RNA–Protein interactions for RNA: ENST00000441738.1

TIMP1-203, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 5

Gene TIMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-203ENST00000441738 TAAR1Q96RJ0 339 aa9.55□□□□□ -0.88
TIMP1-203ENST00000441738 CWC22Q9HCG8 908 aaKnown RBP9.55□□□□□ -0.88
TIMP1-203ENST00000441738 HMX1Q9NP08 348 aaPredicted RBP9.55□□□□□ -0.88
TIMP1-203ENST00000441738 PDGFCQ9NRA1 345 aa9.55□□□□□ -0.88
TIMP1-203ENST00000441738 BIN2Q9UBW5 565 aaPredicted RBP9.55□□□□□ -0.88
TIMP1-203ENST00000441738 TPCN1Q9ULQ1 816 aa9.55□□□□□ -0.88
TIMP1-203ENST00000441738 ZMYND8Q9ULU4 1186 aaPredicted RBP9.55□□□□□ -0.88
TIMP1-203ENST00000441738 PCDHA1Q9Y5I3 950 aa9.55□□□□□ -0.88
TIMP1-203ENST00000441738 TRIP12Q14669 1992 aaPredicted RBP9.55□□□□□ -0.88
TIMP1-203ENST00000441738 SIP14410 1827 aa9.54□□□□□ -0.88
TIMP1-203ENST00000441738 STXBP3O00186 592 aa9.54□□□□□ -0.88
TIMP1-203ENST00000441738 SEPT4O43236 478 aa9.54□□□□□ -0.88
TIMP1-203ENST00000441738 DHX16O60231 1041 aaKnown RBP9.54□□□□□ -0.88
TIMP1-203ENST00000441738 ADAMTS4O75173 837 aa9.54□□□□□ -0.88
TIMP1-203ENST00000441738 CD2BP2O95400 341 aaKnown RBP9.54□□□□□ -0.88
TIMP1-203ENST00000441738 COL6A1P12109 1028 aa9.54□□□□□ -0.88
TIMP1-203ENST00000441738 CALML3P27482 149 aa9.54□□□□□ -0.88
TIMP1-203ENST00000441738 PSMA5P28066 241 aa9.54□□□□□ -0.88
TIMP1-203ENST00000441738 HOXA13P31271 388 aaPredicted RBP9.54□□□□□ -0.88
TIMP1-203ENST00000441738 KIF5BP33176 963 aa9.54□□□□□ -0.88
TIMP1-203ENST00000441738 SCRN1Q12765 414 aa9.54□□□□□ -0.88
TIMP1-203ENST00000441738 GJC2Q5T442 439 aaPredicted RBP9.54□□□□□ -0.88
TIMP1-203ENST00000441738 MFSD14CQ5VZR4 134 aa9.54□□□□□ -0.88
TIMP1-203ENST00000441738 FBXO16Q8IX29 292 aaPredicted RBP9.54□□□□□ -0.88
TIMP1-203ENST00000441738 MSL3Q8N5Y2 521 aaKnown RBP9.54□□□□□ -0.88
TIMP1-203ENST00000441738 PHKBQ93100 1093 aa9.54□□□□□ -0.88
TIMP1-203ENST00000441738 UBE2OQ9C0C9 1292 aaKnown RBP9.54□□□□□ -0.88
TIMP1-203ENST00000441738 DDX20Q9UHI6 824 aaKnown RBP9.54□□□□□ -0.88
TIMP1-203ENST00000441738 CTDP1Q9Y5B0 961 aaPredicted RBP9.54□□□□□ -0.88
TIMP1-203ENST00000441738 CYP46A1Q9Y6A2 500 aa9.54□□□□□ -0.88
TIMP1-203ENST00000441738 LAMA2P24043 3122 aaKnown RBP9.54□□□□□ -0.88
TIMP1-203ENST00000441738 TANC1Q9C0D5 1861 aa9.53□□□□□ -0.88
TIMP1-203ENST00000441738 RBM47A0AV96 593 aaKnown RBP9.53□□□□□ -0.88
TIMP1-203ENST00000441738 PTPDC1A2A3K4 754 aa9.53□□□□□ -0.88
TIMP1-203ENST00000441738 EDIL3O43854 480 aa9.53□□□□□ -0.88
TIMP1-203ENST00000441738 ARIH2O95376 493 aa9.53□□□□□ -0.88
TIMP1-203ENST00000441738 CAPN2P17655 700 aa9.53□□□□□ -0.88
TIMP1-203ENST00000441738 ADCYAP1R1P41586 468 aa9.53□□□□□ -0.88
TIMP1-203ENST00000441738 MAGEA10P43363 369 aaPredicted RBP9.53□□□□□ -0.88
TIMP1-203ENST00000441738 METAP2P50579 478 aaKnown RBP eCLIP9.53□□□□□ -0.886e-10■□□□□ 10.7
TIMP1-203ENST00000441738 CCT2P78371 535 aaKnown RBP9.53□□□□□ -0.88
TIMP1-203ENST00000441738 ACVR2BQ13705 512 aa9.53□□□□□ -0.88
TIMP1-203ENST00000441738 NPY5RQ15761 445 aa9.53□□□□□ -0.88
TIMP1-203ENST00000441738 ME3Q16798 604 aa9.53□□□□□ -0.88
TIMP1-203ENST00000441738 TJAP1Q5JTD0 557 aa9.53□□□□□ -0.88
TIMP1-203ENST00000441738 CCSAPQ6IQ19 270 aaPredicted RBP9.53□□□□□ -0.88
TIMP1-203ENST00000441738 USP17L6PQ6QN14 398 aa9.53□□□□□ -0.88
TIMP1-203ENST00000441738 C7orf61Q8IZ16 206 aa9.53□□□□□ -0.88
TIMP1-203ENST00000441738 ZNF274Q96GC6 653 aaPredicted RBP9.53□□□□□ -0.88
TIMP1-203ENST00000441738 LZTS2Q9BRK4 669 aa9.53□□□□□ -0.88
TIMP1-203ENST00000441738 PDRG1Q9NUG6 133 aa9.53□□□□□ -0.88
TIMP1-203ENST00000441738 RBM28Q9NW13 759 aaKnown RBP9.53□□□□□ -0.88
TIMP1-203ENST00000441738 NRBP1Q9UHY1 535 aa9.53□□□□□ -0.88
TIMP1-203ENST00000441738 GNEQ9Y223 722 aaKnown RBP9.53□□□□□ -0.88
TIMP1-203ENST00000441738 SYNRGQ9UMZ2 1314 aa9.53□□□□□ -0.88
TIMP1-203ENST00000441738 PIK3CDO00329 1044 aa9.52□□□□□ -0.89
TIMP1-203ENST00000441738 CFBP00751 764 aa9.52□□□□□ -0.89
TIMP1-203ENST00000441738 TFRCP02786 760 aaKnown RBP9.52□□□□□ -0.89
TIMP1-203ENST00000441738 IFNAR1P17181 557 aa9.52□□□□□ -0.89
TIMP1-203ENST00000441738 CLK2P49760 499 aaKnown RBP9.52□□□□□ -0.89
TIMP1-203ENST00000441738 GNAQP50148 359 aa9.52□□□□□ -0.89
TIMP1-203ENST00000441738 NKX3-2P78367 333 aa9.52□□□□□ -0.89
TIMP1-203ENST00000441738 UBE2SQ16763 222 aa9.52□□□□□ -0.89
TIMP1-203ENST00000441738 CCDC144BQ3MJ40 725 aa9.52□□□□□ -0.89
TIMP1-203ENST00000441738 ZNF697Q5TEC3 545 aa9.52□□□□□ -0.89
TIMP1-203ENST00000441738 EEPD1Q7L9B9 569 aa9.52□□□□□ -0.89
TIMP1-203ENST00000441738 RRP36Q96EU6 259 aaKnown RBP9.52□□□□□ -0.89
TIMP1-203ENST00000441738 ZFP91Q96JP5 570 aaPredicted RBP9.52□□□□□ -0.89
TIMP1-203ENST00000441738 TBC1D32Q96NH3 1257 aa9.52□□□□□ -0.89
TIMP1-203ENST00000441738 AIFM3Q96NN9 605 aa9.52□□□□□ -0.89
TIMP1-203ENST00000441738 BACH2Q9BYV9 841 aa9.52□□□□□ -0.89
TIMP1-203ENST00000441738 MAF1Q9H063 256 aa9.52□□□□□ -0.89
TIMP1-203ENST00000441738 UPF3AQ9H1J1 476 aaKnown RBP9.52□□□□□ -0.89
TIMP1-203ENST00000441738 ABHD16BQ9H3Z7 469 aa9.52□□□□□ -0.89
TIMP1-203ENST00000441738 PXMP2Q9NR77 195 aa9.52□□□□□ -0.89
TIMP1-203ENST00000441738 SLC5A4Q9NY91 659 aa9.52□□□□□ -0.89
TIMP1-203ENST00000441738 ZHX1Q9UKY1 873 aaPredicted RBP9.52□□□□□ -0.89
TIMP1-203ENST00000441738 PNMA2Q9UL42 364 aa9.52□□□□□ -0.89
TIMP1-203ENST00000441738 MRPL11Q9Y3B7 192 aaKnown RBP9.52□□□□□ -0.89
TIMP1-203ENST00000441738 V9GY48 417 aaPredicted RBP9.52□□□□□ -0.89
TIMP1-203ENST00000441738 MYH15Q9Y2K3 1946 aa9.52□□□□□ -0.89
TIMP1-203ENST00000441738 SCN5AQ14524 2016 aa9.51□□□□□ -0.89
TIMP1-203ENST00000441738 LOC102724159A0A0B4J2E5 919 aa9.51□□□□□ -0.89
TIMP1-203ENST00000441738 PRPF3O43395 683 aaKnown RBP9.51□□□□□ -0.89
TIMP1-203ENST00000441738 PFKFB2O60825 505 aa9.51□□□□□ -0.89
TIMP1-203ENST00000441738 PGK1P00558 417 aa9.51□□□□□ -0.89
TIMP1-203ENST00000441738 FDPSP14324 419 aaKnown RBP9.51□□□□□ -0.89
TIMP1-203ENST00000441738 SMPD1P17405 629 aa9.51□□□□□ -0.89
TIMP1-203ENST00000441738 SYN1P17600 705 aa9.51□□□□□ -0.89
TIMP1-203ENST00000441738 EIF2AK2P19525 551 aaKnown RBP9.51□□□□□ -0.89
TIMP1-203ENST00000441738 MRPS9P82933 396 aaKnown RBP9.51□□□□□ -0.89
TIMP1-203ENST00000441738 STK3Q13188 491 aa9.51□□□□□ -0.89
TIMP1-203ENST00000441738 SEMA3FQ13275 785 aa9.51□□□□□ -0.89
TIMP1-203ENST00000441738 PGM5Q15124 567 aa9.51□□□□□ -0.89
TIMP1-203ENST00000441738 PWP2Q15269 919 aaKnown RBP9.51□□□□□ -0.89
TIMP1-203ENST00000441738 LRRC41Q15345 812 aa9.51□□□□□ -0.89
TIMP1-203ENST00000441738 PFKFB3Q16875 520 aaPredicted RBP9.51□□□□□ -0.89
TIMP1-203ENST00000441738 CCDC62Q6P9F0 684 aa9.51□□□□□ -0.89
TIMP1-203ENST00000441738 NECAB1Q8N987 351 aa9.51□□□□□ -0.89
TIMP1-203ENST00000441738 KLHDC9Q8NEP7 349 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms