RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 GUCD1Q96NT3 240 aa16.28■□□□□ 0.2
TREX1-202ENST00000444177 MPHOSPH6Q99547 160 aaKnown RBP16.28■□□□□ 0.2
TREX1-202ENST00000444177 SEZ6LQ9BYH1 1024 aa16.28■□□□□ 0.2
TREX1-202ENST00000444177 SEMA6BQ9H3T3 888 aa16.28■□□□□ 0.2
TREX1-202ENST00000444177 JMJD4Q9H9V9 463 aa16.28■□□□□ 0.2
TREX1-202ENST00000444177 LY9Q9HBG7 655 aa16.28■□□□□ 0.2
TREX1-202ENST00000444177 GPHNQ9NQX3 736 aaPredicted RBP16.28■□□□□ 0.2
TREX1-202ENST00000444177 ABCB11O95342 1321 aa16.27■□□□□ 0.2
TREX1-202ENST00000444177 PALM3A6NDB9 673 aaPredicted RBP16.27■□□□□ 0.2
TREX1-202ENST00000444177 B4DLN1 442 aa16.27■□□□□ 0.2
TREX1-202ENST00000444177 MRPL12P52815 198 aaKnown RBP16.27■□□□□ 0.2
TREX1-202ENST00000444177 PSMC6P62333 389 aa16.27■□□□□ 0.2
TREX1-202ENST00000444177 PPIGQ13427 754 aaKnown RBP eCLIP16.27■□□□□ 0.2
TREX1-202ENST00000444177 COL9A3Q14050 684 aaPredicted RBP16.27■□□□□ 0.2
TREX1-202ENST00000444177 FBXO11Q86XK2 927 aa16.27■□□□□ 0.2
TREX1-202ENST00000444177 HOMER1Q86YM7 354 aa16.27■□□□□ 0.2
TREX1-202ENST00000444177 ZNF654Q8IZM8 581 aa16.27■□□□□ 0.2
TREX1-202ENST00000444177 TMEM199Q8N511 208 aa16.27■□□□□ 0.2
TREX1-202ENST00000444177 TMEM87BQ96K49 555 aa16.27■□□□□ 0.2
TREX1-202ENST00000444177 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.27■□□□□ 0.2
TREX1-202ENST00000444177 MYL10Q9BUA6 226 aa16.27■□□□□ 0.2
TREX1-202ENST00000444177 PPP1R12CQ9BZL4 782 aa16.27■□□□□ 0.2
TREX1-202ENST00000444177 MAF1Q9H063 256 aa16.27■□□□□ 0.2
TREX1-202ENST00000444177 MYH6P13533 1939 aa16.26■□□□□ 0.19
TREX1-202ENST00000444177 CCDC69A6NI79 296 aa16.26■□□□□ 0.19
TREX1-202ENST00000444177 DDAH1O94760 285 aa16.26■□□□□ 0.19
TREX1-202ENST00000444177 CSF2RAP15509 400 aa16.26■□□□□ 0.19
TREX1-202ENST00000444177 TROAPQ12815 778 aa16.26■□□□□ 0.19
TREX1-202ENST00000444177 NEK1Q96PY6 1258 aa16.26■□□□□ 0.19
TREX1-202ENST00000444177 MTA3Q9BTC8 594 aa16.26■□□□□ 0.19
TREX1-202ENST00000444177 LRRC2Q9BYS8 371 aa16.26■□□□□ 0.19
TREX1-202ENST00000444177 TRPV6Q9H1D0 765 aa16.26■□□□□ 0.19
TREX1-202ENST00000444177 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.25■□□□□ 0.19
TREX1-202ENST00000444177 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.25■□□□□ 0.19
TREX1-202ENST00000444177 NKRFO15226 690 aaKnown RBP eCLIP16.25■□□□□ 0.19
TREX1-202ENST00000444177 TXNP10599 105 aaKnown RBP16.25■□□□□ 0.19
TREX1-202ENST00000444177 CYP2C18P33260 490 aa16.25■□□□□ 0.19
TREX1-202ENST00000444177 CPT1AP50416 773 aa16.25■□□□□ 0.19
TREX1-202ENST00000444177 TMEM240Q5SV17 173 aa16.25■□□□□ 0.19
TREX1-202ENST00000444177 MCF2L2Q86YR7 1114 aa16.25■□□□□ 0.19
TREX1-202ENST00000444177 OR6J1Q8NGC5 347 aa16.25■□□□□ 0.19
TREX1-202ENST00000444177 CTCFLQ8NI51 663 aaPredicted RBP16.25■□□□□ 0.19
TREX1-202ENST00000444177 SYTL5Q8TDW5 730 aaPredicted RBP16.25■□□□□ 0.19
TREX1-202ENST00000444177 SCFD2Q8WU76 684 aa16.25■□□□□ 0.19
TREX1-202ENST00000444177 TAAR1Q96RJ0 339 aa16.25■□□□□ 0.19
TREX1-202ENST00000444177 POLR3EQ9NVU0 708 aa16.25■□□□□ 0.19
TREX1-202ENST00000444177 MRPL11Q9Y3B7 192 aaKnown RBP16.25■□□□□ 0.19
TREX1-202ENST00000444177 ZBTB5O15062 677 aa16.24■□□□□ 0.19
TREX1-202ENST00000444177 REC8O95072 547 aa16.24■□□□□ 0.19
TREX1-202ENST00000444177 MYL3P08590 195 aa16.24■□□□□ 0.19
TREX1-202ENST00000444177 ACRP10323 421 aa16.24■□□□□ 0.19
TREX1-202ENST00000444177 PURAQ00577 322 aaKnown RBP16.24■□□□□ 0.19
TREX1-202ENST00000444177 KRT32Q14532 448 aa16.24■□□□□ 0.19
TREX1-202ENST00000444177 PPP2R5BQ15173 497 aa16.24■□□□□ 0.19
TREX1-202ENST00000444177 ZNF365Q70YC5 407 aa16.24■□□□□ 0.19
TREX1-202ENST00000444177 RASEFQ8IZ41 740 aa16.24■□□□□ 0.19
TREX1-202ENST00000444177 NSUN6Q8TEA1 469 aaKnown RBP16.24■□□□□ 0.19
TREX1-202ENST00000444177 COPS5Q92905 334 aa16.24■□□□□ 0.19
TREX1-202ENST00000444177 CDX2Q99626 313 aaPredicted RBP16.24■□□□□ 0.19
TREX1-202ENST00000444177 AMNQ9BXJ7 453 aa16.24■□□□□ 0.19
TREX1-202ENST00000444177 TTYH1Q9H313 450 aaPredicted RBP16.24■□□□□ 0.19
TREX1-202ENST00000444177 HIPK3Q9H422 1215 aa16.24■□□□□ 0.19
TREX1-202ENST00000444177 COL20A1Q9P218 1284 aa16.24■□□□□ 0.19
TREX1-202ENST00000444177 B4GALT4O60513 344 aa16.23■□□□□ 0.19
TREX1-202ENST00000444177 RXRAP19793 462 aa16.23■□□□□ 0.19
TREX1-202ENST00000444177 KIF5BP33176 963 aa16.23■□□□□ 0.19
TREX1-202ENST00000444177 LIFRP42702 1097 aa16.23■□□□□ 0.19
TREX1-202ENST00000444177 TTLL4Q14679 1199 aa16.23■□□□□ 0.19
TREX1-202ENST00000444177 SLC35G1Q2M3R5 365 aa16.23■□□□□ 0.19
TREX1-202ENST00000444177 ADCK5Q3MIX3 580 aa16.23■□□□□ 0.19
TREX1-202ENST00000444177 BRDTQ58F21 947 aaPredicted RBP16.23■□□□□ 0.19
TREX1-202ENST00000444177 RAB11FIP4Q86YS3 637 aa16.23■□□□□ 0.19
TREX1-202ENST00000444177 TMTC2Q8N394 836 aa16.23■□□□□ 0.19
TREX1-202ENST00000444177 PIBF1Q8WXW3 757 aa16.23■□□□□ 0.19
TREX1-202ENST00000444177 MTMR8Q96EF0 704 aa16.23■□□□□ 0.19
TREX1-202ENST00000444177 TCEANC2Q96MN5 208 aa16.23■□□□□ 0.19
TREX1-202ENST00000444177 PIGSQ96S52 555 aa16.23■□□□□ 0.19
TREX1-202ENST00000444177 RMDN3Q96TC7 470 aa16.23■□□□□ 0.19
TREX1-202ENST00000444177 MTG1Q9BT17 334 aaPredicted RBP16.23■□□□□ 0.19
TREX1-202ENST00000444177 NOC4LQ9BVI4 516 aaKnown RBP16.23■□□□□ 0.19
TREX1-202ENST00000444177 ALDH8A1Q9H2A2 487 aaPredicted RBP16.23■□□□□ 0.19
TREX1-202ENST00000444177 IL23AQ9NPF7 189 aa16.23■□□□□ 0.19
TREX1-202ENST00000444177 SLC12A7Q9Y666 1083 aa16.23■□□□□ 0.19
TREX1-202ENST00000444177 UMODL1Q5DID0 1318 aa16.22■□□□□ 0.19
TREX1-202ENST00000444177 A6NJR5 290 aa16.22■□□□□ 0.19
TREX1-202ENST00000444177 CYTH3O43739 400 aa16.22■□□□□ 0.19
TREX1-202ENST00000444177 KPNA6O60684 536 aa16.22■□□□□ 0.19
TREX1-202ENST00000444177 PPP1R11O60927 126 aaPredicted RBP16.22■□□□□ 0.19
TREX1-202ENST00000444177 ARIH2O95376 493 aa16.22■□□□□ 0.19
TREX1-202ENST00000444177 RASIP1Q5U651 963 aa16.22■□□□□ 0.19
TREX1-202ENST00000444177 CCDC62Q6P9F0 684 aa16.22■□□□□ 0.19
TREX1-202ENST00000444177 MICU3Q86XE3 530 aa16.22■□□□□ 0.19
TREX1-202ENST00000444177 IWS1Q96ST2 819 aa16.22■□□□□ 0.19
TREX1-202ENST00000444177 MAP3K14Q99558 947 aa16.22■□□□□ 0.19
TREX1-202ENST00000444177 RIOX1Q9H6W3 641 aa16.22■□□□□ 0.19
TREX1-202ENST00000444177 TRMT13Q9NUP7 481 aaKnown RBP16.22■□□□□ 0.19
TREX1-202ENST00000444177 MYO9BQ13459 2157 aa16.21■□□□□ 0.19
TREX1-202ENST00000444177 PLEKHA8P1O95397 391 aa16.21■□□□□ 0.19
TREX1-202ENST00000444177 CFBP00751 764 aa16.21■□□□□ 0.19
TREX1-202ENST00000444177 SUPT20HL2P0C7V6 817 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms