RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 IRF2BP1Q8IU81 584 aa13.21□□□□□ -0.29
LTBR-203ENST00000441074 SPATA4Q8NEY3 305 aa13.21□□□□□ -0.29
LTBR-203ENST00000441074 ZKSCAN3Q9BRR0 538 aa13.21□□□□□ -0.29
LTBR-203ENST00000441074 UBAC1Q9BSL1 405 aa13.21□□□□□ -0.29
LTBR-203ENST00000441074 TSGA10Q9BZW7 698 aa13.21□□□□□ -0.29
LTBR-203ENST00000441074 VCPKMTQ9H867 229 aa13.21□□□□□ -0.29
LTBR-203ENST00000441074 CD248Q9HCU0 757 aa13.21□□□□□ -0.29
LTBR-203ENST00000441074 KLC4Q9NSK0 619 aa13.21□□□□□ -0.29
LTBR-203ENST00000441074 ZNHIT6Q9NWK9 470 aaKnown RBP13.21□□□□□ -0.29
LTBR-203ENST00000441074 RMND1Q9NWS8 449 aa13.21□□□□□ -0.29
LTBR-203ENST00000441074 IRS2Q9Y4H2 1338 aa13.21□□□□□ -0.3
LTBR-203ENST00000441074 MYCNP04198 464 aaPredicted RBP13.21□□□□□ -0.3
LTBR-203ENST00000441074 ELF1P32519 619 aa13.21□□□□□ -0.3
LTBR-203ENST00000441074 DIXDC1Q155Q3 683 aa13.21□□□□□ -0.3
LTBR-203ENST00000441074 RBM17Q96I25 401 aaKnown RBP13.21□□□□□ -0.3
LTBR-203ENST00000441074 BLZF1Q9H2G9 400 aa13.21□□□□□ -0.3
LTBR-203ENST00000441074 NHEJ1Q9H9Q4 299 aaPredicted RBP13.21□□□□□ -0.3
LTBR-203ENST00000441074 VPS54Q9P1Q0 977 aa13.21□□□□□ -0.3
LTBR-203ENST00000441074 STIM2Q9P246 746 aa13.21□□□□□ -0.3
LTBR-203ENST00000441074 LAMB2P55268 1798 aa13.2□□□□□ -0.3
LTBR-203ENST00000441074 COL24A1Q17RW2 1714 aa13.2□□□□□ -0.3
LTBR-203ENST00000441074 SRRM3A6NNA2 597 aaPredicted RBP13.2□□□□□ -0.3
LTBR-203ENST00000441074 TMCO5BA8MYB1 307 aa13.2□□□□□ -0.3
LTBR-203ENST00000441074 MINDY4BA8MYZ0 360 aa13.2□□□□□ -0.3
LTBR-203ENST00000441074 C6orf229H3BNL8 230 aa13.2□□□□□ -0.3
LTBR-203ENST00000441074 RASSF9O75901 435 aa13.2□□□□□ -0.3
LTBR-203ENST00000441074 EEF1GP26641 437 aaKnown RBP13.2□□□□□ -0.3
LTBR-203ENST00000441074 KRT2P35908 639 aa13.2□□□□□ -0.3
LTBR-203ENST00000441074 KIF5AQ12840 1032 aa13.2□□□□□ -0.3
LTBR-203ENST00000441074 DRP2Q13474 957 aa13.2□□□□□ -0.3
LTBR-203ENST00000441074 WLSQ5T9L3 541 aa13.2□□□□□ -0.3
LTBR-203ENST00000441074 TRIM58Q8NG06 486 aa13.2□□□□□ -0.3
LTBR-203ENST00000441074 ZNF473Q8WTR7 871 aaKnown RBP13.2□□□□□ -0.3
LTBR-203ENST00000441074 STAMQ92783 540 aa13.2□□□□□ -0.3
LTBR-203ENST00000441074 NSUN4Q96CB9 384 aaKnown RBP13.2□□□□□ -0.3
LTBR-203ENST00000441074 ZIM3Q96PE6 472 aa13.2□□□□□ -0.3
LTBR-203ENST00000441074 HINFPQ9BQA5 517 aa13.2□□□□□ -0.3
LTBR-203ENST00000441074 PPP1R1BQ9UD71 204 aaPredicted RBP13.2□□□□□ -0.3
LTBR-203ENST00000441074 PDS5AQ29RF7 1337 aaKnown RBP13.2□□□□□ -0.3
LTBR-203ENST00000441074 VAV2P52735 878 aa13.19□□□□□ -0.3
LTBR-203ENST00000441074 CCDC40Q4G0X9 1142 aa13.19□□□□□ -0.3
LTBR-203ENST00000441074 PDXDC2PQ6P474 469 aa13.19□□□□□ -0.3
LTBR-203ENST00000441074 RNPC3Q96LT9 517 aaKnown RBP13.19□□□□□ -0.3
LTBR-203ENST00000441074 RIOK1Q9BRS2 568 aaKnown RBP13.19□□□□□ -0.3
LTBR-203ENST00000441074 NUP58Q9BVL2 599 aa13.19□□□□□ -0.3
LTBR-203ENST00000441074 DUSP10Q9Y6W6 482 aa13.19□□□□□ -0.3
LTBR-203ENST00000441074 MYH6P13533 1939 aa13.19□□□□□ -0.3
LTBR-203ENST00000441074 MAGEB6P1A0A0J9YX57 407 aa13.19□□□□□ -0.3
LTBR-203ENST00000441074 MACROD2A1Z1Q3 448 aa13.19□□□□□ -0.3
LTBR-203ENST00000441074 FAM205CA6NFA0 338 aa13.19□□□□□ -0.3
LTBR-203ENST00000441074 TACC1O75410 805 aa13.19□□□□□ -0.3
LTBR-203ENST00000441074 PRDM1O75626 825 aa13.19□□□□□ -0.3
LTBR-203ENST00000441074 DNM2P50570 870 aa13.19□□□□□ -0.3
LTBR-203ENST00000441074 ATP1A2P50993 1020 aa13.19□□□□□ -0.3
LTBR-203ENST00000441074 PTGISQ16647 500 aa13.19□□□□□ -0.3
LTBR-203ENST00000441074 HAUS3Q68CZ6 603 aa13.19□□□□□ -0.3
LTBR-203ENST00000441074 IQCKQ8N0W5 287 aa13.19□□□□□ -0.3
LTBR-203ENST00000441074 CCDC82Q8N4S0 544 aa13.19□□□□□ -0.3
LTBR-203ENST00000441074 SH2D3CQ8N5H7 860 aa13.19□□□□□ -0.3
LTBR-203ENST00000441074 RETREG2Q8NC44 543 aa13.19□□□□□ -0.3
LTBR-203ENST00000441074 C1orf131Q8NDD1 294 aaKnown RBP13.19□□□□□ -0.3
LTBR-203ENST00000441074 ESR2Q92731 530 aa13.19□□□□□ -0.3
LTBR-203ENST00000441074 TTYH3Q9C0H2 523 aa13.19□□□□□ -0.3
LTBR-203ENST00000441074 RBM28Q9NW13 759 aaKnown RBP13.19□□□□□ -0.3
LTBR-203ENST00000441074 ANAPC4Q9UJX5 808 aa13.19□□□□□ -0.3
LTBR-203ENST00000441074 PPP1R37O75864 691 aa13.18□□□□□ -0.3
LTBR-203ENST00000441074 RPN1P04843 607 aaKnown RBP13.18□□□□□ -0.3
LTBR-203ENST00000441074 SRGNP10124 158 aa13.18□□□□□ -0.3
LTBR-203ENST00000441074 TCP1P17987 556 aaKnown RBP13.18□□□□□ -0.3
LTBR-203ENST00000441074 PRCPP42785 496 aa13.18□□□□□ -0.3
LTBR-203ENST00000441074 ZBED6P86452 979 aa13.18□□□□□ -0.3
LTBR-203ENST00000441074 CDK17Q00537 523 aa13.18□□□□□ -0.3
LTBR-203ENST00000441074 SLC7A5Q01650 507 aa13.18□□□□□ -0.3
LTBR-203ENST00000441074 PPARAQ07869 468 aa13.18□□□□□ -0.3
LTBR-203ENST00000441074 GLE1Q53GS7 698 aaKnown RBP13.18□□□□□ -0.3
LTBR-203ENST00000441074 RNF187Q5TA31 235 aaPredicted RBP13.18□□□□□ -0.3
LTBR-203ENST00000441074 CD302Q8IX05 232 aa13.18□□□□□ -0.3
LTBR-203ENST00000441074 NUP133Q8WUM0 1156 aa13.18□□□□□ -0.3
LTBR-203ENST00000441074 PHF20Q9BVI0 1012 aa13.18□□□□□ -0.3
LTBR-203ENST00000441074 THAP9Q9H5L6 903 aa13.18□□□□□ -0.3
LTBR-203ENST00000441074 PRPF3O43395 683 aaKnown RBP13.18□□□□□ -0.3
LTBR-203ENST00000441074 CHRNA5P30532 468 aa13.18□□□□□ -0.3
LTBR-203ENST00000441074 NF2P35240 595 aa13.18□□□□□ -0.3
LTBR-203ENST00000441074 SEC23AQ15436 765 aa13.18□□□□□ -0.3
LTBR-203ENST00000441074 EARS2Q5JPH6 523 aaKnown RBP13.18□□□□□ -0.3
LTBR-203ENST00000441074 EP400NLQ6ZTU2 488 aa13.18□□□□□ -0.3
LTBR-203ENST00000441074 CCDC13Q8IYE1 715 aa13.18□□□□□ -0.3
LTBR-203ENST00000441074 TBC1D16Q8TBP0 767 aa13.18□□□□□ -0.3
LTBR-203ENST00000441074 MIEF2Q96C03 454 aa13.18□□□□□ -0.3
LTBR-203ENST00000441074 CCT8L2Q96SF2 557 aa13.18□□□□□ -0.3
LTBR-203ENST00000441074 MTRQ99707 1265 aa13.18□□□□□ -0.3
LTBR-203ENST00000441074 MXD3Q9BW11 206 aa13.18□□□□□ -0.3
LTBR-203ENST00000441074 VEZTQ9HBM0 779 aa13.18□□□□□ -0.3
LTBR-203ENST00000441074 USO1O60763 962 aaKnown RBP13.17□□□□□ -0.3
LTBR-203ENST00000441074 CALM1P0DP23 149 aa13.17□□□□□ -0.3
LTBR-203ENST00000441074 CALM2P0DP24 149 aa13.17□□□□□ -0.3
LTBR-203ENST00000441074 CALM3P0DP25 149 aa13.17□□□□□ -0.3
LTBR-203ENST00000441074 PCP11498 1178 aaKnown RBP13.17□□□□□ -0.3
LTBR-203ENST00000441074 GUCY1A3Q02108 690 aa13.17□□□□□ -0.3
LTBR-203ENST00000441074 CFAP58Q5T655 872 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms