RNA–Protein interactions for RNA: ENST00000434233.2

LINC00339-204, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best)

Gene LINC00339, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-204ENST00000434233 ZNF792Q3KQV3 632 aa14.07□□□□□ -0.16
LINC00339-204ENST00000434233 BRAPQ7Z569 592 aa14.07□□□□□ -0.16
LINC00339-204ENST00000434233 DPP9Q86TI2 863 aa14.07□□□□□ -0.16
LINC00339-204ENST00000434233 NSUN6Q8TEA1 469 aaKnown RBP14.07□□□□□ -0.16
LINC00339-204ENST00000434233 ZNF296Q8WUU4 475 aaPredicted RBP14.07□□□□□ -0.16
LINC00339-204ENST00000434233 ANO3Q9BYT9 981 aa14.07□□□□□ -0.16
LINC00339-204ENST00000434233 ADD3Q9UEY8 706 aaKnown RBP14.07□□□□□ -0.16
LINC00339-204ENST00000434233 SOWAHBA6NEL2 793 aa14.06□□□□□ -0.16
LINC00339-204ENST00000434233 F13A1P00488 732 aa14.06□□□□□ -0.16
LINC00339-204ENST00000434233 PGK2P07205 417 aa14.06□□□□□ -0.16
LINC00339-204ENST00000434233 CYP3A4P08684 503 aa14.06□□□□□ -0.16
LINC00339-204ENST00000434233 HOXC6P09630 235 aa14.06□□□□□ -0.16
LINC00339-204ENST00000434233 USP11P51784 963 aa14.06□□□□□ -0.16
LINC00339-204ENST00000434233 CNTN2Q02246 1040 aa14.06□□□□□ -0.16
LINC00339-204ENST00000434233 RESTQ13127 1097 aa14.06□□□□□ -0.16
LINC00339-204ENST00000434233 EARS2Q5JPH6 523 aaKnown RBP14.06□□□□□ -0.16
LINC00339-204ENST00000434233 ARHGEF16Q5VV41 709 aa14.06□□□□□ -0.16
LINC00339-204ENST00000434233 PIK3AP1Q6ZUJ8 805 aa14.06□□□□□ -0.16
LINC00339-204ENST00000434233 ZNF467Q7Z7K2 595 aaPredicted RBP14.06□□□□□ -0.16
LINC00339-204ENST00000434233 CD99L2Q8TCZ2 262 aa14.06□□□□□ -0.16
LINC00339-204ENST00000434233 TBCKQ8TEA7 893 aa14.06□□□□□ -0.16
LINC00339-204ENST00000434233 SOCS4Q8WXH5 440 aa14.06□□□□□ -0.16
LINC00339-204ENST00000434233 TRIM47Q96LD4 638 aa14.06□□□□□ -0.16
LINC00339-204ENST00000434233 IWS1Q96ST2 819 aa14.06□□□□□ -0.16
LINC00339-204ENST00000434233 RMDN3Q96TC7 470 aa14.06□□□□□ -0.16
LINC00339-204ENST00000434233 ARHGAP39Q9C0H5 1083 aa14.06□□□□□ -0.16
LINC00339-204ENST00000434233 PXMP2Q9NR77 195 aa14.06□□□□□ -0.16
LINC00339-204ENST00000434233 RPTORQ8N122 1335 aa14.06□□□□□ -0.16
LINC00339-204ENST00000434233 SREBF1P36956 1147 aa14.05□□□□□ -0.16
LINC00339-204ENST00000434233 RGS2P41220 211 aa14.05□□□□□ -0.16
LINC00339-204ENST00000434233 TRAPPC10P48553 1259 aa14.05□□□□□ -0.16
LINC00339-204ENST00000434233 ALDH5A1P51649 535 aaPredicted RBP14.05□□□□□ -0.16
LINC00339-204ENST00000434233 XRRA1Q6P2D8 792 aa14.05□□□□□ -0.16
LINC00339-204ENST00000434233 FERMT3Q86UX7 667 aa14.05□□□□□ -0.16
LINC00339-204ENST00000434233 CRYGNQ8WXF5 182 aa14.05□□□□□ -0.16
LINC00339-204ENST00000434233 PGBD1Q96JS3 809 aa14.05□□□□□ -0.16
LINC00339-204ENST00000434233 PURBQ96QR8 312 aaKnown RBP14.05□□□□□ -0.16
LINC00339-204ENST00000434233 MPHOSPH6Q99547 160 aaKnown RBP14.05□□□□□ -0.16
LINC00339-204ENST00000434233 PDCD2LQ9BRP1 358 aa14.05□□□□□ -0.16
LINC00339-204ENST00000434233 ZNF236Q9UL36 1845 aa14.05□□□□□ -0.16
LINC00339-204ENST00000434233 FRMPD4Q14CM0 1322 aa14.05□□□□□ -0.16
LINC00339-204ENST00000434233 PLXNA1Q9UIW2 1896 aa14.05□□□□□ -0.16
LINC00339-204ENST00000434233 MYH7BA7E2Y1 1941 aa14.04□□□□□ -0.16
LINC00339-204ENST00000434233 LCTP09848 1927 aa14.04□□□□□ -0.16
LINC00339-204ENST00000434233 ASB14A6NK59 587 aa14.04□□□□□ -0.16
LINC00339-204ENST00000434233 ECM2O94769 699 aaPredicted RBP14.04□□□□□ -0.16
LINC00339-204ENST00000434233 NR3C2P08235 984 aa14.04□□□□□ -0.16
LINC00339-204ENST00000434233 XRCC5P13010 732 aaKnown RBP14.04□□□□□ -0.16
LINC00339-204ENST00000434233 PRMT2P55345 433 aa14.04□□□□□ -0.16
LINC00339-204ENST00000434233 ARHGAP4P98171 946 aa14.04□□□□□ -0.16
LINC00339-204ENST00000434233 PGM5Q15124 567 aa14.04□□□□□ -0.16
LINC00339-204ENST00000434233 INF2Q27J81 1249 aa14.04□□□□□ -0.16
LINC00339-204ENST00000434233 RILPL1Q5EBL4 403 aa14.04□□□□□ -0.16
LINC00339-204ENST00000434233 PCNX4Q63HM2 1172 aa14.04□□□□□ -0.16
LINC00339-204ENST00000434233 MAMDC4Q6UXC1 1216 aa14.04□□□□□ -0.16
LINC00339-204ENST00000434233 NEK8Q86SG6 692 aa14.04□□□□□ -0.16
LINC00339-204ENST00000434233 VSIG10LQ86VR7 867 aa14.04□□□□□ -0.16
LINC00339-204ENST00000434233 MSL3Q8N5Y2 521 aaKnown RBP14.04□□□□□ -0.16
LINC00339-204ENST00000434233 NPLOC4Q8TAT6 608 aa14.04□□□□□ -0.16
LINC00339-204ENST00000434233 MORC4Q8TE76 937 aa14.04□□□□□ -0.16
LINC00339-204ENST00000434233 FGD4Q96M96 766 aa14.04□□□□□ -0.16
LINC00339-204ENST00000434233 NAP1L4Q99733 375 aaKnown RBP14.04□□□□□ -0.16
LINC00339-204ENST00000434233 TSKSQ9UJT2 592 aa14.04□□□□□ -0.16
LINC00339-204ENST00000434233 NOL7Q9UMY1 257 aaKnown RBP14.04□□□□□ -0.16
LINC00339-204ENST00000434233 ATP6V1DQ9Y5K8 247 aa14.04□□□□□ -0.16
LINC00339-204ENST00000434233 CYP3A7-CYP3A51PA0A087WV96 503 aa14.03□□□□□ -0.16
LINC00339-204ENST00000434233 EDIL3O43854 480 aa14.03□□□□□ -0.16
LINC00339-204ENST00000434233 STAM2O75886 525 aa14.03□□□□□ -0.16
LINC00339-204ENST00000434233 EIF2AK2P19525 551 aaKnown RBP14.03□□□□□ -0.16
LINC00339-204ENST00000434233 CYP2B6P20813 491 aa14.03□□□□□ -0.16
LINC00339-204ENST00000434233 CYP3A7P24462 503 aa14.03□□□□□ -0.16
LINC00339-204ENST00000434233 EDNRBP24530 442 aa14.03□□□□□ -0.16
LINC00339-204ENST00000434233 CIITAP33076 1130 aa14.03□□□□□ -0.16
LINC00339-204ENST00000434233 CAP1Q01518 475 aa14.03□□□□□ -0.16
LINC00339-204ENST00000434233 STXBP2Q15833 593 aa14.03□□□□□ -0.16
LINC00339-204ENST00000434233 FOXD4L5Q5VV16 416 aaPredicted RBP14.03□□□□□ -0.16
LINC00339-204ENST00000434233 MYSM1Q5VVJ2 828 aa14.03□□□□□ -0.16
LINC00339-204ENST00000434233 MOXD1Q6UVY6 613 aa14.03□□□□□ -0.16
LINC00339-204ENST00000434233 FOXD4L4Q8WXT5 416 aaPredicted RBP14.03□□□□□ -0.16
LINC00339-204ENST00000434233 MAML3Q96JK9 1138 aa14.03□□□□□ -0.16
LINC00339-204ENST00000434233 SRRDQ9UH36 339 aa14.03□□□□□ -0.16
LINC00339-204ENST00000434233 GABRQQ9UN88 632 aa14.03□□□□□ -0.16
LINC00339-204ENST00000434233 ASTN1O14525 1302 aa14.02□□□□□ -0.17
LINC00339-204ENST00000434233 FAM205CA6NFA0 338 aa14.02□□□□□ -0.17
LINC00339-204ENST00000434233 CCND2P30279 289 aa14.02□□□□□ -0.17
LINC00339-204ENST00000434233 FLT3LGP49771 235 aa14.02□□□□□ -0.17
LINC00339-204ENST00000434233 TOB1P50616 345 aaPredicted RBP14.02□□□□□ -0.17
LINC00339-204ENST00000434233 IRF5Q13568 498 aa14.02□□□□□ -0.17
LINC00339-204ENST00000434233 ATL3Q6DD88 541 aa14.02□□□□□ -0.17
LINC00339-204ENST00000434233 PPP4R3AQ6IN85 833 aa14.02□□□□□ -0.17
LINC00339-204ENST00000434233 TRMT44Q8IYL2 757 aaKnown RBP14.02□□□□□ -0.17
LINC00339-204ENST00000434233 APBA2Q99767 749 aa14.02□□□□□ -0.17
LINC00339-204ENST00000434233 SYNGAP1Q96PV0 1343 aa14.01□□□□□ -0.17
LINC00339-204ENST00000434233 FOXN1O15353 648 aa14.01□□□□□ -0.17
LINC00339-204ENST00000434233 MAFGO15525 162 aa14.01□□□□□ -0.17
LINC00339-204ENST00000434233 EIF3JO75822 258 aaKnown RBP14.01□□□□□ -0.17
LINC00339-204ENST00000434233 IGHA2P01877 340 aa14.01□□□□□ -0.17
LINC00339-204ENST00000434233 HSPA1AP0DMV8 641 aaKnown RBP14.01□□□□□ -0.17
LINC00339-204ENST00000434233 HSPA1BP0DMV9 641 aaKnown RBP14.01□□□□□ -0.17
LINC00339-204ENST00000434233 HSPA8P11142 646 aaKnown RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms