RNA–Protein interactions for RNA: ENST00000443908.5

SF1-210, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-210ENST00000443908 CAPN2P17655 700 aa15.35■□□□□ 0.05
SF1-210ENST00000443908 GCLCP48506 637 aaPredicted RBP15.35■□□□□ 0.05
SF1-210ENST00000443908 NASPP49321 788 aaPredicted RBP15.35■□□□□ 0.05
SF1-210ENST00000443908 FAM110CQ1W6H9 321 aa15.35■□□□□ 0.05
SF1-210ENST00000443908 NECAB2Q7Z6G3 386 aa15.35■□□□□ 0.05
SF1-210ENST00000443908 TEX13BQ9BXU2 312 aa15.35■□□□□ 0.05
SF1-210ENST00000443908 ASCC2Q9H1I8 757 aaPredicted RBP15.35■□□□□ 0.05
SF1-210ENST00000443908 MAP3K20Q9NYL2 800 aaKnown RBP15.35■□□□□ 0.05
SF1-210ENST00000443908 RTEL1Q9NZ71 1219 aa15.35■□□□□ 0.05
SF1-210ENST00000443908 ADAMTS3O15072 1205 aa15.34■□□□□ 0.05
SF1-210ENST00000443908 FOSP01100 380 aaPredicted RBP15.34■□□□□ 0.05
SF1-210ENST00000443908 HERVK_113P62684 666 aa15.34■□□□□ 0.05
SF1-210ENST00000443908 TMEM132BQ14DG7 1078 aa15.34■□□□□ 0.05
SF1-210ENST00000443908 NONOQ15233 471 aaKnown RBP eCLIP15.34■□□□□ 0.05
SF1-210ENST00000443908 NFKBIBQ15653 356 aa15.34■□□□□ 0.05
SF1-210ENST00000443908 SAMD1Q6SPF0 538 aaPredicted RBP15.34■□□□□ 0.05
SF1-210ENST00000443908 CCAR1Q8IX12 1150 aaKnown RBP15.34■□□□□ 0.05
SF1-210ENST00000443908 AGBL1Q96MI9 1066 aa15.34■□□□□ 0.05
SF1-210ENST00000443908 USP28Q96RU2 1077 aa15.34■□□□□ 0.05
SF1-210ENST00000443908 RAVER2Q9HCJ3 691 aaKnown RBP15.34■□□□□ 0.05
SF1-210ENST00000443908 CNPY2Q9Y2B0 182 aa15.34■□□□□ 0.05
SF1-210ENST00000443908 MEIS2O14770 477 aa15.33■□□□□ 0.04
SF1-210ENST00000443908 BMP15O95972 392 aa15.33■□□□□ 0.04
SF1-210ENST00000443908 NCLP19338 710 aaKnown RBP15.33■□□□□ 0.04
SF1-210ENST00000443908 COPB2P35606 906 aa15.33■□□□□ 0.04
SF1-210ENST00000443908 TOB1P50616 345 aaPredicted RBP15.33■□□□□ 0.04
SF1-210ENST00000443908 ORC2Q13416 577 aaPredicted RBP15.33■□□□□ 0.04
SF1-210ENST00000443908 FOXD4L6Q3SYB3 417 aaPredicted RBP15.33■□□□□ 0.04
SF1-210ENST00000443908 EARS2Q5JPH6 523 aaKnown RBP15.33■□□□□ 0.04
SF1-210ENST00000443908 ANO1Q5XXA6 986 aa15.33■□□□□ 0.04
SF1-210ENST00000443908 FOXD4L3Q6VB84 417 aaPredicted RBP15.33■□□□□ 0.04
SF1-210ENST00000443908 PIK3AP1Q6ZUJ8 805 aa15.33■□□□□ 0.04
SF1-210ENST00000443908 MCF2L2Q86YR7 1114 aa15.33■□□□□ 0.04
SF1-210ENST00000443908 RASGRP4Q8TDF6 673 aa15.33■□□□□ 0.04
SF1-210ENST00000443908 CLEC4DQ8WXI8 215 aa15.33■□□□□ 0.04
SF1-210ENST00000443908 P2RX7Q99572 595 aaKnown RBP15.33■□□□□ 0.04
SF1-210ENST00000443908 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.33■□□□□ 0.045e-7■■■■□ 24.8
SF1-210ENST00000443908 HMX1Q9NP08 348 aaPredicted RBP15.33■□□□□ 0.04
SF1-210ENST00000443908 PAK6Q9NQU5 681 aaPredicted RBP15.33■□□□□ 0.04
SF1-210ENST00000443908 COL11A1P12107 1806 aaPredicted RBP15.32■□□□□ 0.04
SF1-210ENST00000443908 FAM205CA6NFA0 338 aa15.32■□□□□ 0.04
SF1-210ENST00000443908 FIBPO43427 364 aa15.32■□□□□ 0.04
SF1-210ENST00000443908 HMGCRP04035 888 aa15.32■□□□□ 0.04
SF1-210ENST00000443908 HSD17B4P51659 736 aa15.32■□□□□ 0.04
SF1-210ENST00000443908 UBE2SQ16763 222 aa15.32■□□□□ 0.04
SF1-210ENST00000443908 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.32■□□□□ 0.04
SF1-210ENST00000443908 CPXCR1Q8N123 301 aa15.32■□□□□ 0.04
SF1-210ENST00000443908 LEO1Q8WVC0 666 aaPredicted RBP15.32■□□□□ 0.04
SF1-210ENST00000443908 CHAMP1Q96JM3 812 aa15.32■□□□□ 0.04
SF1-210ENST00000443908 TFIP11Q9UBB9 837 aaKnown RBP15.32■□□□□ 0.04
SF1-210ENST00000443908 RCOR1Q9UKL0 485 aa15.32■□□□□ 0.04
SF1-210ENST00000443908 CEP131Q9UPN4 1083 aa15.32■□□□□ 0.04
SF1-210ENST00000443908 RABGAP1Q9Y3P9 1069 aa15.32■□□□□ 0.04
SF1-210ENST00000443908 GCOM1H8Y6P7 765 aaPredicted RBP15.31■□□□□ 0.04
SF1-210ENST00000443908 POLR2MP0CAP2 368 aa15.31■□□□□ 0.04
SF1-210ENST00000443908 ALAS1P13196 640 aa15.31■□□□□ 0.04
SF1-210ENST00000443908 CYP2B6P20813 491 aa15.31■□□□□ 0.04
SF1-210ENST00000443908 STAT3P40763 770 aa15.31■□□□□ 0.04
SF1-210ENST00000443908 TTC38Q5R3I4 469 aa15.31■□□□□ 0.04
SF1-210ENST00000443908 JAKMIP3Q5VZ66 844 aa15.31■□□□□ 0.04
SF1-210ENST00000443908 SNRNP48Q6IEG0 339 aaKnown RBP15.31■□□□□ 0.04
SF1-210ENST00000443908 POTEEQ6S8J3 1075 aa15.31■□□□□ 0.04
SF1-210ENST00000443908 NEK8Q86SG6 692 aa15.31■□□□□ 0.04
SF1-210ENST00000443908 RIOX2Q8IUF8 465 aa15.31■□□□□ 0.04
SF1-210ENST00000443908 C7orf61Q8IZ16 206 aa15.31■□□□□ 0.04
SF1-210ENST00000443908 LINC00301Q8NCQ3 95 aa15.31■□□□□ 0.04
SF1-210ENST00000443908 SLC17A8Q8NDX2 589 aa15.31■□□□□ 0.04
SF1-210ENST00000443908 CHST13Q8NET6 341 aa15.31■□□□□ 0.04
SF1-210ENST00000443908 KCNG4Q8TDN1 519 aa15.31■□□□□ 0.04
SF1-210ENST00000443908 DIS3LQ8TF46 1054 aaKnown RBP15.31■□□□□ 0.04
SF1-210ENST00000443908 SPATA32Q96LK8 384 aa15.31■□□□□ 0.04
SF1-210ENST00000443908 TRERF1Q96PN7 1200 aa15.31■□□□□ 0.04
SF1-210ENST00000443908 NAP1L4Q99733 375 aaKnown RBP15.31■□□□□ 0.04
SF1-210ENST00000443908 CRISPLD2Q9H0B8 497 aa15.31■□□□□ 0.04
SF1-210ENST00000443908 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.31■□□□□ 0.04
SF1-210ENST00000443908 RNF146Q9NTX7 359 aa15.31■□□□□ 0.04
SF1-210ENST00000443908 RPTORQ8N122 1335 aa15.31■□□□□ 0.04
SF1-210ENST00000443908 SPDYE3A6NKU9 549 aa15.3■□□□□ 0.04
SF1-210ENST00000443908 PPP6R2O75170 966 aa15.3■□□□□ 0.04
SF1-210ENST00000443908 CNMDO75829 334 aa15.3■□□□□ 0.04
SF1-210ENST00000443908 TAL1P17542 331 aaPredicted RBP15.3■□□□□ 0.04
SF1-210ENST00000443908 TRIM32Q13049 653 aa15.3■□□□□ 0.04
SF1-210ENST00000443908 SLC39A14Q15043 492 aa15.3■□□□□ 0.04
SF1-210ENST00000443908 PTPAQ15257 358 aa15.3■□□□□ 0.04
SF1-210ENST00000443908 SF3A1Q15459 793 aaKnown RBP15.3■□□□□ 0.04
SF1-210ENST00000443908 USP17L6PQ6QN14 398 aa15.3■□□□□ 0.04
SF1-210ENST00000443908 GPRC5AQ8NFJ5 357 aa15.3■□□□□ 0.04
SF1-210ENST00000443908 TBCKQ8TEA7 893 aa15.3■□□□□ 0.04
SF1-210ENST00000443908 ANO3Q9BYT9 981 aa15.3■□□□□ 0.04
SF1-210ENST00000443908 FTOQ9C0B1 505 aaKnown RBP eCLIP15.3■□□□□ 0.04
SF1-210ENST00000443908 SPATC1LQ9H0A9 340 aa15.3■□□□□ 0.04
SF1-210ENST00000443908 EHMT1Q9H9B1 1298 aa15.3■□□□□ 0.04
SF1-210ENST00000443908 LMBRD1Q9NUN5 540 aa15.3■□□□□ 0.04
SF1-210ENST00000443908 TMEM260Q9NX78 707 aa15.3■□□□□ 0.04
SF1-210ENST00000443908 BTBD7Q9P203 1132 aa15.3■□□□□ 0.04
SF1-210ENST00000443908 FBXO40Q9UH90 709 aa15.3■□□□□ 0.04
SF1-210ENST00000443908 GJD2Q9UKL4 321 aa15.3■□□□□ 0.04
SF1-210ENST00000443908 ZMYND8Q9ULU4 1186 aaPredicted RBP15.3■□□□□ 0.04
SF1-210ENST00000443908 CLIC4Q9Y696 253 aa15.3■□□□□ 0.04
SF1-210ENST00000443908 NFIBO00712 420 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms