RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 ACTN1P12814 892 aa12.16□□□□□ -0.46
SCN4A-201ENST00000435607 HSP90AA5PQ58FG0 334 aa12.16□□□□□ -0.46
SCN4A-201ENST00000435607 LRCH2Q5VUJ6 765 aa12.16□□□□□ -0.46
SCN4A-201ENST00000435607 CEP85Q6P2H3 762 aa12.16□□□□□ -0.46
SCN4A-201ENST00000435607 NEK8Q86SG6 692 aa12.16□□□□□ -0.46
SCN4A-201ENST00000435607 EFHBQ8N7U6 833 aa12.16□□□□□ -0.46
SCN4A-201ENST00000435607 ABCF3Q9NUQ8 709 aa12.16□□□□□ -0.46
SCN4A-201ENST00000435607 TAB2Q9NYJ8 693 aa12.16□□□□□ -0.46
SCN4A-201ENST00000435607 TRIM35Q9UPQ4 493 aa12.16□□□□□ -0.46
SCN4A-201ENST00000435607 RIPOR2Q9Y4F9 1068 aa12.16□□□□□ -0.46
SCN4A-201ENST00000435607 BNIP3LO60238 219 aa12.16□□□□□ -0.46
SCN4A-201ENST00000435607 ZNF202O95125 648 aa12.16□□□□□ -0.46
SCN4A-201ENST00000435607 CTSWP56202 376 aa12.16□□□□□ -0.46
SCN4A-201ENST00000435607 PPARAQ07869 468 aa12.16□□□□□ -0.46
SCN4A-201ENST00000435607 ZBTB17Q13105 803 aa12.16□□□□□ -0.46
SCN4A-201ENST00000435607 BLIDQ8IZY5 108 aa12.16□□□□□ -0.46
SCN4A-201ENST00000435607 FAM207AQ9NSI2 230 aaPredicted RBP12.16□□□□□ -0.46
SCN4A-201ENST00000435607 DDX41Q9UJV9 622 aaKnown RBP12.16□□□□□ -0.46
SCN4A-201ENST00000435607 PPEF1O14829 653 aaPredicted RBP12.15□□□□□ -0.46
SCN4A-201ENST00000435607 FANCCQ00597 558 aa12.15□□□□□ -0.46
SCN4A-201ENST00000435607 DOK7Q18PE1 504 aa12.15□□□□□ -0.46
SCN4A-201ENST00000435607 LRRC8CQ8TDW0 803 aa12.15□□□□□ -0.46
SCN4A-201ENST00000435607 PPWD1Q96BP3 646 aaKnown RBP12.15□□□□□ -0.46
SCN4A-201ENST00000435607 ZBTB18Q99592 522 aa12.15□□□□□ -0.46
SCN4A-201ENST00000435607 NLRC4Q9NPP4 1024 aa12.15□□□□□ -0.46
SCN4A-201ENST00000435607 BLMP54132 1417 aaPredicted RBP12.15□□□□□ -0.46
SCN4A-201ENST00000435607 SEMA3EO15041 775 aa12.15□□□□□ -0.46
SCN4A-201ENST00000435607 SRGAP2CP0DJJ0 459 aa12.15□□□□□ -0.46
SCN4A-201ENST00000435607 C16orf72Q14CZ0 275 aa12.15□□□□□ -0.46
SCN4A-201ENST00000435607 C20orf194Q5TEA3 1177 aa12.15□□□□□ -0.46
SCN4A-201ENST00000435607 ARHGEF18Q6ZSZ5 1173 aa12.15□□□□□ -0.46
SCN4A-201ENST00000435607 KBTBD3Q8NAB2 608 aa12.15□□□□□ -0.46
SCN4A-201ENST00000435607 CDC26Q8NHZ8 85 aa12.15□□□□□ -0.46
SCN4A-201ENST00000435607 AMNQ9BXJ7 453 aa12.15□□□□□ -0.46
SCN4A-201ENST00000435607 BRD1O95696 1058 aa12.15□□□□□ -0.46
SCN4A-201ENST00000435607 DALRD3Q5D0E6 543 aaKnown RBP12.15□□□□□ -0.46
SCN4A-201ENST00000435607 SZRD1Q7Z422 152 aa12.15□□□□□ -0.46
SCN4A-201ENST00000435607 ERO1AQ96HE7 468 aa12.15□□□□□ -0.46
SCN4A-201ENST00000435607 GAP43P17677 238 aa12.15□□□□□ -0.46
SCN4A-201ENST00000435607 BCAMP50895 628 aa12.15□□□□□ -0.46
SCN4A-201ENST00000435607 ANGPTL8Q6UXH0 198 aa12.15□□□□□ -0.46
SCN4A-201ENST00000435607 LRRC37BQ96QE4 947 aa12.15□□□□□ -0.46
SCN4A-201ENST00000435607 QTRT2Q9H974 415 aaKnown RBP12.15□□□□□ -0.46
SCN4A-201ENST00000435607 PHLPP2Q6ZVD8 1323 aa12.15□□□□□ -0.46
SCN4A-201ENST00000435607 TMEM232C9JQI7 657 aa12.15□□□□□ -0.46
SCN4A-201ENST00000435607 SLC27A2O14975 620 aa12.15□□□□□ -0.46
SCN4A-201ENST00000435607 RC3H1Q5TC82 1133 aaKnown RBP12.15□□□□□ -0.46
SCN4A-201ENST00000435607 PDXDC1Q6P996 788 aa12.15□□□□□ -0.46
SCN4A-201ENST00000435607 GDAP1L1Q96MZ0 367 aa12.15□□□□□ -0.46
SCN4A-201ENST00000435607 WDR11Q9BZH6 1224 aa12.15□□□□□ -0.46
SCN4A-201ENST00000435607 KRT82Q9NSB4 513 aa12.15□□□□□ -0.46
SCN4A-201ENST00000435607 KDM2BQ8NHM5 1336 aa12.15□□□□□ -0.46
SCN4A-201ENST00000435607 ZNF577Q9BSK1 485 aa12.15□□□□□ -0.47
SCN4A-201ENST00000435607 RPRD2Q5VT52 1461 aaKnown RBP12.15□□□□□ -0.47
SCN4A-201ENST00000435607 CHMLP26374 656 aa12.14□□□□□ -0.47
SCN4A-201ENST00000435607 CTNNA1P35221 906 aaKnown RBP12.14□□□□□ -0.47
SCN4A-201ENST00000435607 CLNS1AP54105 237 aaKnown RBP12.14□□□□□ -0.47
SCN4A-201ENST00000435607 MYL7Q01449 175 aa12.14□□□□□ -0.47
SCN4A-201ENST00000435607 DCTPP1Q9H773 170 aa12.14□□□□□ -0.47
SCN4A-201ENST00000435607 KMT5AQ9NQR1 393 aa12.14□□□□□ -0.47
SCN4A-201ENST00000435607 PPP1R9AQ9ULJ8 1098 aa12.14□□□□□ -0.47
SCN4A-201ENST00000435607 ARAP1Q96P48 1450 aa12.14□□□□□ -0.47
SCN4A-201ENST00000435607 EIF2AK4Q9P2K8 1649 aaKnown RBP12.14□□□□□ -0.47
SCN4A-201ENST00000435607 IPO5O00410 1097 aaKnown RBP12.14□□□□□ -0.47
SCN4A-201ENST00000435607 KCNK3O14649 394 aa12.14□□□□□ -0.47
SCN4A-201ENST00000435607 OR52Z1P0C646 297 aa12.14□□□□□ -0.47
SCN4A-201ENST00000435607 TECP42680 631 aa12.14□□□□□ -0.47
SCN4A-201ENST00000435607 SCNN1DP51172 638 aa12.14□□□□□ -0.47
SCN4A-201ENST00000435607 ESRRGP62508 458 aa12.14□□□□□ -0.47
SCN4A-201ENST00000435607 C7orf31Q8N865 590 aa12.14□□□□□ -0.47
SCN4A-201ENST00000435607 CCHCR1Q8TD31 782 aa12.14□□□□□ -0.47
SCN4A-201ENST00000435607 ZSCAN10Q96SZ4 725 aaPredicted RBP12.14□□□□□ -0.47
SCN4A-201ENST00000435607 CFAP61Q8NHU2 1237 aa12.14□□□□□ -0.47
SCN4A-201ENST00000435607 ALKBH8Q96BT7 664 aaKnown RBP12.14□□□□□ -0.47
SCN4A-201ENST00000435607 LAMC3Q9Y6N6 1575 aa12.14□□□□□ -0.47
SCN4A-201ENST00000435607 AOX1Q06278 1338 aa12.14□□□□□ -0.47
SCN4A-201ENST00000435607 ZBBXA8MT70 800 aa12.14□□□□□ -0.47
SCN4A-201ENST00000435607 ASPRV1Q53RT3 343 aa12.14□□□□□ -0.47
SCN4A-201ENST00000435607 TRIM15Q9C019 465 aa12.14□□□□□ -0.47
SCN4A-201ENST00000435607 MAGEF1Q9HAY2 307 aa12.14□□□□□ -0.47
SCN4A-201ENST00000435607 KCNH4Q9UQ05 1017 aa12.14□□□□□ -0.47
SCN4A-201ENST00000435607 HIP1RO75146 1068 aa12.14□□□□□ -0.47
SCN4A-201ENST00000435607 RAP1GDS1P52306 607 aa12.14□□□□□ -0.47
SCN4A-201ENST00000435607 FAM47AQ5JRC9 791 aa12.14□□□□□ -0.47
SCN4A-201ENST00000435607 PI4K2BQ8TCG2 481 aa12.14□□□□□ -0.47
SCN4A-201ENST00000435607 CENPKQ9BS16 269 aa12.14□□□□□ -0.47
SCN4A-201ENST00000435607 POLR3CQ9BUI4 534 aaPredicted RBP12.14□□□□□ -0.47
SCN4A-201ENST00000435607 MRPL47Q9HD33 250 aaKnown RBP12.14□□□□□ -0.47
SCN4A-201ENST00000435607 GIMAP8Q8ND71 665 aaPredicted RBP12.14□□□□□ -0.47
SCN4A-201ENST00000435607 A2MP01023 1474 aa12.14□□□□□ -0.47
SCN4A-201ENST00000435607 EIF2B5Q13144 721 aaKnown RBP12.13□□□□□ -0.47
SCN4A-201ENST00000435607 WHAMMP3Q1A5X7 153 aa12.13□□□□□ -0.47
SCN4A-201ENST00000435607 KIAA1755Q5JYT7 1200 aa12.13□□□□□ -0.47
SCN4A-201ENST00000435607 ATG16L1Q676U5 607 aa12.13□□□□□ -0.47
SCN4A-201ENST00000435607 ZNF467Q7Z7K2 595 aaPredicted RBP12.13□□□□□ -0.47
SCN4A-201ENST00000435607 TBC1D19Q8N5T2 526 aa12.13□□□□□ -0.47
SCN4A-201ENST00000435607 RPF1Q9H9Y2 349 aaKnown RBP12.13□□□□□ -0.47
SCN4A-201ENST00000435607 VPS54Q9P1Q0 977 aa12.13□□□□□ -0.47
SCN4A-201ENST00000435607 ZNF518AQ6AHZ1 1483 aa12.13□□□□□ -0.47
SCN4A-201ENST00000435607 KLRF2D3W0D1 207 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms