RNA–Protein interactions for RNA: ENST00000440271.5

TRIM39-210, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-210ENST00000440271 HLA-CQ95604 372 aa24.31■■□□□ 1.48
TRIM39-210ENST00000440271 GPCPD1Q9NPB8 672 aa24.31■■□□□ 1.48
TRIM39-210ENST00000440271 ORC4O43929 436 aa24.3■■□□□ 1.48
TRIM39-210ENST00000440271 GRB10Q13322 594 aa24.3■■□□□ 1.48
TRIM39-210ENST00000440271 SCFD2Q8WU76 684 aa24.3■■□□□ 1.48
TRIM39-210ENST00000440271 MPHOSPH6Q99547 160 aaKnown RBP24.3■■□□□ 1.48
TRIM39-210ENST00000440271 LRFN3Q9BTN0 628 aa24.3■■□□□ 1.48
TRIM39-210ENST00000440271 SCN10AQ9Y5Y9 1956 aa24.3■■□□□ 1.48
TRIM39-210ENST00000440271 FRMPD2Q68DX3 1309 aaPredicted RBP24.3■■□□□ 1.48
TRIM39-210ENST00000440271 FGRP09769 529 aa24.29■■□□□ 1.48
TRIM39-210ENST00000440271 TXNP10599 105 aaKnown RBP24.29■■□□□ 1.48
TRIM39-210ENST00000440271 TOP1P11387 765 aaKnown RBP24.29■■□□□ 1.48
TRIM39-210ENST00000440271 EDNRBP24530 442 aa24.29■■□□□ 1.48
TRIM39-210ENST00000440271 OTUD7AQ8TE49 926 aaPredicted RBP24.29■■□□□ 1.48
TRIM39-210ENST00000440271 TMEM47Q9BQJ4 181 aa24.29■■□□□ 1.48
TRIM39-210ENST00000440271 NOD1Q9Y239 953 aa24.29■■□□□ 1.48
TRIM39-210ENST00000440271 BAIAP3O94812 1187 aa24.28■■□□□ 1.48
TRIM39-210ENST00000440271 RPS6P62753 249 aaKnown RBP24.28■■□□□ 1.48
TRIM39-210ENST00000440271 VPS53Q5VIR6 699 aa24.28■■□□□ 1.48
TRIM39-210ENST00000440271 DNERQ8NFT8 737 aa24.28■■□□□ 1.48
TRIM39-210ENST00000440271 PNMA2Q9UL42 364 aa24.28■■□□□ 1.48
TRIM39-210ENST00000440271 LPXNO60711 386 aa24.27■■□□□ 1.48
TRIM39-210ENST00000440271 CHMP4BP1P59074 171 aa24.27■■□□□ 1.48
TRIM39-210ENST00000440271 SPRED2Q7Z698 418 aa24.27■■□□□ 1.48
TRIM39-210ENST00000440271 TOMM22Q9NS69 142 aa24.27■■□□□ 1.48
TRIM39-210ENST00000440271 ARIH1Q9Y4X5 557 aaPredicted RBP24.27■■□□□ 1.48
TRIM39-210ENST00000440271 HOXD11P31277 338 aaPredicted RBP24.26■■□□□ 1.47
TRIM39-210ENST00000440271 KCNJ6P48051 423 aa24.26■■□□□ 1.47
TRIM39-210ENST00000440271 PTGISQ16647 500 aa24.26■■□□□ 1.47
TRIM39-210ENST00000440271 TET1Q8NFU7 2136 aa24.25■■□□□ 1.47
TRIM39-210ENST00000440271 B4DLN1 442 aa24.25■■□□□ 1.47
TRIM39-210ENST00000440271 ARIH2O95376 493 aa24.25■■□□□ 1.47
TRIM39-210ENST00000440271 PDHBP11177 359 aa24.25■■□□□ 1.47
TRIM39-210ENST00000440271 MRPL12P52815 198 aaKnown RBP24.25■■□□□ 1.47
TRIM39-210ENST00000440271 GPNMBQ14956 572 aa24.25■■□□□ 1.47
TRIM39-210ENST00000440271 RRP12Q5JTH9 1297 aaKnown RBP24.25■■□□□ 1.47
TRIM39-210ENST00000440271 TMEM31Q5JXX7 168 aa24.25■■□□□ 1.47
TRIM39-210ENST00000440271 TCP11L1Q9NUJ3 509 aa24.25■■□□□ 1.47
TRIM39-210ENST00000440271 HCN4Q9Y3Q4 1203 aa24.25■■□□□ 1.47
TRIM39-210ENST00000440271 LCHNA4D1U4 455 aa24.24■■□□□ 1.47
TRIM39-210ENST00000440271 WDR5P61964 334 aaKnown RBP24.24■■□□□ 1.47
TRIM39-210ENST00000440271 ALX1Q15699 326 aa24.24■■□□□ 1.47
TRIM39-210ENST00000440271 CCDC155Q8N6L0 562 aa24.24■■□□□ 1.47
TRIM39-210ENST00000440271 CAGE1Q8TC20 777 aa24.24■■□□□ 1.47
TRIM39-210ENST00000440271 AFAP1L1Q8TED9 768 aa24.24■■□□□ 1.47
TRIM39-210ENST00000440271 CTAGE1Q96RT6 745 aa24.24■■□□□ 1.47
TRIM39-210ENST00000440271 MX1P20591 662 aa24.23■■□□□ 1.47
TRIM39-210ENST00000440271 ZNF543Q08ER8 600 aa24.23■■□□□ 1.47
TRIM39-210ENST00000440271 TMCO2Q7Z6W1 182 aaPredicted RBP24.23■■□□□ 1.47
TRIM39-210ENST00000440271 AFG1LQ8WV93 481 aa24.23■■□□□ 1.47
TRIM39-210ENST00000440271 KHSRPQ92945 711 aaKnown RBP eCLIP24.23■■□□□ 1.47
TRIM39-210ENST00000440271 ZBED2Q9BTP6 218 aa24.23■■□□□ 1.47
TRIM39-210ENST00000440271 LMCD1Q9NZU5 365 aa24.23■■□□□ 1.47
TRIM39-210ENST00000440271 WDR19Q8NEZ3 1342 aa24.23■■□□□ 1.47
TRIM39-210ENST00000440271 TANC1Q9C0D5 1861 aa24.23■■□□□ 1.47
TRIM39-210ENST00000440271 SELPP16109 830 aa24.22■■□□□ 1.47
TRIM39-210ENST00000440271 GDF6Q6KF10 455 aaPredicted RBP24.22■■□□□ 1.47
TRIM39-210ENST00000440271 CCDC62Q6P9F0 684 aa24.22■■□□□ 1.47
TRIM39-210ENST00000440271 SESTD1Q86VW0 696 aa24.22■■□□□ 1.47
TRIM39-210ENST00000440271 FGAP02671 866 aa24.21■■□□□ 1.47
TRIM39-210ENST00000440271 RGS22Q8NE09 1264 aa24.21■■□□□ 1.47
TRIM39-210ENST00000440271 TTC14Q96N46 770 aa24.21■■□□□ 1.47
TRIM39-210ENST00000440271 TRIP12Q14669 1992 aaPredicted RBP24.2■■□□□ 1.46
TRIM39-210ENST00000440271 GPR37L1O60883 481 aa24.2■■□□□ 1.46
TRIM39-210ENST00000440271 MMP3P08254 477 aa24.2■■□□□ 1.46
TRIM39-210ENST00000440271 SNHG28P0DPA3 235 aa24.2■■□□□ 1.46
TRIM39-210ENST00000440271 DEFB103AP81534 67 aa24.2■■□□□ 1.46
TRIM39-210ENST00000440271 CNKSR3Q6P9H4 555 aa24.2■■□□□ 1.46
TRIM39-210ENST00000440271 LRRC8DQ7L1W4 858 aa24.2■■□□□ 1.46
TRIM39-210ENST00000440271 GDPD5Q8WTR4 605 aa24.2■■□□□ 1.46
TRIM39-210ENST00000440271 DHX38Q92620 1227 aaKnown RBP24.2■■□□□ 1.46
TRIM39-210ENST00000440271 KAT2BQ92831 832 aa24.2■■□□□ 1.46
TRIM39-210ENST00000440271 C11orf16Q9NQ32 467 aa24.2■■□□□ 1.46
TRIM39-210ENST00000440271 HELLSQ9NRZ9 838 aa24.2■■□□□ 1.46
TRIM39-210ENST00000440271 PARNO95453 639 aaKnown RBP24.19■■□□□ 1.46
TRIM39-210ENST00000440271 GH1P01241 217 aa24.19■■□□□ 1.46
TRIM39-210ENST00000440271 LY6KQ17RY6 165 aa24.19■■□□□ 1.46
TRIM39-210ENST00000440271 USH1GQ495M9 461 aa24.19■■□□□ 1.46
TRIM39-210ENST00000440271 SEPT14Q6ZU15 432 aa24.19■■□□□ 1.46
TRIM39-210ENST00000440271 SUGCTQ9HAC7 445 aa24.19■■□□□ 1.46
TRIM39-210ENST00000440271 PCDHB15Q9Y5E8 787 aa24.19■■□□□ 1.46
TRIM39-210ENST00000440271 PTPRSQ13332 1948 aa24.18■■□□□ 1.46
TRIM39-210ENST00000440271 NBNO60934 754 aa24.18■■□□□ 1.46
TRIM39-210ENST00000440271 CXCL10P02778 98 aa24.18■■□□□ 1.46
TRIM39-210ENST00000440271 CASTP20810 708 aaKnown RBP24.18■■□□□ 1.46
TRIM39-210ENST00000440271 ARHGAP1Q07960 439 aa24.18■■□□□ 1.46
TRIM39-210ENST00000440271 RBL2Q08999 1139 aa24.18■■□□□ 1.46
TRIM39-210ENST00000440271 TCTN1Q2MV58 587 aa24.18■■□□□ 1.46
TRIM39-210ENST00000440271 TBC1D5Q92609 795 aa24.18■■□□□ 1.46
TRIM39-210ENST00000440271 EVI5LQ96CN4 794 aa24.18■■□□□ 1.46
TRIM39-210ENST00000440271 RAD9AQ99638 391 aa24.18■■□□□ 1.46
TRIM39-210ENST00000440271 CD320Q9NPF0 282 aa24.18■■□□□ 1.46
TRIM39-210ENST00000440271 MTUS1Q9ULD2 1270 aa24.18■■□□□ 1.46
TRIM39-210ENST00000440271 SALL3Q9BXA9 1300 aa24.17■■□□□ 1.46
TRIM39-210ENST00000440271 ABHD14A-ACY1A0A1B0GW23 586 aa24.17■■□□□ 1.46
TRIM39-210ENST00000440271 PI4K2BG5E9Z4 385 aa24.17■■□□□ 1.46
TRIM39-210ENST00000440271 GJB5O95377 273 aa24.17■■□□□ 1.46
TRIM39-210ENST00000440271 CKBP12277 381 aa24.17■■□□□ 1.46
TRIM39-210ENST00000440271 ERVK-21P61565 698 aa24.17■■□□□ 1.46
TRIM39-210ENST00000440271 DIEXFQ68CQ4 756 aaKnown RBP24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms