RNA–Protein interactions for RNA: ENST00000439697.1

GTF3C5-206, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 3

Gene GTF3C5, Length 823 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-206ENST00000439697 GRM4Q14833 912 aa13.37□□□□□ -0.27
GTF3C5-206ENST00000439697 RALYLQ86SE5 291 aaKnown RBP13.37□□□□□ -0.27
GTF3C5-206ENST00000439697 PCSK9Q8NBP7 692 aaKnown RBP13.37□□□□□ -0.27
GTF3C5-206ENST00000439697 NUP133Q8WUM0 1156 aa13.37□□□□□ -0.27
GTF3C5-206ENST00000439697 TOX2Q96NM4 488 aa13.37□□□□□ -0.27
GTF3C5-206ENST00000439697 SPC25Q9HBM1 224 aa13.37□□□□□ -0.27
GTF3C5-206ENST00000439697 XIRP2A4UGR9 3374 aa13.37□□□□□ -0.27
GTF3C5-206ENST00000439697 OPLAHO14841 1288 aa13.36□□□□□ -0.27
GTF3C5-206ENST00000439697 SLC27A2O14975 620 aa13.36□□□□□ -0.27
GTF3C5-206ENST00000439697 CYTH3O43739 400 aa13.36□□□□□ -0.27
GTF3C5-206ENST00000439697 PPP1R11O60927 126 aaPredicted RBP13.36□□□□□ -0.27
GTF3C5-206ENST00000439697 PTGS1P23219 599 aa13.36□□□□□ -0.27
GTF3C5-206ENST00000439697 CALML3P27482 149 aa13.36□□□□□ -0.27
GTF3C5-206ENST00000439697 MRPS5P82675 430 aaKnown RBP13.36□□□□□ -0.27
GTF3C5-206ENST00000439697 USH1GQ495M9 461 aa13.36□□□□□ -0.27
GTF3C5-206ENST00000439697 DUSP28Q4G0W2 176 aa13.36□□□□□ -0.27
GTF3C5-206ENST00000439697 GNASQ5JWF2 1037 aa13.36□□□□□ -0.27
GTF3C5-206ENST00000439697 CHST3Q7LGC8 479 aa13.36□□□□□ -0.27
GTF3C5-206ENST00000439697 TLK2Q86UE8 772 aa13.36□□□□□ -0.27
GTF3C5-206ENST00000439697 SYTL5Q8TDW5 730 aaPredicted RBP13.36□□□□□ -0.27
GTF3C5-206ENST00000439697 TBC1D5Q92609 795 aa13.36□□□□□ -0.27
GTF3C5-206ENST00000439697 MAP3K14Q99558 947 aa13.36□□□□□ -0.27
GTF3C5-206ENST00000439697 RIOX1Q9H6W3 641 aa13.36□□□□□ -0.27
GTF3C5-206ENST00000439697 STARD7Q9NQZ5 370 aa13.36□□□□□ -0.27
GTF3C5-206ENST00000439697 COL20A1Q9P218 1284 aa13.36□□□□□ -0.27
GTF3C5-206ENST00000439697 TIMP1P01033 207 aa13.35□□□□□ -0.27
GTF3C5-206ENST00000439697 CSF2RAP15509 400 aa13.35□□□□□ -0.27
GTF3C5-206ENST00000439697 WTAPQ15007 396 aa13.35□□□□□ -0.27
GTF3C5-206ENST00000439697 SART3Q15020 963 aaKnown RBP13.35□□□□□ -0.27
GTF3C5-206ENST00000439697 TMEM240Q5SV17 173 aa13.35□□□□□ -0.27
GTF3C5-206ENST00000439697 CREB3L3Q68CJ9 461 aa13.35□□□□□ -0.27
GTF3C5-206ENST00000439697 KIAA1211Q6ZU35 1233 aa13.35□□□□□ -0.27
GTF3C5-206ENST00000439697 EEPD1Q7L9B9 569 aa13.35□□□□□ -0.27
GTF3C5-206ENST00000439697 FBXO11Q86XK2 927 aa13.35□□□□□ -0.27
GTF3C5-206ENST00000439697 MICALL1Q8N3F8 863 aa13.35□□□□□ -0.27
GTF3C5-206ENST00000439697 SLC43A3Q8NBI5 491 aa13.35□□□□□ -0.27
GTF3C5-206ENST00000439697 GLT1D1Q96MS3 346 aa13.35□□□□□ -0.27
GTF3C5-206ENST00000439697 LY9Q9HBG7 655 aa13.35□□□□□ -0.27
GTF3C5-206ENST00000439697 MRPL11Q9Y3B7 192 aaKnown RBP13.35□□□□□ -0.27
GTF3C5-206ENST00000439697 ERICH2A1L162 156 aa13.34□□□□□ -0.27
GTF3C5-206ENST00000439697 DCDC2CA8MYV0 355 aa13.34□□□□□ -0.27
GTF3C5-206ENST00000439697 ZBTB5O15062 677 aa13.34□□□□□ -0.27
GTF3C5-206ENST00000439697 HOXD11P31277 338 aaPredicted RBP13.34□□□□□ -0.27
GTF3C5-206ENST00000439697 HSD17B4P51659 736 aa13.34□□□□□ -0.27
GTF3C5-206ENST00000439697 BEX3Q00994 111 aa13.34□□□□□ -0.27
GTF3C5-206ENST00000439697 TFF2Q03403 129 aa13.34□□□□□ -0.27
GTF3C5-206ENST00000439697 FSCN1Q16658 493 aaKnown RBP13.34□□□□□ -0.27
GTF3C5-206ENST00000439697 TMEM67Q5HYA8 995 aa13.34□□□□□ -0.27
GTF3C5-206ENST00000439697 MCF2L2Q86YR7 1114 aa13.34□□□□□ -0.27
GTF3C5-206ENST00000439697 IL27Q8NEV9 243 aa13.34□□□□□ -0.27
GTF3C5-206ENST00000439697 AMNQ9BXJ7 453 aa13.34□□□□□ -0.27
GTF3C5-206ENST00000439697 WDR11Q9BZH6 1224 aa13.34□□□□□ -0.27
GTF3C5-206ENST00000439697 PPP1R12CQ9BZL4 782 aa13.34□□□□□ -0.27
GTF3C5-206ENST00000439697 NKX2-4Q9H2Z4 354 aa13.34□□□□□ -0.27
GTF3C5-206ENST00000439697 VAT1LQ9HCJ6 419 aa13.34□□□□□ -0.27
GTF3C5-206ENST00000439697 GPHNQ9NQX3 736 aaPredicted RBP13.34□□□□□ -0.27
GTF3C5-206ENST00000439697 TBX21Q9UL17 535 aa13.34□□□□□ -0.27
GTF3C5-206ENST00000439697 GRIN2DO15399 1336 aa13.34□□□□□ -0.27
GTF3C5-206ENST00000439697 MYO9BQ13459 2157 aa13.34□□□□□ -0.27
GTF3C5-206ENST00000439697 CHD7Q9P2D1 2997 aa13.33□□□□□ -0.28
GTF3C5-206ENST00000439697 ARVCFO00192 962 aa13.33□□□□□ -0.28
GTF3C5-206ENST00000439697 SH2B2O14492 632 aaPredicted RBP13.33□□□□□ -0.28
GTF3C5-206ENST00000439697 DYNC1LI2O43237 492 aaPredicted RBP13.33□□□□□ -0.28
GTF3C5-206ENST00000439697 CABYRO75952 493 aa13.33□□□□□ -0.28
GTF3C5-206ENST00000439697 MCM5P33992 734 aa13.33□□□□□ -0.28
GTF3C5-206ENST00000439697 LIFRP42702 1097 aa13.33□□□□□ -0.28
GTF3C5-206ENST00000439697 MFSD5Q6N075 450 aa13.33□□□□□ -0.28
GTF3C5-206ENST00000439697 CCDC62Q6P9F0 684 aa13.33□□□□□ -0.28
GTF3C5-206ENST00000439697 ZNF365Q70YC5 407 aa13.33□□□□□ -0.28
GTF3C5-206ENST00000439697 TAAR1Q96RJ0 339 aa13.33□□□□□ -0.28
GTF3C5-206ENST00000439697 ANO2Q9NQ90 1003 aa13.33□□□□□ -0.28
GTF3C5-206ENST00000439697 MAP3K20Q9NYL2 800 aaKnown RBP13.33□□□□□ -0.28
GTF3C5-206ENST00000439697 CXXC1Q9P0U4 656 aaPredicted RBP13.33□□□□□ -0.28
GTF3C5-206ENST00000439697 YBX2Q9Y2T7 364 aaKnown RBP13.33□□□□□ -0.28
GTF3C5-206ENST00000439697 MROH7Q68CQ1 1323 aa13.33□□□□□ -0.28
GTF3C5-206ENST00000439697 A0A0U1RQG5 324 aaPredicted RBP13.32□□□□□ -0.28
GTF3C5-206ENST00000439697 PRC1O43663 620 aa13.32□□□□□ -0.28
GTF3C5-206ENST00000439697 DHX16O60231 1041 aaKnown RBP13.32□□□□□ -0.28
GTF3C5-206ENST00000439697 DDAH1O94760 285 aa13.32□□□□□ -0.28
GTF3C5-206ENST00000439697 CD4P01730 458 aa13.32□□□□□ -0.28
GTF3C5-206ENST00000439697 SMARCA1P28370 1054 aa13.32□□□□□ -0.28
GTF3C5-206ENST00000439697 PDE4DQ08499 809 aa13.32□□□□□ -0.28
GTF3C5-206ENST00000439697 PPIGQ13427 754 aaKnown RBP eCLIP13.32□□□□□ -0.281e-6■■■□□ 15.7
GTF3C5-206ENST00000439697 TSGA10IPQ3SY00 556 aa13.32□□□□□ -0.28
GTF3C5-206ENST00000439697 RASIP1Q5U651 963 aa13.32□□□□□ -0.28
GTF3C5-206ENST00000439697 CXCL17Q6UXB2 119 aa13.32□□□□□ -0.28
GTF3C5-206ENST00000439697 NOL8Q76FK4 1167 aaKnown RBP13.32□□□□□ -0.28
GTF3C5-206ENST00000439697 CATIPQ7Z7H3 387 aa13.32□□□□□ -0.28
GTF3C5-206ENST00000439697 FAM126BQ8IXS8 530 aa13.32□□□□□ -0.28
GTF3C5-206ENST00000439697 ZNF654Q8IZM8 581 aa13.32□□□□□ -0.28
GTF3C5-206ENST00000439697 SAMD3Q8N6K7 520 aa13.32□□□□□ -0.28
GTF3C5-206ENST00000439697 NSUN6Q8TEA1 469 aaKnown RBP13.32□□□□□ -0.28
GTF3C5-206ENST00000439697 SCFD2Q8WU76 684 aa13.32□□□□□ -0.28
GTF3C5-206ENST00000439697 TMEM87BQ96K49 555 aa13.32□□□□□ -0.28
GTF3C5-206ENST00000439697 PIGSQ96S52 555 aa13.32□□□□□ -0.28
GTF3C5-206ENST00000439697 IWS1Q96ST2 819 aa13.32□□□□□ -0.28
GTF3C5-206ENST00000439697 MPHOSPH6Q99547 160 aaKnown RBP13.32□□□□□ -0.28
GTF3C5-206ENST00000439697 AP5M1Q9H0R1 490 aa13.32□□□□□ -0.28
GTF3C5-206ENST00000439697 MYH6P13533 1939 aa13.31□□□□□ -0.28
GTF3C5-206ENST00000439697 PNMA6FA0A0J9YX94 578 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms