RNA–Protein interactions for RNA: ENST00000439122.6

HDAC8-214, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-214ENST00000439122 TCP10Q12799 353 aa13.54□□□□□ -0.24
HDAC8-214ENST00000439122 PDIA5Q14554 519 aa13.54□□□□□ -0.24
HDAC8-214ENST00000439122 HHIPL2Q6UWX4 724 aa13.54□□□□□ -0.24
HDAC8-214ENST00000439122 NLGN1Q8N2Q7 840 aa13.54□□□□□ -0.24
HDAC8-214ENST00000439122 NAPGQ99747 312 aaPredicted RBP13.54□□□□□ -0.24
HDAC8-214ENST00000439122 NUDT12Q9BQG2 462 aa13.54□□□□□ -0.24
HDAC8-214ENST00000439122 SEMA6BQ9H3T3 888 aa13.54□□□□□ -0.24
HDAC8-214ENST00000439122 DBNDD1Q9H9R9 158 aa13.54□□□□□ -0.24
HDAC8-214ENST00000439122 DDX25Q9UHL0 483 aaKnown RBP13.54□□□□□ -0.24
HDAC8-214ENST00000439122 GUCA1BQ9UMX6 200 aa13.54□□□□□ -0.24
HDAC8-214ENST00000439122 ANKRD31Q8N7Z5 1873 aa13.54□□□□□ -0.24
HDAC8-214ENST00000439122 CRKP46108 304 aa13.53□□□□□ -0.24
HDAC8-214ENST00000439122 CACNB3P54284 484 aa13.53□□□□□ -0.24
HDAC8-214ENST00000439122 UTP14CQ5TAP6 766 aaKnown RBP13.53□□□□□ -0.24
HDAC8-214ENST00000439122 WDR59Q6PJI9 974 aa13.53□□□□□ -0.24
HDAC8-214ENST00000439122 UNC13DQ70J99 1090 aa13.53□□□□□ -0.24
HDAC8-214ENST00000439122 ZFPM1Q8IX07 1006 aa13.53□□□□□ -0.24
HDAC8-214ENST00000439122 CEP112Q8N8E3 955 aa13.53□□□□□ -0.24
HDAC8-214ENST00000439122 GJA10Q969M2 543 aa13.53□□□□□ -0.24
HDAC8-214ENST00000439122 NUP58Q9BVL2 599 aa13.53□□□□□ -0.24
HDAC8-214ENST00000439122 PARD6BQ9BYG5 372 aa13.53□□□□□ -0.24
HDAC8-214ENST00000439122 PSTPIP2Q9H939 334 aa13.53□□□□□ -0.24
HDAC8-214ENST00000439122 MYO1AQ9UBC5 1043 aa13.53□□□□□ -0.24
HDAC8-214ENST00000439122 TRIM10Q9UDY6 481 aa13.53□□□□□ -0.24
HDAC8-214ENST00000439122 REXO2Q9Y3B8 237 aaKnown RBP13.53□□□□□ -0.24
HDAC8-214ENST00000439122 ADAMTSL1Q8N6G6 1762 aa13.53□□□□□ -0.24
HDAC8-214ENST00000439122 MIIPQ5JXC2 388 aa13.53□□□□□ -0.24
HDAC8-214ENST00000439122 PPP4R3AQ6IN85 833 aa13.53□□□□□ -0.24
HDAC8-214ENST00000439122 RAD54LQ92698 747 aa13.53□□□□□ -0.24
HDAC8-214ENST00000439122 KCNQ5Q9NR82 932 aa13.53□□□□□ -0.24
HDAC8-214ENST00000439122 ST7Q9NRC1 585 aa13.53□□□□□ -0.24
HDAC8-214ENST00000439122 ZNHIT6Q9NWK9 470 aaKnown RBP13.53□□□□□ -0.24
HDAC8-214ENST00000439122 PVALEFA0A1B0GWK0 134 aa13.52□□□□□ -0.24
HDAC8-214ENST00000439122 FAM196BA6NMK8 535 aa13.52□□□□□ -0.24
HDAC8-214ENST00000439122 NKRFO15226 690 aaKnown RBP eCLIP13.52□□□□□ -0.24
HDAC8-214ENST00000439122 PDE6BP35913 854 aa13.52□□□□□ -0.24
HDAC8-214ENST00000439122 CLK2P49760 499 aaKnown RBP13.52□□□□□ -0.24
HDAC8-214ENST00000439122 GABPB1Q06547 395 aaPredicted RBP13.52□□□□□ -0.24
HDAC8-214ENST00000439122 TUBB2AQ13885 445 aa13.52□□□□□ -0.24
HDAC8-214ENST00000439122 COBLL1Q53SF7 1204 aa13.52□□□□□ -0.24
HDAC8-214ENST00000439122 FKBP15Q5T1M5 1219 aa13.52□□□□□ -0.24
HDAC8-214ENST00000439122 CENPPQ6IPU0 288 aa13.52□□□□□ -0.24
HDAC8-214ENST00000439122 COL23A1Q86Y22 540 aaPredicted RBP13.52□□□□□ -0.24
HDAC8-214ENST00000439122 KIAA0825Q8IV33 1275 aa13.52□□□□□ -0.24
HDAC8-214ENST00000439122 RETREG2Q8NC44 543 aa13.52□□□□□ -0.24
HDAC8-214ENST00000439122 DDX12PQ92771 950 aa13.52□□□□□ -0.24
HDAC8-214ENST00000439122 ZNF622Q969S3 477 aaKnown RBP eCLIP13.52□□□□□ -0.24
HDAC8-214ENST00000439122 TUBB2BQ9BVA1 445 aa13.52□□□□□ -0.24
HDAC8-214ENST00000439122 TTYH3Q9C0H2 523 aa13.52□□□□□ -0.24
HDAC8-214ENST00000439122 MYH4Q9Y623 1939 aa13.52□□□□□ -0.25
HDAC8-214ENST00000439122 RASSF10A6NK89 507 aa13.52□□□□□ -0.25
HDAC8-214ENST00000439122 TFRCP02786 760 aaKnown RBP13.52□□□□□ -0.25
HDAC8-214ENST00000439122 RBM5P52756 815 aaKnown RBP eCLIP13.52□□□□□ -0.25
HDAC8-214ENST00000439122 QSER1Q2KHR3 1735 aa13.52□□□□□ -0.25
HDAC8-214ENST00000439122 CC2D1AQ6P1N0 951 aaPredicted RBP13.52□□□□□ -0.25
HDAC8-214ENST00000439122 KCNK18Q7Z418 384 aa13.52□□□□□ -0.25
HDAC8-214ENST00000439122 HAS1Q92839 578 aa13.52□□□□□ -0.25
HDAC8-214ENST00000439122 UIMC1Q96RL1 719 aa13.52□□□□□ -0.25
HDAC8-214ENST00000439122 PCDHAC2Q9Y5I4 1007 aa13.52□□□□□ -0.25
HDAC8-214ENST00000439122 MMP10P09238 476 aa13.51□□□□□ -0.25
HDAC8-214ENST00000439122 MEA1Q16626 185 aa13.51□□□□□ -0.25
HDAC8-214ENST00000439122 ZSCAN29Q8IWY8 852 aaPredicted RBP13.51□□□□□ -0.25
HDAC8-214ENST00000439122 MASTLQ96GX5 879 aa13.51□□□□□ -0.25
HDAC8-214ENST00000439122 CCDC17Q96LX7 622 aa13.51□□□□□ -0.25
HDAC8-214ENST00000439122 DNAJC18Q9H819 358 aa13.51□□□□□ -0.25
HDAC8-214ENST00000439122 ARFGAP3Q9NP61 516 aa13.51□□□□□ -0.25
HDAC8-214ENST00000439122 PCDHA12Q9UN75 941 aa13.51□□□□□ -0.25
HDAC8-214ENST00000439122 TFR2Q9UP52 801 aa13.51□□□□□ -0.25
HDAC8-214ENST00000439122 USP17L15C9J2P7 530 aa13.51□□□□□ -0.25
HDAC8-214ENST00000439122 USP17L13C9JLJ4 530 aa13.51□□□□□ -0.25
HDAC8-214ENST00000439122 USP17L11C9JVI0 530 aa13.51□□□□□ -0.25
HDAC8-214ENST00000439122 USP17L18D6R9N7 530 aa13.51□□□□□ -0.25
HDAC8-214ENST00000439122 USP17L22D6RA61 530 aa13.51□□□□□ -0.25
HDAC8-214ENST00000439122 USP17L17D6RBQ6 530 aa13.51□□□□□ -0.25
HDAC8-214ENST00000439122 USP17L19D6RCP7 530 aa13.51□□□□□ -0.25
HDAC8-214ENST00000439122 USP17L20D6RJB6 530 aa13.51□□□□□ -0.25
HDAC8-214ENST00000439122 SLC1A4P43007 532 aa13.51□□□□□ -0.25
HDAC8-214ENST00000439122 HERVK_113P62684 666 aa13.51□□□□□ -0.25
HDAC8-214ENST00000439122 KRT83P78385 493 aa13.51□□□□□ -0.25
HDAC8-214ENST00000439122 ZBED6P86452 979 aa13.51□□□□□ -0.25
HDAC8-214ENST00000439122 USP17L24Q0WX57 530 aa13.51□□□□□ -0.25
HDAC8-214ENST00000439122 ECM1Q16610 540 aa13.51□□□□□ -0.25
HDAC8-214ENST00000439122 SHROOM1Q2M3G4 852 aaPredicted RBP13.51□□□□□ -0.25
HDAC8-214ENST00000439122 CCDC122Q5T0U0 273 aa13.51□□□□□ -0.25
HDAC8-214ENST00000439122 USP17L6PQ6QN14 398 aa13.51□□□□□ -0.25
HDAC8-214ENST00000439122 PODNQ7Z5L7 613 aa13.51□□□□□ -0.25
HDAC8-214ENST00000439122 KIAA1328Q86T90 577 aa13.51□□□□□ -0.25
HDAC8-214ENST00000439122 ZDHHC15Q96MV8 337 aa13.51□□□□□ -0.25
HDAC8-214ENST00000439122 LRRC27Q9C0I9 530 aa13.51□□□□□ -0.25
HDAC8-214ENST00000439122 EHD4Q9H223 541 aa13.51□□□□□ -0.25
HDAC8-214ENST00000439122 HAUS4Q9H6D7 363 aa13.51□□□□□ -0.25
HDAC8-214ENST00000439122 NHEJ1Q9H9Q4 299 aaPredicted RBP13.51□□□□□ -0.25
HDAC8-214ENST00000439122 MYH7BA7E2Y1 1941 aa13.5□□□□□ -0.25
HDAC8-214ENST00000439122 IPO7O95373 1038 aaKnown RBP13.5□□□□□ -0.25
HDAC8-214ENST00000439122 EEF2P13639 858 aaKnown RBP13.5□□□□□ -0.25
HDAC8-214ENST00000439122 CYLC1P35663 651 aaPredicted RBP13.5□□□□□ -0.25
HDAC8-214ENST00000439122 LRRC41Q15345 812 aa13.5□□□□□ -0.25
HDAC8-214ENST00000439122 CERKLQ49MI3 558 aaPredicted RBP13.5□□□□□ -0.25
HDAC8-214ENST00000439122 TMEM119Q4V9L6 283 aa13.5□□□□□ -0.25
HDAC8-214ENST00000439122 GUF1Q8N442 669 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms