RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 DPH5Q9H2P9 285 aa12.9□□□□□ -0.34
SMPD4-209ENST00000439886 MYH10P35580 1976 aa12.9□□□□□ -0.34
SMPD4-209ENST00000439886 ZC3H4Q9UPT8 1303 aaKnown RBP12.9□□□□□ -0.34
SMPD4-209ENST00000439886 KCNK3O14649 394 aa12.9□□□□□ -0.34
SMPD4-209ENST00000439886 CYP27B1O15528 508 aa12.9□□□□□ -0.34
SMPD4-209ENST00000439886 DNAAF5Q86Y56 855 aa12.9□□□□□ -0.34
SMPD4-209ENST00000439886 SPATA5Q8NB90 893 aa12.9□□□□□ -0.34
SMPD4-209ENST00000439886 MICAL1Q8TDZ2 1067 aa12.9□□□□□ -0.34
SMPD4-209ENST00000439886 DCAF5Q96JK2 942 aa12.9□□□□□ -0.34
SMPD4-209ENST00000439886 TMEM165Q9HC07 324 aa12.9□□□□□ -0.34
SMPD4-209ENST00000439886 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.89□□□□□ -0.35
SMPD4-209ENST00000439886 NMT2O60551 498 aa12.89□□□□□ -0.35
SMPD4-209ENST00000439886 CIAO1O76071 339 aa12.89□□□□□ -0.35
SMPD4-209ENST00000439886 FCER1AP12319 257 aa12.89□□□□□ -0.35
SMPD4-209ENST00000439886 UBE3CQ15386 1083 aa12.89□□□□□ -0.35
SMPD4-209ENST00000439886 CADPS2Q86UW7 1296 aa12.89□□□□□ -0.35
SMPD4-209ENST00000439886 SPATA20Q8TB22 786 aa12.89□□□□□ -0.35
SMPD4-209ENST00000439886 MTRQ99707 1265 aa12.89□□□□□ -0.35
SMPD4-209ENST00000439886 VAT1LQ9HCJ6 419 aa12.89□□□□□ -0.35
SMPD4-209ENST00000439886 ANO9A1A5B4 782 aa12.89□□□□□ -0.35
SMPD4-209ENST00000439886 ZNF233A6NK53 670 aa12.89□□□□□ -0.35
SMPD4-209ENST00000439886 SNUPNO95149 360 aaKnown RBP12.89□□□□□ -0.35
SMPD4-209ENST00000439886 KCNA4P22459 653 aa12.89□□□□□ -0.35
SMPD4-209ENST00000439886 FAM133BQ5BKY9 247 aaKnown RBP12.89□□□□□ -0.35
SMPD4-209ENST00000439886 ARFGAP2Q8N6H7 521 aa12.89□□□□□ -0.35
SMPD4-209ENST00000439886 CCDC155Q8N6L0 562 aa12.89□□□□□ -0.35
SMPD4-209ENST00000439886 CDK5RAP3Q96JB5 506 aa12.89□□□□□ -0.35
SMPD4-209ENST00000439886 NUP58Q9BVL2 599 aa12.89□□□□□ -0.35
SMPD4-209ENST00000439886 JAG2Q9Y219 1238 aa12.89□□□□□ -0.35
SMPD4-209ENST00000439886 TECPR2O15040 1411 aa12.89□□□□□ -0.35
SMPD4-209ENST00000439886 STK36Q9NRP7 1315 aa12.89□□□□□ -0.35
SMPD4-209ENST00000439886 GSG1L2A8MUP6 293 aa12.89□□□□□ -0.35
SMPD4-209ENST00000439886 PYGLP06737 847 aa12.89□□□□□ -0.35
SMPD4-209ENST00000439886 VEGFAP15692 232 aaPredicted RBP12.89□□□□□ -0.35
SMPD4-209ENST00000439886 EEF1GP26641 437 aaKnown RBP12.89□□□□□ -0.35
SMPD4-209ENST00000439886 SLC1A4P43007 532 aa12.89□□□□□ -0.35
SMPD4-209ENST00000439886 BCAMP50895 628 aa12.89□□□□□ -0.35
SMPD4-209ENST00000439886 MYO1EQ12965 1108 aa12.89□□□□□ -0.35
SMPD4-209ENST00000439886 RAPGEF1Q13905 1077 aa12.89□□□□□ -0.35
SMPD4-209ENST00000439886 INF2Q27J81 1249 aa12.89□□□□□ -0.35
SMPD4-209ENST00000439886 HEATR3Q7Z4Q2 680 aa12.89□□□□□ -0.35
SMPD4-209ENST00000439886 TBC1D1Q86TI0 1168 aaPredicted RBP12.89□□□□□ -0.35
SMPD4-209ENST00000439886 IRF2BP1Q8IU81 584 aa12.89□□□□□ -0.35
SMPD4-209ENST00000439886 KSR1Q8IVT5 923 aa12.89□□□□□ -0.35
SMPD4-209ENST00000439886 TTLL11Q8NHH1 800 aa12.89□□□□□ -0.35
SMPD4-209ENST00000439886 CYFIP2Q96F07 1278 aa12.89□□□□□ -0.35
SMPD4-209ENST00000439886 CHCHD3Q9NX63 227 aaKnown RBP12.89□□□□□ -0.35
SMPD4-209ENST00000439886 TACC3Q9Y6A5 838 aa12.89□□□□□ -0.35
SMPD4-209ENST00000439886 CRYBG1Q9Y4K1 1723 aa12.88□□□□□ -0.35
SMPD4-209ENST00000439886 LAMA4Q16363 1823 aa12.88□□□□□ -0.35
SMPD4-209ENST00000439886 LRRC53A6NM62 1247 aa12.88□□□□□ -0.35
SMPD4-209ENST00000439886 VIMP08670 466 aaKnown RBP12.88□□□□□ -0.35
SMPD4-209ENST00000439886 RANBP1P43487 201 aa12.88□□□□□ -0.35
SMPD4-209ENST00000439886 IFNAR2P48551 515 aa12.88□□□□□ -0.35
SMPD4-209ENST00000439886 LRRC41Q15345 812 aa12.88□□□□□ -0.35
SMPD4-209ENST00000439886 ANKRD40Q6AI12 368 aa12.88□□□□□ -0.35
SMPD4-209ENST00000439886 CYB5D1Q6P9G0 228 aa12.88□□□□□ -0.35
SMPD4-209ENST00000439886 ATP6V1G3Q96LB4 118 aa12.88□□□□□ -0.35
SMPD4-209ENST00000439886 DNAJC7Q99615 494 aa12.88□□□□□ -0.35
SMPD4-209ENST00000439886 SH3GL2Q99962 352 aa12.88□□□□□ -0.35
SMPD4-209ENST00000439886 TBC1D7Q9P0N9 293 aa12.88□□□□□ -0.35
SMPD4-209ENST00000439886 ZNF232Q9UNY5 417 aa12.88□□□□□ -0.35
SMPD4-209ENST00000439886 OVOS2A0A0G2JMS6 1433 aa12.88□□□□□ -0.35
SMPD4-209ENST00000439886 WDR19Q8NEZ3 1342 aa12.88□□□□□ -0.35
SMPD4-209ENST00000439886 IRS4O14654 1257 aaPredicted RBP12.88□□□□□ -0.35
SMPD4-209ENST00000439886 PALMO75781 387 aa12.88□□□□□ -0.35
SMPD4-209ENST00000439886 RPS6KA3P51812 740 aa12.88□□□□□ -0.35
SMPD4-209ENST00000439886 FAM114A1Q8IWE2 563 aa12.88□□□□□ -0.35
SMPD4-209ENST00000439886 CCDC170Q8IYT3 715 aa12.88□□□□□ -0.35
SMPD4-209ENST00000439886 MMGT1Q8N4V1 131 aa12.88□□□□□ -0.35
SMPD4-209ENST00000439886 RSRC1Q96IZ7 334 aaKnown RBP12.88□□□□□ -0.35
SMPD4-209ENST00000439886 RNF26Q9BY78 433 aaPredicted RBP12.88□□□□□ -0.35
SMPD4-209ENST00000439886 TCP11L1Q9NUJ3 509 aa12.88□□□□□ -0.35
SMPD4-209ENST00000439886 ZNF263O14978 683 aa12.87□□□□□ -0.35
SMPD4-209ENST00000439886 C21orf2O43822 256 aa12.87□□□□□ -0.35
SMPD4-209ENST00000439886 LETM2Q2VYF4 491 aa12.87□□□□□ -0.35
SMPD4-209ENST00000439886 ADSSL1Q8N142 457 aa12.87□□□□□ -0.35
SMPD4-209ENST00000439886 MDM1Q8TC05 714 aa12.87□□□□□ -0.35
SMPD4-209ENST00000439886 VCPKMTQ9H867 229 aa12.87□□□□□ -0.35
SMPD4-209ENST00000439886 STK38LQ9Y2H1 464 aa12.87□□□□□ -0.35
SMPD4-209ENST00000439886 GMNCA6NCL1 334 aa12.87□□□□□ -0.35
SMPD4-209ENST00000439886 KIF4AO95239 1232 aa12.87□□□□□ -0.35
SMPD4-209ENST00000439886 UQCRFS1P1P0C7P4 283 aa12.87□□□□□ -0.35
SMPD4-209ENST00000439886 SLC5A1P13866 664 aa12.87□□□□□ -0.35
SMPD4-209ENST00000439886 PAX3P23760 479 aa12.87□□□□□ -0.35
SMPD4-209ENST00000439886 SH3RF1Q7Z6J0 888 aa12.87□□□□□ -0.35
SMPD4-209ENST00000439886 MYLK4Q86YV6 388 aaPredicted RBP12.87□□□□□ -0.35
SMPD4-209ENST00000439886 CRYMQ14894 314 aa12.87□□□□□ -0.35
SMPD4-209ENST00000439886 KIAA0753Q2KHM9 967 aa12.87□□□□□ -0.35
SMPD4-209ENST00000439886 GKAP1Q5VSY0 366 aaPredicted RBP12.87□□□□□ -0.35
SMPD4-209ENST00000439886 SPATS2Q86XZ4 545 aaKnown RBP12.87□□□□□ -0.35
SMPD4-209ENST00000439886 ELOA2Q8IYF1 753 aaPredicted RBP12.87□□□□□ -0.35
SMPD4-209ENST00000439886 DYDC1Q8WWB3 177 aa12.87□□□□□ -0.35
SMPD4-209ENST00000439886 CASKIN2Q8WXE0 1202 aa12.87□□□□□ -0.35
SMPD4-209ENST00000439886 P2RX5Q93086 422 aa12.87□□□□□ -0.35
SMPD4-209ENST00000439886 SPDL1Q96EA4 605 aa12.87□□□□□ -0.35
SMPD4-209ENST00000439886 SH2D4AQ9H788 454 aa12.87□□□□□ -0.35
SMPD4-209ENST00000439886 ARHGAP20Q9P2F6 1191 aa12.87□□□□□ -0.35
SMPD4-209ENST00000439886 LRRC10BA6NIK2 292 aa12.86□□□□□ -0.35
SMPD4-209ENST00000439886 TSPY2A6NKD2 308 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms