RNA–Protein interactions for RNA: ENST00000434101.6

TRAPPC4-202, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 794 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-202ENST00000434101 LBHD1Q9BQE6 289 aaPredicted RBP15.29■□□□□ 0.04
TRAPPC4-202ENST00000434101 PRO3102Q9H379 93 aa15.29■□□□□ 0.04
TRAPPC4-202ENST00000434101 MYH7BA7E2Y1 1941 aa15.29■□□□□ 0.04
TRAPPC4-202ENST00000434101 MROH7Q68CQ1 1323 aa15.28■□□□□ 0.04
TRAPPC4-202ENST00000434101 GCOM1H8Y6P7 765 aaPredicted RBP15.28■□□□□ 0.04
TRAPPC4-202ENST00000434101 CTAGE5O15320 804 aa15.28■□□□□ 0.04
TRAPPC4-202ENST00000434101 CABYRO75952 493 aa15.28■□□□□ 0.04
TRAPPC4-202ENST00000434101 POLR2MP0CAP2 368 aa15.28■□□□□ 0.04
TRAPPC4-202ENST00000434101 BMP8BP34820 402 aa15.28■□□□□ 0.04
TRAPPC4-202ENST00000434101 MAGEA10P43363 369 aaPredicted RBP15.28■□□□□ 0.04
TRAPPC4-202ENST00000434101 FGD1P98174 961 aa15.28■□□□□ 0.04
TRAPPC4-202ENST00000434101 EXOSC10Q01780 885 aaKnown RBP15.28■□□□□ 0.04
TRAPPC4-202ENST00000434101 COL9A3Q14050 684 aaPredicted RBP15.28■□□□□ 0.04
TRAPPC4-202ENST00000434101 TTLL4Q14679 1199 aa15.28■□□□□ 0.04
TRAPPC4-202ENST00000434101 PPP2R5BQ15173 497 aa15.28■□□□□ 0.04
TRAPPC4-202ENST00000434101 STXBP2Q15833 593 aa15.28■□□□□ 0.04
TRAPPC4-202ENST00000434101 ADCK5Q3MIX3 580 aa15.28■□□□□ 0.04
TRAPPC4-202ENST00000434101 MICU3Q86XE3 530 aa15.28■□□□□ 0.04
TRAPPC4-202ENST00000434101 FANCBQ8NB91 859 aa15.28■□□□□ 0.04
TRAPPC4-202ENST00000434101 PIBF1Q8WXW3 757 aa15.28■□□□□ 0.04
TRAPPC4-202ENST00000434101 COL20A1Q9P218 1284 aa15.28■□□□□ 0.04
TRAPPC4-202ENST00000434101 LTBP2Q14767 1821 aa15.28■□□□□ 0.04
TRAPPC4-202ENST00000434101 A0A0U1RQG5 324 aaPredicted RBP15.27■□□□□ 0.04
TRAPPC4-202ENST00000434101 DCDC2CA8MYV0 355 aa15.27■□□□□ 0.04
TRAPPC4-202ENST00000434101 OPLAHO14841 1288 aa15.27■□□□□ 0.04
TRAPPC4-202ENST00000434101 RXRAP19793 462 aa15.27■□□□□ 0.04
TRAPPC4-202ENST00000434101 IRX5P78411 483 aaPredicted RBP15.27■□□□□ 0.04
TRAPPC4-202ENST00000434101 BEX3Q00994 111 aa15.27■□□□□ 0.04
TRAPPC4-202ENST00000434101 TLE2Q04725 743 aa15.27■□□□□ 0.04
TRAPPC4-202ENST00000434101 BRDTQ58F21 947 aaPredicted RBP15.27■□□□□ 0.04
TRAPPC4-202ENST00000434101 APOA5Q6Q788 366 aa15.27■□□□□ 0.04
TRAPPC4-202ENST00000434101 TOX2Q96NM4 488 aa15.27■□□□□ 0.04
TRAPPC4-202ENST00000434101 PRDM5Q9NQX1 630 aaPredicted RBP15.27■□□□□ 0.04
TRAPPC4-202ENST00000434101 PXMP2Q9NR77 195 aa15.27■□□□□ 0.04
TRAPPC4-202ENST00000434101 RBM28Q9NW13 759 aaKnown RBP15.27■□□□□ 0.04
TRAPPC4-202ENST00000434101 PQBP1O60828 265 aaKnown RBP15.26■□□□□ 0.03
TRAPPC4-202ENST00000434101 PLEKHA8P1O95397 391 aa15.26■□□□□ 0.03
TRAPPC4-202ENST00000434101 NR3C2P08235 984 aa15.26■□□□□ 0.03
TRAPPC4-202ENST00000434101 CLTBP09497 229 aa15.26■□□□□ 0.03
TRAPPC4-202ENST00000434101 EIF2AK2P19525 551 aaKnown RBP15.26■□□□□ 0.03
TRAPPC4-202ENST00000434101 PSMA5P28066 241 aa15.26■□□□□ 0.03
TRAPPC4-202ENST00000434101 CPT1AP50416 773 aa15.26■□□□□ 0.03
TRAPPC4-202ENST00000434101 BLOC1S2Q6QNY1 142 aa15.26■□□□□ 0.03
TRAPPC4-202ENST00000434101 TMTC3Q6ZXV5 915 aa15.26■□□□□ 0.03
TRAPPC4-202ENST00000434101 ANKRD33Q7Z3H0 272 aa15.26■□□□□ 0.03
TRAPPC4-202ENST00000434101 SRBD1Q8N5C6 995 aaKnown RBP15.26■□□□□ 0.03
TRAPPC4-202ENST00000434101 OR6J1Q8NGC5 347 aa15.26■□□□□ 0.03
TRAPPC4-202ENST00000434101 TCEANC2Q96MN5 208 aa15.26■□□□□ 0.03
TRAPPC4-202ENST00000434101 JAKMIP1Q96N16 626 aaKnown RBP15.26■□□□□ 0.03
TRAPPC4-202ENST00000434101 SEZ6LQ9BYH1 1024 aa15.26■□□□□ 0.03
TRAPPC4-202ENST00000434101 UBE2OQ9C0C9 1292 aaKnown RBP15.26■□□□□ 0.03
TRAPPC4-202ENST00000434101 PDLIM7Q9NR12 457 aa15.26■□□□□ 0.03
TRAPPC4-202ENST00000434101 POLR3EQ9NVU0 708 aa15.26■□□□□ 0.03
TRAPPC4-202ENST00000434101 SNX14Q9Y5W7 946 aa15.26■□□□□ 0.03
TRAPPC4-202ENST00000434101 ARVCFO00192 962 aa15.25■□□□□ 0.03
TRAPPC4-202ENST00000434101 ZBTB43O43298 467 aa15.25■□□□□ 0.03
TRAPPC4-202ENST00000434101 EIF3JO75822 258 aaKnown RBP15.25■□□□□ 0.03
TRAPPC4-202ENST00000434101 TXNP10599 105 aaKnown RBP15.25■□□□□ 0.03
TRAPPC4-202ENST00000434101 HOXA13P31271 388 aaPredicted RBP15.25■□□□□ 0.03
TRAPPC4-202ENST00000434101 RCAN1P53805 252 aa15.25■□□□□ 0.03
TRAPPC4-202ENST00000434101 MDM2Q00987 491 aaPredicted RBP15.25■□□□□ 0.03
TRAPPC4-202ENST00000434101 RTN1Q16799 776 aa15.25■□□□□ 0.03
TRAPPC4-202ENST00000434101 CXCL17Q6UXB2 119 aa15.25■□□□□ 0.03
TRAPPC4-202ENST00000434101 SEPT14Q6ZU15 432 aa15.25■□□□□ 0.03
TRAPPC4-202ENST00000434101 RAB11FIP4Q86YS3 637 aa15.25■□□□□ 0.03
TRAPPC4-202ENST00000434101 CUL5Q93034 780 aa15.25■□□□□ 0.03
TRAPPC4-202ENST00000434101 PDCD2LQ9BRP1 358 aa15.25■□□□□ 0.03
TRAPPC4-202ENST00000434101 SCN10AQ9Y5Y9 1956 aa15.24■□□□□ 0.03
TRAPPC4-202ENST00000434101 KLF18A0A0U1RQI7 1052 aa15.24■□□□□ 0.03
TRAPPC4-202ENST00000434101 TLR3O15455 904 aaKnown RBP15.24■□□□□ 0.03
TRAPPC4-202ENST00000434101 TMEM63BQ5T3F8 832 aa15.24■□□□□ 0.03
TRAPPC4-202ENST00000434101 FCHSD1Q86WN1 690 aa15.24■□□□□ 0.03
TRAPPC4-202ENST00000434101 CMTR1Q8N1G2 835 aaKnown RBP15.24■□□□□ 0.03
TRAPPC4-202ENST00000434101 BRPF3Q9ULD4 1205 aa15.24■□□□□ 0.03
TRAPPC4-202ENST00000434101 GOLGA8AA7E2F4 631 aa15.23■□□□□ 0.03
TRAPPC4-202ENST00000434101 GOLGA8BA8MQT2 603 aa15.23■□□□□ 0.03
TRAPPC4-202ENST00000434101 KPNA6O60684 536 aa15.23■□□□□ 0.03
TRAPPC4-202ENST00000434101 GH1P01241 217 aa15.23■□□□□ 0.03
TRAPPC4-202ENST00000434101 MYCLP12524 364 aaPredicted RBP15.23■□□□□ 0.03
TRAPPC4-202ENST00000434101 PTGS1P23219 599 aa15.23■□□□□ 0.03
TRAPPC4-202ENST00000434101 CCND2P30279 289 aa15.23■□□□□ 0.03
TRAPPC4-202ENST00000434101 CDK7P50613 346 aa15.23■□□□□ 0.03
TRAPPC4-202ENST00000434101 FXR1P51114 621 aaKnown RBP eCLIP15.23■□□□□ 0.03
TRAPPC4-202ENST00000434101 PGM5Q15124 567 aa15.23■□□□□ 0.03
TRAPPC4-202ENST00000434101 CCDC62Q6P9F0 684 aa15.23■□□□□ 0.03
TRAPPC4-202ENST00000434101 KCNV1Q6PIU1 500 aa15.23■□□□□ 0.03
TRAPPC4-202ENST00000434101 CCDC82Q8N4S0 544 aa15.23■□□□□ 0.03
TRAPPC4-202ENST00000434101 SMARCC2Q8TAQ2 1214 aa15.23■□□□□ 0.03
TRAPPC4-202ENST00000434101 TMEM39AQ9NV64 488 aa15.23■□□□□ 0.03
TRAPPC4-202ENST00000434101 NAP1L2Q9ULW6 460 aaPredicted RBP15.23■□□□□ 0.03
TRAPPC4-202ENST00000434101 CCDC196A0A1B0GTZ2 297 aa15.22■□□□□ 0.03
TRAPPC4-202ENST00000434101 PIK3CDO00329 1044 aa15.22■□□□□ 0.03
TRAPPC4-202ENST00000434101 KIAA0355O15063 1070 aa15.22■□□□□ 0.03
TRAPPC4-202ENST00000434101 ARIH2O95376 493 aa15.22■□□□□ 0.03
TRAPPC4-202ENST00000434101 MYL3P08590 195 aa15.22■□□□□ 0.03
TRAPPC4-202ENST00000434101 RAG1P15918 1043 aa15.22■□□□□ 0.03
TRAPPC4-202ENST00000434101 CASTP20810 708 aaKnown RBP15.22■□□□□ 0.03
TRAPPC4-202ENST00000434101 RPS6KB1P23443 525 aa15.22■□□□□ 0.03
TRAPPC4-202ENST00000434101 FAAP100Q0VG06 881 aa15.22■□□□□ 0.03
TRAPPC4-202ENST00000434101 ITGA7Q13683 1181 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms