RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 HOMER1Q86YM7 354 aa21.84■■□□□ 1.09
ATPAF2-201ENST00000444058 NEK1Q96PY6 1258 aa21.84■■□□□ 1.09
ATPAF2-201ENST00000444058 TAAR1Q96RJ0 339 aa21.84■■□□□ 1.09
ATPAF2-201ENST00000444058 GPHNQ9NQX3 736 aaPredicted RBP21.84■■□□□ 1.09
ATPAF2-201ENST00000444058 ARVCFO00192 962 aa21.83■■□□□ 1.09
ATPAF2-201ENST00000444058 KIAA0355O15063 1070 aa21.83■■□□□ 1.09
ATPAF2-201ENST00000444058 PQBP1O60828 265 aaKnown RBP21.83■■□□□ 1.09
ATPAF2-201ENST00000444058 CFBP00751 764 aa21.83■■□□□ 1.09
ATPAF2-201ENST00000444058 BEX3Q00994 111 aa21.83■■□□□ 1.09
ATPAF2-201ENST00000444058 STXBP2Q15833 593 aa21.83■■□□□ 1.09
ATPAF2-201ENST00000444058 NFXL1Q6ZNB6 911 aa21.83■■□□□ 1.09
ATPAF2-201ENST00000444058 PRDM5Q9NQX1 630 aaPredicted RBP21.83■■□□□ 1.09
ATPAF2-201ENST00000444058 MYH6P13533 1939 aa21.82■■□□□ 1.08
ATPAF2-201ENST00000444058 TRIM43BA6NCK2 446 aa21.82■■□□□ 1.08
ATPAF2-201ENST00000444058 FAAP100Q0VG06 881 aa21.82■■□□□ 1.08
ATPAF2-201ENST00000444058 COL9A3Q14050 684 aaPredicted RBP21.82■■□□□ 1.08
ATPAF2-201ENST00000444058 TTLL4Q14679 1199 aa21.82■■□□□ 1.08
ATPAF2-201ENST00000444058 PPP2R5BQ15173 497 aa21.82■■□□□ 1.08
ATPAF2-201ENST00000444058 LRIT3Q3SXY7 679 aa21.82■■□□□ 1.08
ATPAF2-201ENST00000444058 TMEM63BQ5T3F8 832 aa21.82■■□□□ 1.08
ATPAF2-201ENST00000444058 VTI1AQ96AJ9 217 aa21.82■■□□□ 1.08
ATPAF2-201ENST00000444058 TRIM43Q96BQ3 446 aaPredicted RBP21.82■■□□□ 1.08
ATPAF2-201ENST00000444058 SLC12A7Q9Y666 1083 aa21.82■■□□□ 1.08
ATPAF2-201ENST00000444058 HMGB1P09429 215 aaKnown RBP21.81■■□□□ 1.08
ATPAF2-201ENST00000444058 CPT1AP50416 773 aa21.81■■□□□ 1.08
ATPAF2-201ENST00000444058 EXOSC10Q01780 885 aaKnown RBP21.81■■□□□ 1.08
ATPAF2-201ENST00000444058 BRDTQ58F21 947 aaPredicted RBP21.81■■□□□ 1.08
ATPAF2-201ENST00000444058 ARHGEF16Q5VV41 709 aa21.81■■□□□ 1.08
ATPAF2-201ENST00000444058 CXCL17Q6UXB2 119 aa21.81■■□□□ 1.08
ATPAF2-201ENST00000444058 DHX32Q7L7V1 743 aaKnown RBP21.81■■□□□ 1.08
ATPAF2-201ENST00000444058 SH3RF1Q7Z6J0 888 aa21.81■■□□□ 1.08
ATPAF2-201ENST00000444058 SLC43A3Q8NBI5 491 aa21.81■■□□□ 1.08
ATPAF2-201ENST00000444058 KCNB2Q92953 911 aa21.81■■□□□ 1.08
ATPAF2-201ENST00000444058 RRP36Q96EU6 259 aaKnown RBP21.81■■□□□ 1.08
ATPAF2-201ENST00000444058 MYL10Q9BUA6 226 aa21.81■■□□□ 1.08
ATPAF2-201ENST00000444058 PXMP2Q9NR77 195 aa21.81■■□□□ 1.08
ATPAF2-201ENST00000444058 EIF3JO75822 258 aaKnown RBP21.8■■□□□ 1.08
ATPAF2-201ENST00000444058 TXNP10599 105 aaKnown RBP21.8■■□□□ 1.08
ATPAF2-201ENST00000444058 CCDC62Q6P9F0 684 aa21.8■■□□□ 1.08
ATPAF2-201ENST00000444058 RASEFQ8IZ41 740 aa21.8■■□□□ 1.08
ATPAF2-201ENST00000444058 TMEM39AQ9NV64 488 aa21.8■■□□□ 1.08
ATPAF2-201ENST00000444058 POLR3EQ9NVU0 708 aa21.8■■□□□ 1.08
ATPAF2-201ENST00000444058 LTBP2Q14767 1821 aa21.79■■□□□ 1.08
ATPAF2-201ENST00000444058 A6NJR5 290 aa21.79■■□□□ 1.08
ATPAF2-201ENST00000444058 GCOM1H8Y6P7 765 aaPredicted RBP21.79■■□□□ 1.08
ATPAF2-201ENST00000444058 EPB41L2O43491 1005 aaKnown RBP21.79■■□□□ 1.08
ATPAF2-201ENST00000444058 NR3C2P08235 984 aa21.79■■□□□ 1.08
ATPAF2-201ENST00000444058 POLR2MP0CAP2 368 aa21.79■■□□□ 1.08
ATPAF2-201ENST00000444058 PTGS1P23219 599 aa21.79■■□□□ 1.08
ATPAF2-201ENST00000444058 FANCBQ8NB91 859 aa21.79■■□□□ 1.08
ATPAF2-201ENST00000444058 BADQ92934 168 aa21.79■■□□□ 1.08
ATPAF2-201ENST00000444058 TBX21Q9UL17 535 aa21.79■■□□□ 1.08
ATPAF2-201ENST00000444058 LAMA3Q16787 3333 aa21.78■■□□□ 1.08
ATPAF2-201ENST00000444058 KPNA6O60684 536 aa21.78■■□□□ 1.08
ATPAF2-201ENST00000444058 REC8O95072 547 aa21.78■■□□□ 1.08
ATPAF2-201ENST00000444058 EIF2AK2P19525 551 aaKnown RBP21.78■■□□□ 1.08
ATPAF2-201ENST00000444058 HSPA4P34932 840 aa21.78■■□□□ 1.08
ATPAF2-201ENST00000444058 ITGA7Q13683 1181 aa21.78■■□□□ 1.08
ATPAF2-201ENST00000444058 GPR153Q6NV75 609 aa21.78■■□□□ 1.08
ATPAF2-201ENST00000444058 SYNE3Q6ZMZ3 975 aa21.78■■□□□ 1.08
ATPAF2-201ENST00000444058 FAM126BQ8IXS8 530 aa21.78■■□□□ 1.08
ATPAF2-201ENST00000444058 OR6J1Q8NGC5 347 aa21.78■■□□□ 1.08
ATPAF2-201ENST00000444058 PDCD2LQ9BRP1 358 aa21.78■■□□□ 1.08
ATPAF2-201ENST00000444058 PPP4R2Q9NY27 417 aa21.78■■□□□ 1.08
ATPAF2-201ENST00000444058 SEC63Q9UGP8 760 aaKnown RBP21.78■■□□□ 1.08
ATPAF2-201ENST00000444058 BAZ2BQ9UIF8 2168 aaKnown RBP21.77■■□□□ 1.08
ATPAF2-201ENST00000444058 TLR3O15455 904 aaKnown RBP21.77■■□□□ 1.08
ATPAF2-201ENST00000444058 RAG1P15918 1043 aa21.77■■□□□ 1.08
ATPAF2-201ENST00000444058 ADCK5Q3MIX3 580 aa21.77■■□□□ 1.08
ATPAF2-201ENST00000444058 VSIG10LQ86VR7 867 aa21.77■■□□□ 1.08
ATPAF2-201ENST00000444058 SRBD1Q8N5C6 995 aaKnown RBP21.77■■□□□ 1.08
ATPAF2-201ENST00000444058 LRRC2Q9BYS8 371 aa21.77■■□□□ 1.08
ATPAF2-201ENST00000444058 ARIH2O95376 493 aa21.76■■□□□ 1.07
ATPAF2-201ENST00000444058 PLEKHA8P1O95397 391 aa21.76■■□□□ 1.07
ATPAF2-201ENST00000444058 CD4P01730 458 aa21.76■■□□□ 1.07
ATPAF2-201ENST00000444058 ITGB8P26012 769 aa21.76■■□□□ 1.07
ATPAF2-201ENST00000444058 HOXA13P31271 388 aaPredicted RBP21.76■■□□□ 1.07
ATPAF2-201ENST00000444058 RCAN1P53805 252 aa21.76■■□□□ 1.07
ATPAF2-201ENST00000444058 PURAQ00577 322 aaKnown RBP21.76■■□□□ 1.07
ATPAF2-201ENST00000444058 KCNV1Q6PIU1 500 aa21.76■■□□□ 1.07
ATPAF2-201ENST00000444058 APOA5Q6Q788 366 aa21.76■■□□□ 1.07
ATPAF2-201ENST00000444058 SEPT14Q6ZU15 432 aa21.76■■□□□ 1.07
ATPAF2-201ENST00000444058 PCDH10Q9P2E7 1040 aa21.76■■□□□ 1.07
ATPAF2-201ENST00000444058 GRIN2DO15399 1336 aa21.76■■□□□ 1.07
ATPAF2-201ENST00000444058 PIK3CDO00329 1044 aa21.75■■□□□ 1.07
ATPAF2-201ENST00000444058 SOX1O00570 391 aaPredicted RBP21.75■■□□□ 1.07
ATPAF2-201ENST00000444058 TIMP1P01033 207 aa21.75■■□□□ 1.07
ATPAF2-201ENST00000444058 RXRAP19793 462 aa21.75■■□□□ 1.07
ATPAF2-201ENST00000444058 PGM5Q15124 567 aa21.75■■□□□ 1.07
ATPAF2-201ENST00000444058 TMTC3Q6ZXV5 915 aa21.75■■□□□ 1.07
ATPAF2-201ENST00000444058 EMID1Q96A84 441 aaPredicted RBP21.75■■□□□ 1.07
ATPAF2-201ENST00000444058 MTG1Q9BT17 334 aaPredicted RBP21.75■■□□□ 1.07
ATPAF2-201ENST00000444058 RBM28Q9NW13 759 aaKnown RBP21.75■■□□□ 1.07
ATPAF2-201ENST00000444058 DDX41Q9UJV9 622 aaKnown RBP21.75■■□□□ 1.07
ATPAF2-201ENST00000444058 GH1P01241 217 aa21.74■■□□□ 1.07
ATPAF2-201ENST00000444058 MICU3Q86XE3 530 aa21.74■■□□□ 1.07
ATPAF2-201ENST00000444058 COPS5Q92905 334 aa21.74■■□□□ 1.07
ATPAF2-201ENST00000444058 FRMPD4Q14CM0 1322 aa21.74■■□□□ 1.07
ATPAF2-201ENST00000444058 STAM2O75886 525 aa21.73■■□□□ 1.07
ATPAF2-201ENST00000444058 CENPBP07199 599 aaPredicted RBP21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms