RNA–Protein interactions for RNA: ENST00000435606.1

LDLRAD4-204, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best)

Gene LDLRAD4, Length 8,032 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-204ENST00000435606 CMTR1Q8N1G2 835 aaKnown RBP11.61□□□□□ -0.55
LDLRAD4-204ENST00000435606 PCDHA4Q9UN74 947 aa11.61□□□□□ -0.55
LDLRAD4-204ENST00000435606 PHLPP2Q6ZVD8 1323 aa11.61□□□□□ -0.55
LDLRAD4-204ENST00000435606 CSPG5O95196 566 aa11.61□□□□□ -0.55
LDLRAD4-204ENST00000435606 RASSF2P50749 326 aa11.61□□□□□ -0.55
LDLRAD4-204ENST00000435606 APOBEC3FQ8IUX4 373 aaKnown RBP11.61□□□□□ -0.55
LDLRAD4-204ENST00000435606 THEM5Q8N1Q8 247 aa11.61□□□□□ -0.55
LDLRAD4-204ENST00000435606 STK17AQ9UEE5 414 aa11.61□□□□□ -0.55
LDLRAD4-204ENST00000435606 ADGRL2O95490 1459 aa11.61□□□□□ -0.55
LDLRAD4-204ENST00000435606 MYCP01106 439 aaPredicted RBP11.61□□□□□ -0.55
LDLRAD4-204ENST00000435606 GOLGA8FQ08AF8 430 aa11.61□□□□□ -0.55
LDLRAD4-204ENST00000435606 GOLGA8DPQ0D2H9 430 aa11.61□□□□□ -0.55
LDLRAD4-204ENST00000435606 GRAPQ13588 217 aa11.61□□□□□ -0.55
LDLRAD4-204ENST00000435606 FAM26FQ5R3K3 315 aa11.61□□□□□ -0.55
LDLRAD4-204ENST00000435606 GRAPLQ8TC17 118 aaPredicted RBP11.61□□□□□ -0.55
LDLRAD4-204ENST00000435606 OTUD7AQ8TE49 926 aaPredicted RBP11.61□□□□□ -0.55
LDLRAD4-204ENST00000435606 DONSONQ9NYP3 566 aa11.61□□□□□ -0.55
LDLRAD4-204ENST00000435606 SPDYE2BA6NHP3 402 aa11.61□□□□□ -0.55
LDLRAD4-204ENST00000435606 H7C0C1 242 aa11.61□□□□□ -0.55
LDLRAD4-204ENST00000435606 PPFIA4O75335 1185 aa11.61□□□□□ -0.55
LDLRAD4-204ENST00000435606 GDF11O95390 407 aa11.61□□□□□ -0.55
LDLRAD4-204ENST00000435606 RPN1P04843 607 aaKnown RBP11.61□□□□□ -0.55
LDLRAD4-204ENST00000435606 USP17L8P0C7I0 530 aa11.61□□□□□ -0.55
LDLRAD4-204ENST00000435606 SPDYE6P0CI01 402 aa11.61□□□□□ -0.55
LDLRAD4-204ENST00000435606 ATP5OP48047 213 aa11.61□□□□□ -0.55
LDLRAD4-204ENST00000435606 TRAPPC10P48553 1259 aa11.61□□□□□ -0.55
LDLRAD4-204ENST00000435606 VSIG1Q86XK7 387 aa11.61□□□□□ -0.55
LDLRAD4-204ENST00000435606 STAMQ92783 540 aa11.61□□□□□ -0.55
LDLRAD4-204ENST00000435606 FGAP02671 866 aa11.6□□□□□ -0.55
LDLRAD4-204ENST00000435606 PSMC2P35998 433 aaKnown RBP11.6□□□□□ -0.55
LDLRAD4-204ENST00000435606 PPARGP37231 505 aaPredicted RBP11.6□□□□□ -0.55
LDLRAD4-204ENST00000435606 CYP4A11Q02928 519 aa11.6□□□□□ -0.55
LDLRAD4-204ENST00000435606 LRRC24Q50LG9 513 aa11.6□□□□□ -0.55
LDLRAD4-204ENST00000435606 MYSM1Q5VVJ2 828 aa11.6□□□□□ -0.55
LDLRAD4-204ENST00000435606 CHMP6Q96FZ7 201 aa11.6□□□□□ -0.55
LDLRAD4-204ENST00000435606 SHROOM2Q13796 1616 aa11.6□□□□□ -0.55
LDLRAD4-204ENST00000435606 NT5C2P49902 561 aa11.6□□□□□ -0.55
LDLRAD4-204ENST00000435606 PHKA1P46020 1223 aa11.6□□□□□ -0.55
LDLRAD4-204ENST00000435606 TCP11Q8WWU5 503 aa11.6□□□□□ -0.55
LDLRAD4-204ENST00000435606 ADCY9O60503 1353 aa11.6□□□□□ -0.55
LDLRAD4-204ENST00000435606 IRX4P78413 519 aa11.6□□□□□ -0.55
LDLRAD4-204ENST00000435606 IL17REQ8NFR9 667 aa11.6□□□□□ -0.55
LDLRAD4-204ENST00000435606 OR8K1Q8NGG5 319 aa11.6□□□□□ -0.55
LDLRAD4-204ENST00000435606 URGCPQ8TCY9 931 aa11.6□□□□□ -0.55
LDLRAD4-204ENST00000435606 HDAC11Q96DB2 347 aa11.6□□□□□ -0.55
LDLRAD4-204ENST00000435606 ERO1AQ96HE7 468 aa11.6□□□□□ -0.55
LDLRAD4-204ENST00000435606 JAK2O60674 1132 aa11.6□□□□□ -0.55
LDLRAD4-204ENST00000435606 ASNSP08243 561 aa11.6□□□□□ -0.55
LDLRAD4-204ENST00000435606 EXOC3L4Q17RC7 722 aa11.6□□□□□ -0.55
LDLRAD4-204ENST00000435606 SIX6OS1Q8N1H7 587 aa11.6□□□□□ -0.55
LDLRAD4-204ENST00000435606 SSH3Q8TE77 659 aa11.6□□□□□ -0.55
LDLRAD4-204ENST00000435606 SLITRK6Q9H5Y7 841 aa11.6□□□□□ -0.55
LDLRAD4-204ENST00000435606 KRIT1O00522 736 aa11.6□□□□□ -0.55
LDLRAD4-204ENST00000435606 MMP10P09238 476 aa11.6□□□□□ -0.55
LDLRAD4-204ENST00000435606 IQCB1Q15051 598 aa11.6□□□□□ -0.55
LDLRAD4-204ENST00000435606 RNF219Q5W0B1 726 aaPredicted RBP11.6□□□□□ -0.55
LDLRAD4-204ENST00000435606 FOXP4Q8IVH2 680 aaPredicted RBP11.6□□□□□ -0.55
LDLRAD4-204ENST00000435606 RSRC1Q96IZ7 334 aaKnown RBP11.6□□□□□ -0.55
LDLRAD4-204ENST00000435606 FBXO40Q9UH90 709 aa11.6□□□□□ -0.55
LDLRAD4-204ENST00000435606 MTX1Q13505 466 aa11.6□□□□□ -0.55
LDLRAD4-204ENST00000435606 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.6□□□□□ -0.55
LDLRAD4-204ENST00000435606 SLF1Q9BQI6 1058 aa11.6□□□□□ -0.55
LDLRAD4-204ENST00000435606 RPF1Q9H9Y2 349 aaKnown RBP11.6□□□□□ -0.55
LDLRAD4-204ENST00000435606 HOXC10Q9NYD6 342 aa11.6□□□□□ -0.55
LDLRAD4-204ENST00000435606 CDC42BPGQ6DT37 1551 aa11.59□□□□□ -0.55
LDLRAD4-204ENST00000435606 HOXA7P31268 230 aaPredicted RBP11.59□□□□□ -0.55
LDLRAD4-204ENST00000435606 FASTKD5Q7L8L6 764 aaKnown RBP11.59□□□□□ -0.55
LDLRAD4-204ENST00000435606 SPDYE1Q8NFV5 336 aaPredicted RBP11.59□□□□□ -0.55
LDLRAD4-204ENST00000435606 MAGI2Q86UL8 1455 aa11.59□□□□□ -0.55
LDLRAD4-204ENST00000435606 MAP3K7O43318 606 aa11.59□□□□□ -0.55
LDLRAD4-204ENST00000435606 PFKFB2O60825 505 aa11.59□□□□□ -0.55
LDLRAD4-204ENST00000435606 ZNF75DP51815 510 aa11.59□□□□□ -0.55
LDLRAD4-204ENST00000435606 RFX6Q8HWS3 928 aa11.59□□□□□ -0.55
LDLRAD4-204ENST00000435606 PTPRTO14522 1441 aa11.59□□□□□ -0.55
LDLRAD4-204ENST00000435606 ATF2P15336 505 aa11.59□□□□□ -0.55
LDLRAD4-204ENST00000435606 ARL13BQ3SXY8 428 aa11.59□□□□□ -0.55
LDLRAD4-204ENST00000435606 MFSD14CQ5VZR4 134 aa11.59□□□□□ -0.55
LDLRAD4-204ENST00000435606 PDXDC2PQ6P474 469 aa11.59□□□□□ -0.55
LDLRAD4-204ENST00000435606 FAM149B1Q96BN6 582 aa11.59□□□□□ -0.55
LDLRAD4-204ENST00000435606 PALD1Q9ULE6 856 aa11.59□□□□□ -0.55
LDLRAD4-204ENST00000435606 ZBTB1Q9Y2K1 713 aa11.59□□□□□ -0.55
LDLRAD4-204ENST00000435606 TFAMQ00059 246 aaKnown RBP11.59□□□□□ -0.55
LDLRAD4-204ENST00000435606 ALCAMQ13740 583 aa11.59□□□□□ -0.55
LDLRAD4-204ENST00000435606 CBX8Q9HC52 389 aa11.59□□□□□ -0.55
LDLRAD4-204ENST00000435606 ATG3Q9NT62 314 aa11.59□□□□□ -0.55
LDLRAD4-204ENST00000435606 ATP7BP35670 1465 aa11.59□□□□□ -0.55
LDLRAD4-204ENST00000435606 ARL4AP40617 200 aa11.59□□□□□ -0.55
LDLRAD4-204ENST00000435606 KAZNQ674X7 775 aa11.59□□□□□ -0.55
LDLRAD4-204ENST00000435606 TTBK2Q6IQ55 1244 aa11.59□□□□□ -0.55
LDLRAD4-204ENST00000435606 DSTYKQ6XUX3 929 aa11.59□□□□□ -0.55
LDLRAD4-204ENST00000435606 GPATCH11Q8N954 259 aa11.59□□□□□ -0.55
LDLRAD4-204ENST00000435606 PSPC1Q8WXF1 523 aaKnown RBP11.59□□□□□ -0.55
LDLRAD4-204ENST00000435606 KCNK3O14649 394 aa11.59□□□□□ -0.55
LDLRAD4-204ENST00000435606 RGS16O15492 202 aaPredicted RBP11.59□□□□□ -0.55
LDLRAD4-204ENST00000435606 PTGDRQ13258 359 aa11.59□□□□□ -0.55
LDLRAD4-204ENST00000435606 CCDC13Q8IYE1 715 aa11.59□□□□□ -0.55
LDLRAD4-204ENST00000435606 PRPF38AQ8NAV1 312 aaKnown RBP11.58□□□□□ -0.56
LDLRAD4-204ENST00000435606 PSMB7Q99436 277 aa11.58□□□□□ -0.56
LDLRAD4-204ENST00000435606 ZNF341Q9BYN7 854 aa11.58□□□□□ -0.56
LDLRAD4-204ENST00000435606 IQCA1LA6NCM1 817 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms