RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 TNFAIP2Q03169 654 aa20.1■□□□□ 0.81
SMARCAL1-209ENST00000444508 STK3Q13188 491 aa20.1■□□□□ 0.81
SMARCAL1-209ENST00000444508 WWC2Q6AWC2 1192 aa20.1■□□□□ 0.81
SMARCAL1-209ENST00000444508 PPP1R18Q6NYC8 613 aa20.1■□□□□ 0.81
SMARCAL1-209ENST00000444508 CPLX2Q6PUV4 134 aaKnown RBP20.1■□□□□ 0.81
SMARCAL1-209ENST00000444508 FCHSD1Q86WN1 690 aa20.1■□□□□ 0.81
SMARCAL1-209ENST00000444508 SMARCC2Q8TAQ2 1214 aa20.1■□□□□ 0.81
SMARCAL1-209ENST00000444508 LENG1Q96BZ8 264 aaPredicted RBP20.1■□□□□ 0.81
SMARCAL1-209ENST00000444508 C11orf49Q9H6J7 331 aa20.1■□□□□ 0.81
SMARCAL1-209ENST00000444508 PSTPIP2Q9H939 334 aa20.1■□□□□ 0.81
SMARCAL1-209ENST00000444508 PXMP2Q9NR77 195 aa20.1■□□□□ 0.81
SMARCAL1-209ENST00000444508 KBTBD13C9JR72 458 aa20.09■□□□□ 0.81
SMARCAL1-209ENST00000444508 DNM1LO00429 736 aa20.09■□□□□ 0.81
SMARCAL1-209ENST00000444508 IFNAR1P17181 557 aa20.09■□□□□ 0.81
SMARCAL1-209ENST00000444508 ADCYAP1R1P41586 468 aa20.09■□□□□ 0.81
SMARCAL1-209ENST00000444508 NAPAP54920 295 aa20.09■□□□□ 0.81
SMARCAL1-209ENST00000444508 STXBP2Q15833 593 aa20.09■□□□□ 0.81
SMARCAL1-209ENST00000444508 GJC2Q5T442 439 aaPredicted RBP20.09■□□□□ 0.81
SMARCAL1-209ENST00000444508 IQSEC1Q6DN90 963 aa20.09■□□□□ 0.81
SMARCAL1-209ENST00000444508 RNF180Q86T96 592 aa20.09■□□□□ 0.81
SMARCAL1-209ENST00000444508 HTATIP2Q9BUP3 242 aa20.09■□□□□ 0.81
SMARCAL1-209ENST00000444508 SPC25Q9HBM1 224 aa20.09■□□□□ 0.81
SMARCAL1-209ENST00000444508 TNRC18O15417 2968 aaPredicted RBP20.08■□□□□ 0.81
SMARCAL1-209ENST00000444508 PIK3CDO00329 1044 aa20.08■□□□□ 0.81
SMARCAL1-209ENST00000444508 PRPF3O43395 683 aaKnown RBP20.08■□□□□ 0.81
SMARCAL1-209ENST00000444508 PGK1P00558 417 aa20.08■□□□□ 0.81
SMARCAL1-209ENST00000444508 NR3C2P08235 984 aa20.08■□□□□ 0.81
SMARCAL1-209ENST00000444508 SCG2P13521 617 aa20.08■□□□□ 0.81
SMARCAL1-209ENST00000444508 MNX1P50219 401 aaPredicted RBP20.08■□□□□ 0.81
SMARCAL1-209ENST00000444508 LRRC41Q15345 812 aa20.08■□□□□ 0.81
SMARCAL1-209ENST00000444508 PFKFB3Q16875 520 aaPredicted RBP20.08■□□□□ 0.81
SMARCAL1-209ENST00000444508 TAPT1Q6NXT6 567 aa20.08■□□□□ 0.81
SMARCAL1-209ENST00000444508 TRIM22Q8IYM9 498 aa20.08■□□□□ 0.81
SMARCAL1-209ENST00000444508 PHKBQ93100 1093 aa20.08■□□□□ 0.81
SMARCAL1-209ENST00000444508 SLC26A6Q9BXS9 759 aa20.08■□□□□ 0.81
SMARCAL1-209ENST00000444508 RNF26Q9BY78 433 aaPredicted RBP20.08■□□□□ 0.81
SMARCAL1-209ENST00000444508 SLKQ9H2G2 1235 aaPredicted RBP20.08■□□□□ 0.81
SMARCAL1-209ENST00000444508 PDGFCQ9NRA1 345 aa20.08■□□□□ 0.81
SMARCAL1-209ENST00000444508 BARHL2Q9NY43 387 aa20.08■□□□□ 0.81
SMARCAL1-209ENST00000444508 TPCN1Q9ULQ1 816 aa20.08■□□□□ 0.81
SMARCAL1-209ENST00000444508 SYNRGQ9UMZ2 1314 aa20.07■□□□□ 0.8
SMARCAL1-209ENST00000444508 RBM25P49756 843 aaKnown RBP20.07■□□□□ 0.8
SMARCAL1-209ENST00000444508 NTRK3Q16288 839 aa20.07■□□□□ 0.8
SMARCAL1-209ENST00000444508 USP17L6PQ6QN14 398 aa20.07■□□□□ 0.8
SMARCAL1-209ENST00000444508 SCFD2Q8WU76 684 aa20.07■□□□□ 0.8
SMARCAL1-209ENST00000444508 PDCD2LQ9BRP1 358 aa20.07■□□□□ 0.8
SMARCAL1-209ENST00000444508 WDR11Q9BZH6 1224 aa20.07■□□□□ 0.8
SMARCAL1-209ENST00000444508 PDE4DIPQ5VU43 2346 aa20.07■□□□□ 0.8
SMARCAL1-209ENST00000444508 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.06■□□□□ 0.8
SMARCAL1-209ENST00000444508 STXBP3O00186 592 aa20.06■□□□□ 0.8
SMARCAL1-209ENST00000444508 MEIS2O14770 477 aa20.06■□□□□ 0.8
SMARCAL1-209ENST00000444508 ADCY6O43306 1168 aa20.06■□□□□ 0.8
SMARCAL1-209ENST00000444508 EIF3JO75822 258 aaKnown RBP20.06■□□□□ 0.8
SMARCAL1-209ENST00000444508 CDKL5O76039 1030 aa20.06■□□□□ 0.8
SMARCAL1-209ENST00000444508 C6orf222P0C671 652 aaPredicted RBP20.06■□□□□ 0.8
SMARCAL1-209ENST00000444508 MYCLP12524 364 aaPredicted RBP20.06■□□□□ 0.8
SMARCAL1-209ENST00000444508 SMPD1P17405 629 aa20.06■□□□□ 0.8
SMARCAL1-209ENST00000444508 ADCY7P51828 1080 aa20.06■□□□□ 0.8
SMARCAL1-209ENST00000444508 PGM5Q15124 567 aa20.06■□□□□ 0.8
SMARCAL1-209ENST00000444508 TEX2Q8IWB9 1127 aa20.06■□□□□ 0.8
SMARCAL1-209ENST00000444508 CCDC12Q8WUD4 166 aaPredicted RBP20.06■□□□□ 0.8
SMARCAL1-209ENST00000444508 AP5M1Q9H0R1 490 aa20.06■□□□□ 0.8
SMARCAL1-209ENST00000444508 GLT8D2Q9H1C3 349 aa20.06■□□□□ 0.8
SMARCAL1-209ENST00000444508 MKI67P46013 3256 aaKnown RBP20.05■□□□□ 0.8
SMARCAL1-209ENST00000444508 RBM47A0AV96 593 aaKnown RBP20.05■□□□□ 0.8
SMARCAL1-209ENST00000444508 PFKFB2O60825 505 aa20.05■□□□□ 0.8
SMARCAL1-209ENST00000444508 ADAMTS4O75173 837 aa20.05■□□□□ 0.8
SMARCAL1-209ENST00000444508 COL6A1P12109 1028 aa20.05■□□□□ 0.8
SMARCAL1-209ENST00000444508 CCND2P30279 289 aa20.05■□□□□ 0.8
SMARCAL1-209ENST00000444508 GJA9P57773 515 aa20.05■□□□□ 0.8
SMARCAL1-209ENST00000444508 SSRP1Q08945 709 aaKnown RBP20.05■□□□□ 0.8
SMARCAL1-209ENST00000444508 TTLL4Q14679 1199 aa20.05■□□□□ 0.8
SMARCAL1-209ENST00000444508 DUSP28Q4G0W2 176 aa20.05■□□□□ 0.8
SMARCAL1-209ENST00000444508 TLK2Q86UE8 772 aa20.05■□□□□ 0.8
SMARCAL1-209ENST00000444508 UPF3AQ9H1J1 476 aaKnown RBP20.05■□□□□ 0.8
SMARCAL1-209ENST00000444508 RIC8AQ9NPQ8 531 aa20.05■□□□□ 0.8
SMARCAL1-209ENST00000444508 SMCO2A6NFE2 343 aa20.04■□□□□ 0.8
SMARCAL1-209ENST00000444508 SPDYE3A6NKU9 549 aa20.04■□□□□ 0.8
SMARCAL1-209ENST00000444508 PPFIA3O75145 1194 aa20.04■□□□□ 0.8
SMARCAL1-209ENST00000444508 SCRN1Q12765 414 aa20.04■□□□□ 0.8
SMARCAL1-209ENST00000444508 UBE2SQ16763 222 aa20.04■□□□□ 0.8
SMARCAL1-209ENST00000444508 TYW1BQ6NUM6 668 aa20.04■□□□□ 0.8
SMARCAL1-209ENST00000444508 SEPT14Q6ZU15 432 aa20.04■□□□□ 0.8
SMARCAL1-209ENST00000444508 VSIG10LQ86VR7 867 aa20.04■□□□□ 0.8
SMARCAL1-209ENST00000444508 DPF3Q92784 378 aa20.04■□□□□ 0.8
SMARCAL1-209ENST00000444508 SENP6Q9GZR1 1112 aaPredicted RBP20.04■□□□□ 0.8
SMARCAL1-209ENST00000444508 GNEQ9Y223 722 aaKnown RBP20.04■□□□□ 0.8
SMARCAL1-209ENST00000444508 Q9Y3F1 56 aa20.04■□□□□ 0.8
SMARCAL1-209ENST00000444508 FRMPD4Q14CM0 1322 aa20.03■□□□□ 0.8
SMARCAL1-209ENST00000444508 NKRFO15226 690 aaKnown RBP eCLIP20.03■□□□□ 0.8
SMARCAL1-209ENST00000444508 DYNC1LI2O43237 492 aaPredicted RBP20.03■□□□□ 0.8
SMARCAL1-209ENST00000444508 TXNP10599 105 aaKnown RBP20.03■□□□□ 0.8
SMARCAL1-209ENST00000444508 PKN1Q16512 942 aa20.03■□□□□ 0.8
SMARCAL1-209ENST00000444508 GNASQ5JWF2 1037 aa20.03■□□□□ 0.8
SMARCAL1-209ENST00000444508 PCSK9Q8NBP7 692 aaKnown RBP20.03■□□□□ 0.8
SMARCAL1-209ENST00000444508 CCDC148Q8NFR7 591 aa20.03■□□□□ 0.8
SMARCAL1-209ENST00000444508 IL31RAQ8NI17 732 aa20.03■□□□□ 0.8
SMARCAL1-209ENST00000444508 TSEN34Q9BSV6 310 aaKnown RBP20.03■□□□□ 0.8
SMARCAL1-209ENST00000444508 EHMT1Q9H9B1 1298 aa20.03■□□□□ 0.8
SMARCAL1-209ENST00000444508 KIAA1217Q5T5P2 1943 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms