RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 GCOM1H8Y6P7 765 aaPredicted RBP21.54■■□□□ 1.04
CCDC188-202ENST00000444532 CTAGE5O15320 804 aa21.54■■□□□ 1.04
CCDC188-202ENST00000444532 DYNC1LI2O43237 492 aaPredicted RBP21.54■■□□□ 1.04
CCDC188-202ENST00000444532 ZBTB43O43298 467 aa21.54■■□□□ 1.04
CCDC188-202ENST00000444532 ASGR1P07306 291 aa21.54■■□□□ 1.04
CCDC188-202ENST00000444532 POLR2MP0CAP2 368 aa21.54■■□□□ 1.04
CCDC188-202ENST00000444532 RCAN1P53805 252 aa21.54■■□□□ 1.04
CCDC188-202ENST00000444532 STXBP2Q15833 593 aa21.54■■□□□ 1.04
CCDC188-202ENST00000444532 TMTC3Q6ZXV5 915 aa21.54■■□□□ 1.04
CCDC188-202ENST00000444532 RAB11FIP4Q86YS3 637 aa21.54■■□□□ 1.04
CCDC188-202ENST00000444532 FBXL16Q8N461 479 aa21.54■■□□□ 1.04
CCDC188-202ENST00000444532 SCFD2Q8WU76 684 aa21.54■■□□□ 1.04
CCDC188-202ENST00000444532 PXMP2Q9NR77 195 aa21.54■■□□□ 1.04
CCDC188-202ENST00000444532 BRPF3Q9ULD4 1205 aa21.54■■□□□ 1.04
CCDC188-202ENST00000444532 ATP11BQ9Y2G3 1177 aa21.54■■□□□ 1.04
CCDC188-202ENST00000444532 ELP1O95163 1332 aa21.54■■□□□ 1.04
CCDC188-202ENST00000444532 NKRFO15226 690 aaKnown RBP eCLIP21.53■■□□□ 1.04
CCDC188-202ENST00000444532 IRX5P78411 483 aaPredicted RBP21.53■■□□□ 1.04
CCDC188-202ENST00000444532 FSCN1Q16658 493 aaKnown RBP21.53■■□□□ 1.04
CCDC188-202ENST00000444532 CHRDL2Q6WN34 429 aa21.53■■□□□ 1.04
CCDC188-202ENST00000444532 CMTR1Q8N1G2 835 aaKnown RBP21.53■■□□□ 1.04
CCDC188-202ENST00000444532 GLT1D1Q96MS3 346 aa21.53■■□□□ 1.04
CCDC188-202ENST00000444532 STARD7Q9NQZ5 370 aa21.53■■□□□ 1.04
CCDC188-202ENST00000444532 KLF18A0A0U1RQI7 1052 aa21.52■■□□□ 1.04
CCDC188-202ENST00000444532 ZEB2O60315 1214 aa21.52■■□□□ 1.04
CCDC188-202ENST00000444532 CPA1P15085 419 aa21.52■■□□□ 1.04
CCDC188-202ENST00000444532 SYN1P17600 705 aa21.52■■□□□ 1.04
CCDC188-202ENST00000444532 RPS6KB1P23443 525 aa21.52■■□□□ 1.04
CCDC188-202ENST00000444532 BEX3Q00994 111 aa21.52■■□□□ 1.04
CCDC188-202ENST00000444532 PPP2R5BQ15173 497 aa21.52■■□□□ 1.04
CCDC188-202ENST00000444532 RTN1Q16799 776 aa21.52■■□□□ 1.04
CCDC188-202ENST00000444532 TRIM60Q495X7 471 aa21.52■■□□□ 1.04
CCDC188-202ENST00000444532 TMEM63BQ5T3F8 832 aa21.52■■□□□ 1.04
CCDC188-202ENST00000444532 KIAA1217Q5T5P2 1943 aa21.52■■□□□ 1.04
CCDC188-202ENST00000444532 EIF3JO75822 258 aaKnown RBP21.51■■□□□ 1.03
CCDC188-202ENST00000444532 NR3C2P08235 984 aa21.51■■□□□ 1.03
CCDC188-202ENST00000444532 EIF2AK2P19525 551 aaKnown RBP21.51■■□□□ 1.03
CCDC188-202ENST00000444532 HOXA13P31271 388 aaPredicted RBP21.51■■□□□ 1.03
CCDC188-202ENST00000444532 TTLL4Q14679 1199 aa21.51■■□□□ 1.03
CCDC188-202ENST00000444532 HABP4Q5JVS0 413 aaKnown RBP21.51■■□□□ 1.03
CCDC188-202ENST00000444532 Q6ZUG5 572 aa21.51■■□□□ 1.03
CCDC188-202ENST00000444532 CCDC82Q8N4S0 544 aa21.51■■□□□ 1.03
CCDC188-202ENST00000444532 PRO3102Q9H379 93 aa21.51■■□□□ 1.03
CCDC188-202ENST00000444532 CABYRO75952 493 aa21.5■■□□□ 1.03
CCDC188-202ENST00000444532 TXNP10599 105 aaKnown RBP21.5■■□□□ 1.03
CCDC188-202ENST00000444532 CASTP20810 708 aaKnown RBP21.5■■□□□ 1.03
CCDC188-202ENST00000444532 VTI1AQ96AJ9 217 aa21.5■■□□□ 1.03
CCDC188-202ENST00000444532 GDF15Q99988 308 aa21.5■■□□□ 1.03
CCDC188-202ENST00000444532 PDCD2LQ9BRP1 358 aa21.5■■□□□ 1.03
CCDC188-202ENST00000444532 AGXT2Q9BYV1 514 aa21.5■■□□□ 1.03
CCDC188-202ENST00000444532 PRKAG2Q9UGJ0 569 aa21.5■■□□□ 1.03
CCDC188-202ENST00000444532 GOLGA8AA7E2F4 631 aa21.49■■□□□ 1.03
CCDC188-202ENST00000444532 GOLGA8BA8MQT2 603 aa21.49■■□□□ 1.03
CCDC188-202ENST00000444532 PTGS1P23219 599 aa21.49■■□□□ 1.03
CCDC188-202ENST00000444532 BMP8BP34820 402 aa21.49■■□□□ 1.03
CCDC188-202ENST00000444532 TLE2Q04725 743 aa21.49■■□□□ 1.03
CCDC188-202ENST00000444532 RUFY3Q7L099 469 aa21.49■■□□□ 1.03
CCDC188-202ENST00000444532 ANKRD33Q7Z3H0 272 aa21.49■■□□□ 1.03
CCDC188-202ENST00000444532 FCHSD1Q86WN1 690 aa21.49■■□□□ 1.03
CCDC188-202ENST00000444532 BRF1Q92994 677 aa21.49■■□□□ 1.03
CCDC188-202ENST00000444532 CUL5Q93034 780 aa21.49■■□□□ 1.03
CCDC188-202ENST00000444532 TOX2Q96NM4 488 aa21.49■■□□□ 1.03
CCDC188-202ENST00000444532 TM6SF1Q9BZW5 370 aa21.49■■□□□ 1.03
CCDC188-202ENST00000444532 ZSWIM6Q9HCJ5 1215 aa21.49■■□□□ 1.03
CCDC188-202ENST00000444532 RBM27Q9P2N5 1060 aaKnown RBP21.49■■□□□ 1.03
CCDC188-202ENST00000444532 A0A0U1RQG5 324 aaPredicted RBP21.48■■□□□ 1.03
CCDC188-202ENST00000444532 CCDC196A0A1B0GTZ2 297 aa21.48■■□□□ 1.03
CCDC188-202ENST00000444532 PIK3CDO00329 1044 aa21.48■■□□□ 1.03
CCDC188-202ENST00000444532 EIF5BO60841 1220 aaKnown RBP21.48■■□□□ 1.03
CCDC188-202ENST00000444532 CPT1AP50416 773 aa21.48■■□□□ 1.03
CCDC188-202ENST00000444532 APOBRQ0VD83 1088 aa21.48■■□□□ 1.03
CCDC188-202ENST00000444532 PGM5Q15124 567 aa21.48■■□□□ 1.03
CCDC188-202ENST00000444532 BRDTQ58F21 947 aaPredicted RBP21.48■■□□□ 1.03
CCDC188-202ENST00000444532 CCDC62Q6P9F0 684 aa21.48■■□□□ 1.03
CCDC188-202ENST00000444532 SEPT14Q6ZU15 432 aa21.48■■□□□ 1.03
CCDC188-202ENST00000444532 VSIG10LQ86VR7 867 aa21.48■■□□□ 1.03
CCDC188-202ENST00000444532 OR6J1Q8NGC5 347 aa21.48■■□□□ 1.03
CCDC188-202ENST00000444532 FAM217BQ9NTX9 383 aaPredicted RBP21.48■■□□□ 1.03
CCDC188-202ENST00000444532 NAP1L2Q9ULW6 460 aaPredicted RBP21.48■■□□□ 1.03
CCDC188-202ENST00000444532 MROH7Q68CQ1 1323 aa21.48■■□□□ 1.03
CCDC188-202ENST00000444532 A0A1W2PPC1 479 aa21.47■■□□□ 1.03
CCDC188-202ENST00000444532 DCDC2CA8MYV0 355 aa21.47■■□□□ 1.03
CCDC188-202ENST00000444532 MAGEA10P43363 369 aaPredicted RBP21.47■■□□□ 1.03
CCDC188-202ENST00000444532 METAP2P50579 478 aaKnown RBP eCLIP21.47■■□□□ 1.03
CCDC188-202ENST00000444532 CDK7P50613 346 aa21.47■■□□□ 1.03
CCDC188-202ENST00000444532 FUT2Q10981 343 aa21.47■■□□□ 1.03
CCDC188-202ENST00000444532 CXCL17Q6UXB2 119 aa21.47■■□□□ 1.03
CCDC188-202ENST00000444532 SMARCC2Q8TAQ2 1214 aa21.47■■□□□ 1.03
CCDC188-202ENST00000444532 SEZ6LQ9BYH1 1024 aa21.47■■□□□ 1.03
CCDC188-202ENST00000444532 PSTPIP2Q9H939 334 aa21.47■■□□□ 1.03
CCDC188-202ENST00000444532 POLR3EQ9NVU0 708 aa21.47■■□□□ 1.03
CCDC188-202ENST00000444532 CYP46A1Q9Y6A2 500 aa21.47■■□□□ 1.03
CCDC188-202ENST00000444532 CNTNAP5Q8WYK1 1306 aa21.47■■□□□ 1.03
CCDC188-202ENST00000444532 hCG_1642624A0A1W2PR95 340 aa21.46■■□□□ 1.03
CCDC188-202ENST00000444532 ARVCFO00192 962 aa21.46■■□□□ 1.03
CCDC188-202ENST00000444532 MEIS2O14770 477 aa21.46■■□□□ 1.03
CCDC188-202ENST00000444532 PQBP1O60828 265 aaKnown RBP21.46■■□□□ 1.03
CCDC188-202ENST00000444532 ARIH2O95376 493 aa21.46■■□□□ 1.03
CCDC188-202ENST00000444532 MYCLP12524 364 aaPredicted RBP21.46■■□□□ 1.03
CCDC188-202ENST00000444532 CDC27P30260 824 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms