RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 hCG_1642624A0A1W2PR95 340 aa17.31■□□□□ 0.36
CSNK1E-210ENST00000442216 RBM47A0AV96 593 aaKnown RBP17.31■□□□□ 0.36
CSNK1E-210ENST00000442216 DNM1LO00429 736 aa17.31■□□□□ 0.36
CSNK1E-210ENST00000442216 MEIS2O14770 477 aa17.31■□□□□ 0.36
CSNK1E-210ENST00000442216 CPLX1O14810 134 aa17.31■□□□□ 0.36
CSNK1E-210ENST00000442216 SCG2P13521 617 aa17.31■□□□□ 0.36
CSNK1E-210ENST00000442216 HOXA13P31271 388 aaPredicted RBP17.31■□□□□ 0.36
CSNK1E-210ENST00000442216 AKAP17AQ02040 695 aaKnown RBP17.31■□□□□ 0.36
CSNK1E-210ENST00000442216 STXBP2Q15833 593 aa17.31■□□□□ 0.36
CSNK1E-210ENST00000442216 WWC2Q6AWC2 1192 aa17.31■□□□□ 0.36
CSNK1E-210ENST00000442216 HEATR3Q7Z4Q2 680 aa17.31■□□□□ 0.36
CSNK1E-210ENST00000442216 SLKQ9H2G2 1235 aaPredicted RBP17.31■□□□□ 0.36
CSNK1E-210ENST00000442216 XPNPEP3Q9NQH7 507 aa17.31■□□□□ 0.36
CSNK1E-210ENST00000442216 Q9Y3F1 56 aa17.31■□□□□ 0.36
CSNK1E-210ENST00000442216 FRMPD4Q14CM0 1322 aa17.3■□□□□ 0.36
CSNK1E-210ENST00000442216 PFKFB2O60825 505 aa17.3■□□□□ 0.36
CSNK1E-210ENST00000442216 NR3C2P08235 984 aa17.3■□□□□ 0.36
CSNK1E-210ENST00000442216 NAPAP54920 295 aa17.3■□□□□ 0.36
CSNK1E-210ENST00000442216 NKX3-2P78367 333 aa17.3■□□□□ 0.36
CSNK1E-210ENST00000442216 TNFAIP2Q03169 654 aa17.3■□□□□ 0.36
CSNK1E-210ENST00000442216 RNF180Q86T96 592 aa17.3■□□□□ 0.36
CSNK1E-210ENST00000442216 FBXO16Q8IX29 292 aaPredicted RBP17.3■□□□□ 0.36
CSNK1E-210ENST00000442216 TRIM22Q8IYM9 498 aa17.3■□□□□ 0.36
CSNK1E-210ENST00000442216 SMARCC2Q8TAQ2 1214 aa17.3■□□□□ 0.36
CSNK1E-210ENST00000442216 CCDC12Q8WUD4 166 aaPredicted RBP17.3■□□□□ 0.36
CSNK1E-210ENST00000442216 GPKOWQ92917 476 aaPredicted RBP eCLIP17.3■□□□□ 0.36
CSNK1E-210ENST00000442216 PAWRQ96IZ0 340 aaKnown RBP17.3■□□□□ 0.36
CSNK1E-210ENST00000442216 KIF2CQ99661 725 aa17.3■□□□□ 0.36
CSNK1E-210ENST00000442216 PDCD2LQ9BRP1 358 aa17.3■□□□□ 0.36
CSNK1E-210ENST00000442216 NCOA5Q9HCD5 579 aaKnown RBP17.3■□□□□ 0.36
CSNK1E-210ENST00000442216 TPCN1Q9ULQ1 816 aa17.3■□□□□ 0.36
CSNK1E-210ENST00000442216 MYH7BA7E2Y1 1941 aa17.29■□□□□ 0.36
CSNK1E-210ENST00000442216 ALPK3Q96L96 1907 aa17.29■□□□□ 0.36
CSNK1E-210ENST00000442216 ESYT2A0FGR8 921 aa17.29■□□□□ 0.36
CSNK1E-210ENST00000442216 STXBP3O00186 592 aa17.29■□□□□ 0.36
CSNK1E-210ENST00000442216 NKRFO15226 690 aaKnown RBP eCLIP17.29■□□□□ 0.367e-9■■■□□ 16.7
CSNK1E-210ENST00000442216 ADAMTS4O75173 837 aa17.29■□□□□ 0.36
CSNK1E-210ENST00000442216 EIF3JO75822 258 aaKnown RBP17.29■□□□□ 0.36
CSNK1E-210ENST00000442216 CDKL5O76039 1030 aa17.29■□□□□ 0.36
CSNK1E-210ENST00000442216 COL6A1P12109 1028 aa17.29■□□□□ 0.36
CSNK1E-210ENST00000442216 EIF2AK2P19525 551 aaKnown RBP17.29■□□□□ 0.36
CSNK1E-210ENST00000442216 CST5P28325 142 aaPredicted RBP17.29■□□□□ 0.36
CSNK1E-210ENST00000442216 ADCYAP1R1P41586 468 aa17.29■□□□□ 0.36
CSNK1E-210ENST00000442216 GJA9P57773 515 aa17.29■□□□□ 0.36
CSNK1E-210ENST00000442216 PGM5Q15124 567 aa17.29■□□□□ 0.36
CSNK1E-210ENST00000442216 LRRC41Q15345 812 aa17.29■□□□□ 0.36
CSNK1E-210ENST00000442216 PKN1Q16512 942 aa17.29■□□□□ 0.36
CSNK1E-210ENST00000442216 DUSP28Q4G0W2 176 aa17.29■□□□□ 0.36
CSNK1E-210ENST00000442216 ANO1Q5XXA6 986 aa17.29■□□□□ 0.36
CSNK1E-210ENST00000442216 EEPD1Q7L9B9 569 aa17.29■□□□□ 0.36
CSNK1E-210ENST00000442216 VSIG10LQ86VR7 867 aa17.29■□□□□ 0.36
CSNK1E-210ENST00000442216 FCHSD1Q86WN1 690 aa17.29■□□□□ 0.36
CSNK1E-210ENST00000442216 SCFD2Q8WU76 684 aa17.29■□□□□ 0.36
CSNK1E-210ENST00000442216 LARP6Q9BRS8 491 aaKnown RBP17.29■□□□□ 0.36
CSNK1E-210ENST00000442216 HTATIP2Q9BUP3 242 aa17.29■□□□□ 0.36
CSNK1E-210ENST00000442216 UPF3AQ9H1J1 476 aaKnown RBP17.29■□□□□ 0.36
CSNK1E-210ENST00000442216 C11orf49Q9H6J7 331 aa17.29■□□□□ 0.36
CSNK1E-210ENST00000442216 SPC25Q9HBM1 224 aa17.29■□□□□ 0.36
CSNK1E-210ENST00000442216 RIC8AQ9NPQ8 531 aa17.29■□□□□ 0.36
CSNK1E-210ENST00000442216 GNEQ9Y223 722 aaKnown RBP17.29■□□□□ 0.36
CSNK1E-210ENST00000442216 SYNRGQ9UMZ2 1314 aa17.28■□□□□ 0.36
CSNK1E-210ENST00000442216 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.28■□□□□ 0.36
CSNK1E-210ENST00000442216 KBTBD13C9JR72 458 aa17.28■□□□□ 0.36
CSNK1E-210ENST00000442216 ADCY6O43306 1168 aa17.28■□□□□ 0.36
CSNK1E-210ENST00000442216 STAM2O75886 525 aa17.28■□□□□ 0.36
CSNK1E-210ENST00000442216 SSRP1Q08945 709 aaKnown RBP17.28■□□□□ 0.36
CSNK1E-210ENST00000442216 SCRN1Q12765 414 aa17.28■□□□□ 0.36
CSNK1E-210ENST00000442216 STK3Q13188 491 aa17.28■□□□□ 0.36
CSNK1E-210ENST00000442216 XRRA1Q6P2D8 792 aa17.28■□□□□ 0.36
CSNK1E-210ENST00000442216 USP17L6PQ6QN14 398 aa17.28■□□□□ 0.36
CSNK1E-210ENST00000442216 FAM177A1Q8N128 213 aaPredicted RBP17.28■□□□□ 0.36
CSNK1E-210ENST00000442216 KLHDC9Q8NEP7 349 aa17.28■□□□□ 0.36
CSNK1E-210ENST00000442216 DIS3LQ8TF46 1054 aaKnown RBP17.28■□□□□ 0.36
CSNK1E-210ENST00000442216 PHKBQ93100 1093 aa17.28■□□□□ 0.36
CSNK1E-210ENST00000442216 TSEN34Q9BSV6 310 aaKnown RBP17.28■□□□□ 0.36
CSNK1E-210ENST00000442216 SLC26A6Q9BXS9 759 aa17.28■□□□□ 0.36
CSNK1E-210ENST00000442216 WDR11Q9BZH6 1224 aa17.28■□□□□ 0.36
CSNK1E-210ENST00000442216 PDGFCQ9NRA1 345 aa17.28■□□□□ 0.36
CSNK1E-210ENST00000442216 DDX49Q9Y6V7 483 aaKnown RBP17.28■□□□□ 0.36
CSNK1E-210ENST00000442216 BRCA2P51587 3418 aa17.28■□□□□ 0.36
CSNK1E-210ENST00000442216 SMCO2A6NFE2 343 aa17.27■□□□□ 0.36
CSNK1E-210ENST00000442216 DEXIO95424 95 aa17.27■□□□□ 0.36
CSNK1E-210ENST00000442216 PGK1P00558 417 aa17.27■□□□□ 0.36
CSNK1E-210ENST00000442216 SMPD1P17405 629 aa17.27■□□□□ 0.36
CSNK1E-210ENST00000442216 CCND2P30279 289 aa17.27■□□□□ 0.36
CSNK1E-210ENST00000442216 TTLL4Q14679 1199 aa17.27■□□□□ 0.36
CSNK1E-210ENST00000442216 GJC2Q5T442 439 aaPredicted RBP17.27■□□□□ 0.36
CSNK1E-210ENST00000442216 TYW1BQ6NUM6 668 aa17.27■□□□□ 0.36
CSNK1E-210ENST00000442216 ZMYND12Q9H0C1 365 aa17.27■□□□□ 0.36
CSNK1E-210ENST00000442216 SH3GLB2Q9NR46 395 aa17.27■□□□□ 0.36
CSNK1E-210ENST00000442216 SPDYE3A6NKU9 549 aa17.26■□□□□ 0.35
CSNK1E-210ENST00000442216 FOSP01100 380 aaPredicted RBP17.26■□□□□ 0.35
CSNK1E-210ENST00000442216 ADCY7P51828 1080 aa17.26■□□□□ 0.35
CSNK1E-210ENST00000442216 RABEP1Q15276 862 aa17.26■□□□□ 0.35
CSNK1E-210ENST00000442216 ME3Q16798 604 aa17.26■□□□□ 0.35
CSNK1E-210ENST00000442216 MCTP2Q6DN12 878 aa17.26■□□□□ 0.35
CSNK1E-210ENST00000442216 KCNV1Q6PIU1 500 aa17.26■□□□□ 0.35
CSNK1E-210ENST00000442216 NOL8Q76FK4 1167 aaKnown RBP17.26■□□□□ 0.35
CSNK1E-210ENST00000442216 TLK2Q86UE8 772 aa17.26■□□□□ 0.35
CSNK1E-210ENST00000442216 PCSK9Q8NBP7 692 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms