0.98
SEMA3D-202ENST00000444867 ARID5BQ14865 1188 aa21.17■□□□□ 0.98
SEMA3D-202ENST00000444867 CNNM4Q6P4Q7 775 aa21.17■□□□□ 0.98
SEMA3D-202ENST00000444867 C17orf53Q8N3J3 647 aaPredicted RBP21.17■□□□□ 0.98
SEMA3D-202ENST00000444867 NELFBQ8WX92 580 aa21.17■□□□□ 0.98
SEMA3D-202ENST00000444867 LARP4BQ92615 738 aaKnown RBP21.17■□□□□ 0.98
SEMA3D-202ENST00000444867 INTS13Q9NVM9 706 aa21.17■□□□□ 0.98
SEMA3D-202ENST00000444867 DOCK1Q14185 1865 aa21.17■□□□□ 0.98
SEMA3D-202ENST00000444867 POTEMA6NI47 508 aa21.16■□□□□ 0.98
SEMA3D-202ENST00000444867 OPLAHO14841 1288 aa21.16■□□□□ 0.98
SEMA3D-202ENST00000444867 CYP3A4P08684 503 aa21.16■□□□□ 0.98
SEMA3D-202ENST00000444867 PRCPP42785 496 aa21.16■□□□□ 0.98
SEMA3D-202ENST00000444867 NR1I3Q14994 352 aa21.16■□□□□ 0.98
SEMA3D-202ENST00000444867 COBLL1Q53SF7 1204 aa21.16■□□□□ 0.98
SEMA3D-202ENST00000444867 RAD54LQ92698 747 aa21.16■□□□□ 0.98
SEMA3D-202ENST00000444867 NT5C3AQ9H0P0 336 aa21.16■□□□□ 0.98
SEMA3D-202ENST00000444867 KCND1Q9NSA2 647 aa21.16■□□□□ 0.98
SEMA3D-202ENST00000444867 BLOC1S4Q9NUP1 217 aa21.16■□□□□ 0.98
SEMA3D-202ENST00000444867 EXOC1Q9NV70 894 aa21.16■□□□□ 0.98
SEMA3D-202ENST00000444867 GDAQ9Y2T3 454 aa21.16■□□□□ 0.98
SEMA3D-202ENST00000444867 MRPL11Q9Y3B7 192 aaKnown RBP21.16■□□□□ 0.98
SEMA3D-202ENST00000444867 STK24Q9Y6E0 443 aa21.16■□□□□ 0.98
SEMA3D-202ENST00000444867 GJA3Q9Y6H8 435 aa21.16■□□□□ 0.98
SEMA3D-202ENST00000444867 ABCB11O95342 1321 aa21.16■□□□□ 0.98
SEMA3D-202ENST00000444867 H7C1D1 291 aa21.15■□□□□ 0.98
SEMA3D-202ENST00000444867 PSMA7O14818 248 aa21.15■□□□□ 0.98
SEMA3D-202ENST00000444867 CTNND1O60716 968 aaKnown RBP21.15■□□□□ 0.98
SEMA3D-202ENST00000444867 KCNJ6P48051 423 aa21.15■□□□□ 0.98
SEMA3D-202ENST00000444867 ASIC1P78348 528 aa21.15■□□□□ 0.98
SEMA3D-202ENST00000444867 KIF4BQ2VIQ3 1234 aa21.15■□□□□ 0.98
SEMA3D-202ENST00000444867 FILIP1LQ4L180 1135 aa21.15■□□□□ 0.98
SEMA3D-202ENST00000444867 ARMCX5Q6P1M9 558 aa21.15■□□□□ 0.98
SEMA3D-202ENST00000444867 CCDC112Q8NEF3 446 aa21.15■□□□□ 0.98
SEMA3D-202ENST00000444867 LPAR1Q92633 364 aa21.15■□□□□ 0.98
SEMA3D-202ENST00000444867 HOOK2Q96ED9 719 aa21.15■□□□□ 0.98
SEMA3D-202ENST00000444867 DHTKD1Q96HY7 919 aaPredicted RBP21.15■□□□□ 0.98
SEMA3D-202ENST00000444867 PVALEFA0A1B0GWK0 134 aa21.15■□□□□ 0.98
SEMA3D-202ENST00000444867 EGFRP00533 1210 aa21.15■□□□□ 0.98
SEMA3D-202ENST00000444867 PRELPP51888 382 aa21.15■□□□□ 0.98
SEMA3D-202ENST00000444867 DNTTIP2Q5QJE6 756 aaKnown RBP21.15■□□□□ 0.98
SEMA3D-202ENST00000444867 SPECC1LQ69YQ0 1117 aa21.15■□□□□ 0.98
SEMA3D-202ENST00000444867 APTXQ7Z2E3 356 aaKnown RBP21.15■□□□□ 0.98
SEMA3D-202ENST00000444867 ANKRD20A12PQ8NF67 263 aa21.15■□□□□ 0.98
SEMA3D-202ENST00000444867 KIFC2Q96AC6 838 aa21.15■□□□□ 0.98
SEMA3D-202ENST00000444867 FAM20AQ96MK3 541 aa21.15■□□□□ 0.98
SEMA3D-202ENST00000444867 P2RX7Q99572 595 aaKnown RBP21.15■□□□□ 0.98
SEMA3D-202ENST00000444867 FEZ1Q99689 392 aa21.15■□□□□ 0.98
SEMA3D-202ENST00000444867 EHMT1Q9H9B1 1298 aa21.15■□□□□ 0.98
SEMA3D-202ENST00000444867 LIMA1Q9UHB6 759 aaKnown RBP21.15■□□□□ 0.98
SEMA3D-202ENST00000444867 HACL1Q9UJ83 578 aa21.15■□□□□ 0.98
SEMA3D-202ENST00000444867 WDR46O15213 610 aaKnown RBP21.14■□□□□ 0.97
SEMA3D-202ENST00000444867 PDE4DQ08499 809 aa21.14■□□□□ 0.97
SEMA3D-202ENST00000444867 TBX2Q13207 712 aaPredicted RBP21.14■□□□□ 0.97
SEMA3D-202ENST00000444867 HSP90AA4PQ58FG1 418 aa21.14■□□□□ 0.97
SEMA3D-202ENST00000444867 DCAF15Q66K64 600 aa21.14■□□□□ 0.97
SEMA3D-202ENST00000444867 SAMD7Q7Z3H4 446 aa21.14■□□□□ 0.97
SEMA3D-202ENST00000444867 ZNF341Q9BYN7 854 aa21.14■□□□□ 0.97
SEMA3D-202ENST00000444867 KIAA1683Q9H0B3 1180 aa21.14■□□□□ 0.97
SEMA3D-202ENST00000444867 SMCHD1A6NHR9 2005 aa21.13■□□□□ 0.97
SEMA3D-202ENST00000444867 LRRC10BA6NIK2 292 aa21.13■□□□□ 0.97
SEMA3D-202ENST00000444867 GCOM1H8Y6P7 765 aaPredicted RBP21.13■□□□□ 0.97
SEMA3D-202ENST00000444867 POLR2MP0CAP2 368 aa21.13■□□□□ 0.97
SEMA3D-202ENST00000444867 ZYXQ15942 572 aaKnown RBP21.13■□□□□ 0.97
SEMA3D-202ENST00000444867 TBC1D10BQ4KMP7 808 aaPredicted RBP21.13■□□□□ 0.97
SEMA3D-202ENST00000444867 UNC13DQ70J99 1090 aa21.13■□□□□ 0.97
SEMA3D-202ENST00000444867 APOBEC3FQ8IUX4 373 aaKnown RBP21.13■□□□□ 0.97
SEMA3D-202ENST00000444867 ETNPPLQ8TBG4 499 aa21.13■□□□□ 0.97
SEMA3D-202ENST00000444867 NOC3LQ8WTT2 800 aaKnown RBP21.13■□□□□ 0.97
SEMA3D-202ENST00000444867 DEFB129Q9H1M3 183 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms