RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 SLC26A4O43511 780 aa10.31□□□□□ -0.76
HDAC6-209ENST00000440653 ENTPD3O75355 529 aa10.31□□□□□ -0.76
HDAC6-209ENST00000440653 OR52Z1P0C646 297 aa10.31□□□□□ -0.76
HDAC6-209ENST00000440653 MCM7P33993 719 aa10.31□□□□□ -0.76
HDAC6-209ENST00000440653 SHMT1P34896 483 aa10.31□□□□□ -0.76
HDAC6-209ENST00000440653 PPP1R2P41236 205 aa10.31□□□□□ -0.76
HDAC6-209ENST00000440653 ADCY7P51828 1080 aa10.31□□□□□ -0.76
HDAC6-209ENST00000440653 GRIN1Q05586 938 aa10.31□□□□□ -0.76
HDAC6-209ENST00000440653 SPAG1Q07617 926 aa10.31□□□□□ -0.76
HDAC6-209ENST00000440653 ZNF543Q08ER8 600 aa10.31□□□□□ -0.76
HDAC6-209ENST00000440653 DPYDQ12882 1025 aa10.31□□□□□ -0.76
HDAC6-209ENST00000440653 ZNF174Q15697 407 aa10.31□□□□□ -0.76
HDAC6-209ENST00000440653 E2F4Q16254 413 aa10.31□□□□□ -0.76
HDAC6-209ENST00000440653 DACT2Q5SW24 774 aa10.31□□□□□ -0.76
HDAC6-209ENST00000440653 CDC42EP5Q6NZY7 148 aa10.31□□□□□ -0.76
HDAC6-209ENST00000440653 DTHD1Q6ZMT9 781 aa10.31□□□□□ -0.76
HDAC6-209ENST00000440653 NEK8Q86SG6 692 aa10.31□□□□□ -0.76
HDAC6-209ENST00000440653 LRRC8AQ8IWT6 810 aa10.31□□□□□ -0.76
HDAC6-209ENST00000440653 DIS3LQ8TF46 1054 aaKnown RBP10.31□□□□□ -0.76
HDAC6-209ENST00000440653 DCAF4Q8WV16 495 aa10.31□□□□□ -0.76
HDAC6-209ENST00000440653 BRI3BPQ8WY22 251 aa10.31□□□□□ -0.76
HDAC6-209ENST00000440653 ERCC4Q92889 916 aaPredicted RBP10.31□□□□□ -0.76
HDAC6-209ENST00000440653 PAWRQ96IZ0 340 aaKnown RBP10.31□□□□□ -0.76
HDAC6-209ENST00000440653 MS4A4AQ96JQ5 239 aa10.31□□□□□ -0.76
HDAC6-209ENST00000440653 CTAGE1Q96RT6 745 aa10.31□□□□□ -0.76
HDAC6-209ENST00000440653 RAB34Q9BZG1 259 aa10.31□□□□□ -0.76
HDAC6-209ENST00000440653 XPO4Q9C0E2 1151 aaKnown RBP10.31□□□□□ -0.76
HDAC6-209ENST00000440653 CCSER1Q9C0I3 900 aa10.31□□□□□ -0.76
HDAC6-209ENST00000440653 DDX4Q9NQI0 724 aaKnown RBP10.31□□□□□ -0.76
HDAC6-209ENST00000440653 DISC1Q9NRI5 854 aa10.31□□□□□ -0.76
HDAC6-209ENST00000440653 IFNKQ9P0W0 207 aa10.31□□□□□ -0.76
HDAC6-209ENST00000440653 PCDHA6Q9UN73 950 aa10.31□□□□□ -0.76
HDAC6-209ENST00000440653 PCDHA8Q9Y5H6 950 aa10.31□□□□□ -0.76
HDAC6-209ENST00000440653 CACNA1AO00555 2505 aa10.3□□□□□ -0.76
HDAC6-209ENST00000440653 SERPINC1P01008 464 aa10.3□□□□□ -0.76
HDAC6-209ENST00000440653 TUBB4AP04350 444 aa10.3□□□□□ -0.76
HDAC6-209ENST00000440653 PRR29P0C7W0 189 aa10.3□□□□□ -0.76
HDAC6-209ENST00000440653 AKR1B1P15121 316 aa10.3□□□□□ -0.76
HDAC6-209ENST00000440653 STAT6P42226 847 aa10.3□□□□□ -0.76
HDAC6-209ENST00000440653 TJAP1Q5JTD0 557 aa10.3□□□□□ -0.76
HDAC6-209ENST00000440653 APOBEC3HQ6NTF7 200 aaKnown RBP10.3□□□□□ -0.76
HDAC6-209ENST00000440653 PDXDC2PQ6P474 469 aa10.3□□□□□ -0.76
HDAC6-209ENST00000440653 ALYREFQ86V81 257 aaKnown RBP10.3□□□□□ -0.76
HDAC6-209ENST00000440653 FCHSD1Q86WN1 690 aa10.3□□□□□ -0.76
HDAC6-209ENST00000440653 PDILTQ8N807 584 aa10.3□□□□□ -0.76
HDAC6-209ENST00000440653 MYLIPQ8WY64 445 aa10.3□□□□□ -0.76
HDAC6-209ENST00000440653 CCDC47Q96A33 483 aaKnown RBP10.3□□□□□ -0.76
HDAC6-209ENST00000440653 PAGE5Q96GU1 130 aa10.3□□□□□ -0.76
HDAC6-209ENST00000440653 TMOD2Q9NZR1 351 aa10.3□□□□□ -0.76
HDAC6-209ENST00000440653 NYAP2Q9P242 653 aa10.3□□□□□ -0.76
HDAC6-209ENST00000440653 PI4KBQ9UBF8 816 aa10.3□□□□□ -0.76
HDAC6-209ENST00000440653 BIN2Q9UBW5 565 aaPredicted RBP10.3□□□□□ -0.76
HDAC6-209ENST00000440653 PYCARDQ9ULZ3 195 aa10.3□□□□□ -0.76
HDAC6-209ENST00000440653 ATAD5Q96QE3 1844 aa10.3□□□□□ -0.76
HDAC6-209ENST00000440653 MYH7BA7E2Y1 1941 aa10.29□□□□□ -0.76
HDAC6-209ENST00000440653 LOXHD1Q8IVV2 1947 aa10.29□□□□□ -0.76
HDAC6-209ENST00000440653 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.29□□□□□ -0.76
HDAC6-209ENST00000440653 SMCO2A6NFE2 343 aa10.29□□□□□ -0.76
HDAC6-209ENST00000440653 F8W031 263 aaPredicted RBP10.29□□□□□ -0.76
HDAC6-209ENST00000440653 TFRCP02786 760 aaKnown RBP10.29□□□□□ -0.76
HDAC6-209ENST00000440653 GCFC2P16383 781 aaKnown RBP10.29□□□□□ -0.76
HDAC6-209ENST00000440653 ZNF18P17022 549 aa10.29□□□□□ -0.76
HDAC6-209ENST00000440653 UBASH3AP57075 661 aa10.29□□□□□ -0.76
HDAC6-209ENST00000440653 TRAF1Q13077 416 aa10.29□□□□□ -0.76
HDAC6-209ENST00000440653 KCNB1Q14721 858 aa10.29□□□□□ -0.76
HDAC6-209ENST00000440653 KIF22Q14807 665 aa10.29□□□□□ -0.76
HDAC6-209ENST00000440653 TMEM266Q2M3C6 531 aa10.29□□□□□ -0.76
HDAC6-209ENST00000440653 SLC35G1Q2M3R5 365 aa10.29□□□□□ -0.76
HDAC6-209ENST00000440653 CCDC144BQ3MJ40 725 aa10.29□□□□□ -0.76
HDAC6-209ENST00000440653 CFAP100Q494V2 611 aa10.29□□□□□ -0.76
HDAC6-209ENST00000440653 SPECC1Q5M775 1068 aa10.29□□□□□ -0.76
HDAC6-209ENST00000440653 TYW1BQ6NUM6 668 aa10.29□□□□□ -0.76
HDAC6-209ENST00000440653 TMEM179Q6ZVK1 233 aa10.29□□□□□ -0.76
HDAC6-209ENST00000440653 TMC6Q7Z403 805 aa10.29□□□□□ -0.76
HDAC6-209ENST00000440653 VSTM4Q8IW00 320 aa10.29□□□□□ -0.76
HDAC6-209ENST00000440653 C4orf32Q8N8J7 132 aa10.29□□□□□ -0.76
HDAC6-209ENST00000440653 ANKRD20A12PQ8NF67 263 aa10.29□□□□□ -0.76
HDAC6-209ENST00000440653 RASSF8Q8NHQ8 419 aa10.29□□□□□ -0.76
HDAC6-209ENST00000440653 RAET1EQ8TD07 263 aa10.29□□□□□ -0.76
HDAC6-209ENST00000440653 CACTINQ8WUQ7 758 aaKnown RBP10.29□□□□□ -0.76
HDAC6-209ENST00000440653 CNKSR2Q8WXI2 1034 aa10.29□□□□□ -0.76
HDAC6-209ENST00000440653 EPSTI1Q96J88 318 aa10.29□□□□□ -0.76
HDAC6-209ENST00000440653 ZNF830Q96NB3 372 aaPredicted RBP10.29□□□□□ -0.76
HDAC6-209ENST00000440653 HSD3B7Q9H2F3 369 aa10.29□□□□□ -0.76
HDAC6-209ENST00000440653 KANSL2Q9H9L4 492 aa10.29□□□□□ -0.76
HDAC6-209ENST00000440653 SRRDQ9UH36 339 aa10.29□□□□□ -0.76
HDAC6-209ENST00000440653 NFE2L3Q9Y4A8 694 aa10.29□□□□□ -0.76
HDAC6-209ENST00000440653 A0A087WWV3 80 aa10.28□□□□□ -0.76
HDAC6-209ENST00000440653 A0A087X0B3 334 aa10.28□□□□□ -0.76
HDAC6-209ENST00000440653 PNMA6FA0A0J9YX94 578 aa10.28□□□□□ -0.76
HDAC6-209ENST00000440653 USP17L5A8MUK1 530 aa10.28□□□□□ -0.76
HDAC6-209ENST00000440653 WNT7AO00755 349 aa10.28□□□□□ -0.76
HDAC6-209ENST00000440653 DYNC1I1O14576 645 aa10.28□□□□□ -0.76
HDAC6-209ENST00000440653 OSBPP22059 807 aa10.28□□□□□ -0.76
HDAC6-209ENST00000440653 UBA7P41226 1012 aa10.28□□□□□ -0.76
HDAC6-209ENST00000440653 MMP14P50281 582 aa10.28□□□□□ -0.76
HDAC6-209ENST00000440653 PRMT2P55345 433 aa10.28□□□□□ -0.76
HDAC6-209ENST00000440653 CCZ1BP86790 482 aa10.28□□□□□ -0.76
HDAC6-209ENST00000440653 CCZ1P86791 482 aaPredicted RBP10.28□□□□□ -0.76
HDAC6-209ENST00000440653 STIM1Q13586 685 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms