RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 GPATCH4Q5T3I0 446 aaKnown RBP20.77■□□□□ 0.92
CLK1-205ENST00000434813 CDC42EP5Q6NZY7 148 aa20.77■□□□□ 0.92
CLK1-205ENST00000434813 UNC13DQ70J99 1090 aa20.77■□□□□ 0.92
CLK1-205ENST00000434813 ADGRF4Q8IZF3 695 aa20.77■□□□□ 0.92
CLK1-205ENST00000434813 SLC35F6Q8N357 371 aa20.77■□□□□ 0.92
CLK1-205ENST00000434813 CEP112Q8N8E3 955 aa20.77■□□□□ 0.92
CLK1-205ENST00000434813 LARP4BQ92615 738 aaKnown RBP20.77■□□□□ 0.92
CLK1-205ENST00000434813 CHP1Q99653 195 aa20.77■□□□□ 0.92
CLK1-205ENST00000434813 NUP58Q9BVL2 599 aa20.77■□□□□ 0.92
CLK1-205ENST00000434813 EHD4Q9H223 541 aa20.77■□□□□ 0.92
CLK1-205ENST00000434813 PVALEFA0A1B0GWK0 134 aa20.77■□□□□ 0.91
CLK1-205ENST00000434813 PPP1R11O60927 126 aaPredicted RBP20.77■□□□□ 0.91
CLK1-205ENST00000434813 HLA-DOAP06340 250 aa20.77■□□□□ 0.91
CLK1-205ENST00000434813 CHRNA5P30532 468 aa20.77■□□□□ 0.91
CLK1-205ENST00000434813 MEA1Q16626 185 aa20.77■□□□□ 0.91
CLK1-205ENST00000434813 DOK7Q18PE1 504 aa20.77■□□□□ 0.91
CLK1-205ENST00000434813 ZSCAN29Q8IWY8 852 aaPredicted RBP20.77■□□□□ 0.91
CLK1-205ENST00000434813 REXO2Q9Y3B8 237 aaKnown RBP20.77■□□□□ 0.91
CLK1-205ENST00000434813 EPN1Q9Y6I3 576 aaPredicted RBP20.77■□□□□ 0.91
CLK1-205ENST00000434813 HOXA7P31268 230 aaPredicted RBP20.76■□□□□ 0.91
CLK1-205ENST00000434813 CHMP4BP1P59074 171 aa20.76■□□□□ 0.91
CLK1-205ENST00000434813 CENPPQ6IPU0 288 aa20.76■□□□□ 0.91
CLK1-205ENST00000434813 TEKT1Q969V4 418 aa20.76■□□□□ 0.91
CLK1-205ENST00000434813 MTMR8Q96EF0 704 aa20.76■□□□□ 0.91
CLK1-205ENST00000434813 CDK5RAP3Q96JB5 506 aa20.76■□□□□ 0.91
CLK1-205ENST00000434813 NAPGQ99747 312 aaPredicted RBP20.76■□□□□ 0.91
CLK1-205ENST00000434813 MYMKA6NI61 221 aa20.75■□□□□ 0.91
CLK1-205ENST00000434813 ATP8B1O43520 1251 aa20.75■□□□□ 0.91
CLK1-205ENST00000434813 TNNI2P48788 182 aa20.75■□□□□ 0.91
CLK1-205ENST00000434813 TSR1Q2NL82 804 aaKnown RBP20.75■□□□□ 0.91
CLK1-205ENST00000434813 KIF4BQ2VIQ3 1234 aa20.75■□□□□ 0.91
CLK1-205ENST00000434813 TMEM119Q4V9L6 283 aa20.75■□□□□ 0.91
CLK1-205ENST00000434813 APOBEC3HQ6NTF7 200 aaKnown RBP20.75■□□□□ 0.91
CLK1-205ENST00000434813 WDR59Q6PJI9 974 aa20.75■□□□□ 0.91
CLK1-205ENST00000434813 CUL5Q93034 780 aa20.75■□□□□ 0.91
CLK1-205ENST00000434813 MXD3Q9BW11 206 aa20.75■□□□□ 0.91
CLK1-205ENST00000434813 SIPA1L1O43166 1804 aa20.75■□□□□ 0.91
CLK1-205ENST00000434813 POTEMA6NI47 508 aa20.75■□□□□ 0.91
CLK1-205ENST00000434813 SCNN1DP51172 638 aa20.75■□□□□ 0.91
CLK1-205ENST00000434813 MCM6Q14566 821 aa20.75■□□□□ 0.91
CLK1-205ENST00000434813 FIGNQ5HY92 759 aa20.75■□□□□ 0.91
CLK1-205ENST00000434813 MIIPQ5JXC2 388 aa20.75■□□□□ 0.91
CLK1-205ENST00000434813 RAD54LQ92698 747 aa20.75■□□□□ 0.91
CLK1-205ENST00000434813 ZNF219Q9P2Y4 722 aaPredicted RBP20.75■□□□□ 0.91
CLK1-205ENST00000434813 ZBTB5O15062 677 aa20.74■□□□□ 0.91
CLK1-205ENST00000434813 ABL1P00519 1130 aa20.74■□□□□ 0.91
CLK1-205ENST00000434813 MTIF2P46199 727 aaKnown RBP20.74■□□□□ 0.91
CLK1-205ENST00000434813 R3HDM1Q15032 1099 aaKnown RBP20.74■□□□□ 0.91
CLK1-205ENST00000434813 KRT79Q5XKE5 535 aa20.74■□□□□ 0.91
CLK1-205ENST00000434813 SNX29Q8TEQ0 813 aa20.74■□□□□ 0.91
CLK1-205ENST00000434813 ERGIC2Q96RQ1 377 aa20.74■□□□□ 0.91
CLK1-205ENST00000434813 EPC1Q9H2F5 836 aa20.74■□□□□ 0.91
CLK1-205ENST00000434813 SEMA6BQ9H3T3 888 aa20.74■□□□□ 0.91
CLK1-205ENST00000434813 GCFC2P16383 781 aaKnown RBP20.73■□□□□ 0.91
CLK1-205ENST00000434813 TRIM21P19474 475 aaKnown RBP20.73■□□□□ 0.91
CLK1-205ENST00000434813 MRPL12P52815 198 aaKnown RBP20.73■□□□□ 0.91
CLK1-205ENST00000434813 TUBB4BP68371 445 aa20.73■□□□□ 0.91
CLK1-205ENST00000434813 TBC1D8BQ0IIM8 1120 aa20.73■□□□□ 0.91
CLK1-205ENST00000434813 UBE2SQ16763 222 aa20.73■□□□□ 0.91
CLK1-205ENST00000434813 CCDC96Q2M329 555 aa20.73■□□□□ 0.91
CLK1-205ENST00000434813 TTBK2Q6IQ55 1244 aa20.73■□□□□ 0.91
CLK1-205ENST00000434813 CC2D1AQ6P1N0 951 aaPredicted RBP20.73■□□□□ 0.91
CLK1-205ENST00000434813 PODNQ7Z5L7 613 aa20.73■□□□□ 0.91
CLK1-205ENST00000434813 IQCDQ96DY2 449 aa20.73■□□□□ 0.91
CLK1-205ENST00000434813 CCDC17Q96LX7 622 aa20.73■□□□□ 0.91
CLK1-205ENST00000434813 LRRC27Q9C0I9 530 aa20.73■□□□□ 0.91
CLK1-205ENST00000434813 HAUS4Q9H6D7 363 aa20.73■□□□□ 0.91
CLK1-205ENST00000434813 ABCB11O95342 1321 aa20.73■□□□□ 0.91
CLK1-205ENST00000434813 A0A1W2PQJ5 194 aa20.73■□□□□ 0.91
CLK1-205ENST00000434813 RASSF10A6NK89 507 aa20.73■□□□□ 0.91
CLK1-205ENST00000434813 ZBED6P86452 979 aa20.73■□□□□ 0.91
CLK1-205ENST00000434813 ZNF662Q6ZS27 426 aa20.73■□□□□ 0.91
CLK1-205ENST00000434813 GUF1Q8N442 669 aaKnown RBP20.73■□□□□ 0.91
CLK1-205ENST00000434813 HPS3Q969F9 1004 aa20.73■□□□□ 0.91
CLK1-205ENST00000434813 NOC4LQ9BVI4 516 aaKnown RBP20.73■□□□□ 0.91
CLK1-205ENST00000434813 PARD6BQ9BYG5 372 aa20.73■□□□□ 0.91
CLK1-205ENST00000434813 PDGFDQ9GZP0 370 aaPredicted RBP20.73■□□□□ 0.91
CLK1-205ENST00000434813 SLC39A2Q9NP94 309 aa20.73■□□□□ 0.91
CLK1-205ENST00000434813 DDX25Q9UHL0 483 aaKnown RBP20.73■□□□□ 0.91
CLK1-205ENST00000434813 PRDM4Q9UKN5 801 aa20.73■□□□□ 0.91
CLK1-205ENST00000434813 MPHOSPH10O00566 681 aaKnown RBP20.72■□□□□ 0.91
CLK1-205ENST00000434813 EHHADHQ08426 723 aa20.72■□□□□ 0.91
CLK1-205ENST00000434813 NFIAQ12857 509 aa20.72■□□□□ 0.91
CLK1-205ENST00000434813 WHAMMP3Q1A5X7 153 aa20.72■□□□□ 0.91
CLK1-205ENST00000434813 NAP1L4Q99733 375 aaKnown RBP20.72■□□□□ 0.91
CLK1-205ENST00000434813 ARFGEF1Q9Y6D6 1849 aa20.72■□□□□ 0.91
CLK1-205ENST00000434813 MYH7BA7E2Y1 1941 aa20.72■□□□□ 0.91
CLK1-205ENST00000434813 HERVK_113P62684 666 aa20.71■□□□□ 0.91
CLK1-205ENST00000434813 FOXR2Q6PJQ5 311 aa20.71■□□□□ 0.91
CLK1-205ENST00000434813 EEF2KMTQ96G04 330 aa20.71■□□□□ 0.91
CLK1-205ENST00000434813 ZDHHC15Q96MV8 337 aa20.71■□□□□ 0.91
CLK1-205ENST00000434813 DBNDD1Q9H9R9 158 aa20.71■□□□□ 0.91
CLK1-205ENST00000434813 USP17L10C9JJH3 530 aa20.71■□□□□ 0.91
CLK1-205ENST00000434813 SEC31AO94979 1220 aaKnown RBP20.71■□□□□ 0.91
CLK1-205ENST00000434813 CRKP46108 304 aa20.71■□□□□ 0.91
CLK1-205ENST00000434813 KRT83P78385 493 aa20.71■□□□□ 0.91
CLK1-205ENST00000434813 AMPD2Q01433 879 aa20.71■□□□□ 0.91
CLK1-205ENST00000434813 LRRC63Q05C16 580 aa20.71■□□□□ 0.91
CLK1-205ENST00000434813 FKBP15Q5T1M5 1219 aa20.71■□□□□ 0.91
CLK1-205ENST00000434813 KCTD1Q719H9 257 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms