RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 NPHS1O60500 1241 aa4.81□□□□□ -1.64
HMGB3P11-201ENST00000440127 SSBP05455 408 aaKnown RBP eCLIP4.81□□□□□ -1.64
HMGB3P11-201ENST00000440127 DBHP09172 617 aa4.81□□□□□ -1.64
HMGB3P11-201ENST00000440127 IFNGR1P15260 489 aa4.81□□□□□ -1.64
HMGB3P11-201ENST00000440127 CDR1P51861 262 aa4.81□□□□□ -1.64
HMGB3P11-201ENST00000440127 CTSWP56202 376 aa4.81□□□□□ -1.64
HMGB3P11-201ENST00000440127 CAP1Q01518 475 aa4.81□□□□□ -1.64
HMGB3P11-201ENST00000440127 MVKQ03426 396 aa4.81□□□□□ -1.64
HMGB3P11-201ENST00000440127 SLC9A5Q14940 896 aa4.81□□□□□ -1.64
HMGB3P11-201ENST00000440127 ARHGEF39Q8N4T4 335 aa4.81□□□□□ -1.64
HMGB3P11-201ENST00000440127 LZTR1Q8N653 840 aa4.81□□□□□ -1.64
HMGB3P11-201ENST00000440127 NETO2Q8NC67 525 aa4.81□□□□□ -1.64
HMGB3P11-201ENST00000440127 SHDQ96IW2 340 aa4.81□□□□□ -1.64
HMGB3P11-201ENST00000440127 KRTAP4-5Q9BYR2 181 aa4.81□□□□□ -1.64
HMGB3P11-201ENST00000440127 PCDH18Q9HCL0 1135 aa4.81□□□□□ -1.64
HMGB3P11-201ENST00000440127 C2orf71A6NGG8 1288 aa4.8□□□□□ -1.64
HMGB3P11-201ENST00000440127 BUB1BO60566 1050 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P11-201ENST00000440127 ZBTB7AO95365 584 aa4.8□□□□□ -1.64
HMGB3P11-201ENST00000440127 EFEMP2O95967 443 aa4.8□□□□□ -1.64
HMGB3P11-201ENST00000440127 BMP7P18075 431 aa4.8□□□□□ -1.64
HMGB3P11-201ENST00000440127 SDHBP21912 280 aa4.8□□□□□ -1.64
HMGB3P11-201ENST00000440127 EPHB3P54753 998 aa4.8□□□□□ -1.64
HMGB3P11-201ENST00000440127 SSPNQ14714 243 aa4.8□□□□□ -1.64
HMGB3P11-201ENST00000440127 KIAA1211LQ6NV74 962 aa4.8□□□□□ -1.64
HMGB3P11-201ENST00000440127 TMEM52Q8NDY8 209 aa4.8□□□□□ -1.64
HMGB3P11-201ENST00000440127 ANAPC16Q96DE5 110 aa4.8□□□□□ -1.64
HMGB3P11-201ENST00000440127 AKT3Q9Y243 479 aa4.8□□□□□ -1.64
HMGB3P11-201ENST00000440127 ERCC6Q03468 1493 aa4.8□□□□□ -1.64
HMGB3P11-201ENST00000440127 FGD6Q6ZV73 1430 aa4.8□□□□□ -1.64
HMGB3P11-201ENST00000440127 ADAMTS12P58397 1594 aa4.79□□□□□ -1.64
HMGB3P11-201ENST00000440127 IQGAP2Q13576 1575 aa4.79□□□□□ -1.64
HMGB3P11-201ENST00000440127 THOC2Q8NI27 1593 aaKnown RBP4.79□□□□□ -1.64
HMGB3P11-201ENST00000440127 KIAA0586Q9BVV6 1533 aa4.79□□□□□ -1.64
HMGB3P11-201ENST00000440127 ZNF608Q9ULD9 1512 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P11-201ENST00000440127 F8W031 263 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P11-201ENST00000440127 CENPBP07199 599 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P11-201ENST00000440127 NCAM1P13591 858 aa4.79□□□□□ -1.64
HMGB3P11-201ENST00000440127 ERCC5P28715 1186 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P11-201ENST00000440127 ZNF200P98182 395 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P11-201ENST00000440127 NAALADL2Q58DX5 795 aa4.79□□□□□ -1.64
HMGB3P11-201ENST00000440127 IQCEQ6IPM2 695 aa4.79□□□□□ -1.64
HMGB3P11-201ENST00000440127 FAM129CQ86XR2 697 aa4.79□□□□□ -1.64
HMGB3P11-201ENST00000440127 DCP2Q8IU60 420 aaKnown RBP4.79□□□□□ -1.64
HMGB3P11-201ENST00000440127 BVESQ8NE79 360 aa4.79□□□□□ -1.64
HMGB3P11-201ENST00000440127 USP33Q8TEY7 942 aa4.79□□□□□ -1.64
HMGB3P11-201ENST00000440127 ALG3Q92685 438 aa4.79□□□□□ -1.64
HMGB3P11-201ENST00000440127 DACT3Q96B18 629 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P11-201ENST00000440127 TSPAN17Q96FV3 270 aa4.79□□□□□ -1.64
HMGB3P11-201ENST00000440127 FGD4Q96M96 766 aa4.79□□□□□ -1.64
HMGB3P11-201ENST00000440127 DRC1Q96MC2 740 aa4.79□□□□□ -1.64
HMGB3P11-201ENST00000440127 PWWP2AQ96N64 755 aa4.79□□□□□ -1.64
HMGB3P11-201ENST00000440127 AP5M1Q9H0R1 490 aa4.79□□□□□ -1.64
HMGB3P11-201ENST00000440127 LUC7LQ9NQ29 371 aaKnown RBP4.79□□□□□ -1.64
HMGB3P11-201ENST00000440127 ACTR10Q9NZ32 417 aa4.79□□□□□ -1.64
HMGB3P11-201ENST00000440127 R3HCC1Q9Y3T6 440 aaKnown RBP4.79□□□□□ -1.64
HMGB3P11-201ENST00000440127 PCDHA5Q9Y5H7 936 aa4.79□□□□□ -1.64
HMGB3P11-201ENST00000440127 NCOA2Q15596 1464 aa4.79□□□□□ -1.64
HMGB3P11-201ENST00000440127 CCDC18Q5T9S5 1454 aa4.79□□□□□ -1.64
HMGB3P11-201ENST00000440127 PBRM1Q86U86 1689 aa4.79□□□□□ -1.64
HMGB3P11-201ENST00000440127 EHBP1L1Q8N3D4 1523 aa4.78□□□□□ -1.64
HMGB3P11-201ENST00000440127 UGGT2Q9NYU1 1516 aa4.78□□□□□ -1.64
HMGB3P11-201ENST00000440127 AGRPO00253 132 aa4.78□□□□□ -1.64
HMGB3P11-201ENST00000440127 MYO1BO43795 1136 aa4.78□□□□□ -1.64
HMGB3P11-201ENST00000440127 DPY19L1Q2PZI1 675 aa4.78□□□□□ -1.64
HMGB3P11-201ENST00000440127 C9orf131Q5VYM1 1079 aa4.78□□□□□ -1.64
HMGB3P11-201ENST00000440127 IGDCC3Q8IVU1 814 aa4.78□□□□□ -1.64
HMGB3P11-201ENST00000440127 LINC01356Q8N9X3 169 aa4.78□□□□□ -1.64
HMGB3P11-201ENST00000440127 KLHL6Q8WZ60 621 aa4.78□□□□□ -1.64
HMGB3P11-201ENST00000440127 PPP1R14AQ96A00 147 aa4.78□□□□□ -1.64
HMGB3P11-201ENST00000440127 ACBD3Q9H3P7 528 aa4.78□□□□□ -1.64
HMGB3P11-201ENST00000440127 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.78□□□□□ -1.64
HMGB3P11-201ENST00000440127 PCDHB10Q9UN67 800 aa4.78□□□□□ -1.64
HMGB3P11-201ENST00000440127 MYOM3Q5VTT5 1437 aa4.78□□□□□ -1.64
HMGB3P11-201ENST00000440127 IRS2Q9Y4H2 1338 aa4.77□□□□□ -1.65
HMGB3P11-201ENST00000440127 HECW1Q76N89 1606 aa4.77□□□□□ -1.65
HMGB3P11-201ENST00000440127 B8ZZF3 427 aa4.77□□□□□ -1.65
HMGB3P11-201ENST00000440127 PRRG2O14669 202 aa4.77□□□□□ -1.65
HMGB3P11-201ENST00000440127 KCNH1O95259 989 aa4.77□□□□□ -1.65
HMGB3P11-201ENST00000440127 MSL3P1P0C860 447 aa4.77□□□□□ -1.65
HMGB3P11-201ENST00000440127 ATF4P18848 351 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P11-201ENST00000440127 TACR1P25103 407 aa4.77□□□□□ -1.65
HMGB3P11-201ENST00000440127 GTF2A2P52657 109 aa4.77□□□□□ -1.65
HMGB3P11-201ENST00000440127 NFIXQ14938 502 aa4.77□□□□□ -1.65
HMGB3P11-201ENST00000440127 KIR3DS1Q14943 382 aa4.77□□□□□ -1.65
HMGB3P11-201ENST00000440127 FXNQ16595 210 aa4.77□□□□□ -1.65
HMGB3P11-201ENST00000440127 WWC2Q6AWC2 1192 aa4.77□□□□□ -1.65
HMGB3P11-201ENST00000440127 MARCH10Q8NA82 808 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P11-201ENST00000440127 CCDC140Q96MF4 163 aa4.77□□□□□ -1.65
HMGB3P11-201ENST00000440127 KCNC2Q96PR1 638 aa4.77□□□□□ -1.65
HMGB3P11-201ENST00000440127 EPN3Q9H201 632 aa4.77□□□□□ -1.65
HMGB3P11-201ENST00000440127 RTEL1Q9NZ71 1219 aa4.77□□□□□ -1.65
HMGB3P11-201ENST00000440127 LRP2BPQ9P2M1 347 aa4.77□□□□□ -1.65
HMGB3P11-201ENST00000440127 CDK11AQ9UQ88 783 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P11-201ENST00000440127 EMC9Q9Y3B6 208 aa4.77□□□□□ -1.65
HMGB3P11-201ENST00000440127 PMF1-BGLAPU3KQ54 211 aa4.77□□□□□ -1.65
HMGB3P11-201ENST00000440127 EPRSP07814 1512 aaKnown RBP4.77□□□□□ -1.65
HMGB3P11-201ENST00000440127 GRIN2AQ12879 1464 aa4.76□□□□□ -1.65
HMGB3P11-201ENST00000440127 ZC3H12DA2A288 527 aaKnown RBP4.76□□□□□ -1.65
HMGB3P11-201ENST00000440127 GLI4P10075 376 aa4.76□□□□□ -1.65
HMGB3P11-201ENST00000440127 SYN1P17600 705 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms