RNA–Protein interactions for RNA: ENST00000433555.1

RPUSD3-207, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-207ENST00000433555 PDE4DQ08499 809 aa21.83■■□□□ 1.09
RPUSD3-207ENST00000433555 TRAF1Q13077 416 aa21.83■■□□□ 1.09
RPUSD3-207ENST00000433555 NTRK3Q16288 839 aa21.83■■□□□ 1.09
RPUSD3-207ENST00000433555 NECAB2Q7Z6G3 386 aa21.83■■□□□ 1.09
RPUSD3-207ENST00000433555 GNEQ9Y223 722 aaKnown RBP21.83■■□□□ 1.09
RPUSD3-207ENST00000433555 FRMPD4Q14CM0 1322 aa21.82■■□□□ 1.08
RPUSD3-207ENST00000433555 CTAGE5O15320 804 aa21.82■■□□□ 1.08
RPUSD3-207ENST00000433555 DUSP11O75319 330 aaKnown RBP21.82■■□□□ 1.08
RPUSD3-207ENST00000433555 AK2P54819 239 aa21.82■■□□□ 1.08
RPUSD3-207ENST00000433555 USP17L6PQ6QN14 398 aa21.82■■□□□ 1.08
RPUSD3-207ENST00000433555 FCHSD1Q86WN1 690 aa21.82■■□□□ 1.08
RPUSD3-207ENST00000433555 NSUN6Q8TEA1 469 aaKnown RBP21.82■■□□□ 1.08
RPUSD3-207ENST00000433555 PHKBQ93100 1093 aa21.82■■□□□ 1.08
RPUSD3-207ENST00000433555 UPF3AQ9H1J1 476 aaKnown RBP21.82■■□□□ 1.08
RPUSD3-207ENST00000433555 V9GY48 417 aaPredicted RBP21.82■■□□□ 1.08
RPUSD3-207ENST00000433555 RBM47A0AV96 593 aaKnown RBP21.81■■□□□ 1.08
RPUSD3-207ENST00000433555 STXBP3O00186 592 aa21.81■■□□□ 1.08
RPUSD3-207ENST00000433555 MEIS2O14770 477 aa21.81■■□□□ 1.08
RPUSD3-207ENST00000433555 EIF5BO60841 1220 aaKnown RBP21.81■■□□□ 1.08
RPUSD3-207ENST00000433555 TNFAIP2Q03169 654 aa21.81■■□□□ 1.08
RPUSD3-207ENST00000433555 STK3Q13188 491 aa21.81■■□□□ 1.08
RPUSD3-207ENST00000433555 UBE2SQ16763 222 aa21.81■■□□□ 1.08
RPUSD3-207ENST00000433555 ARHGEF16Q5VV41 709 aa21.81■■□□□ 1.08
RPUSD3-207ENST00000433555 KIF2CQ99661 725 aa21.81■■□□□ 1.08
RPUSD3-207ENST00000433555 PDCD2LQ9BRP1 358 aa21.81■■□□□ 1.08
RPUSD3-207ENST00000433555 MAP3K20Q9NYL2 800 aaKnown RBP21.81■■□□□ 1.08
RPUSD3-207ENST00000433555 TPCN1Q9ULQ1 816 aa21.81■■□□□ 1.08
RPUSD3-207ENST00000433555 ARIH2O95376 493 aa21.8■■□□□ 1.08
RPUSD3-207ENST00000433555 LARGE1O95461 756 aa21.8■■□□□ 1.08
RPUSD3-207ENST00000433555 PGM5Q15124 567 aa21.8■■□□□ 1.08
RPUSD3-207ENST00000433555 PKN1Q16512 942 aa21.8■■□□□ 1.08
RPUSD3-207ENST00000433555 TLK2Q86UE8 772 aa21.8■■□□□ 1.08
RPUSD3-207ENST00000433555 SAMD3Q8N6K7 520 aa21.8■■□□□ 1.08
RPUSD3-207ENST00000433555 ARRDC4Q8NCT1 418 aa21.8■■□□□ 1.08
RPUSD3-207ENST00000433555 KLHDC9Q8NEP7 349 aa21.8■■□□□ 1.08
RPUSD3-207ENST00000433555 ZNF274Q96GC6 653 aaPredicted RBP21.8■■□□□ 1.08
RPUSD3-207ENST00000433555 ZFP91Q96JP5 570 aaPredicted RBP21.8■■□□□ 1.08
RPUSD3-207ENST00000433555 ALDH8A1Q9H2A2 487 aaPredicted RBP21.8■■□□□ 1.08
RPUSD3-207ENST00000433555 MYH7BA7E2Y1 1941 aa21.8■■□□□ 1.08
RPUSD3-207ENST00000433555 CCDC196A0A1B0GTZ2 297 aa21.79■■□□□ 1.08
RPUSD3-207ENST00000433555 KBTBD13C9JR72 458 aa21.79■■□□□ 1.08
RPUSD3-207ENST00000433555 PIK3CDO00329 1044 aa21.79■■□□□ 1.08
RPUSD3-207ENST00000433555 DTNBO60941 627 aa21.79■■□□□ 1.08
RPUSD3-207ENST00000433555 GJA9P57773 515 aa21.79■■□□□ 1.08
RPUSD3-207ENST00000433555 PPP2R5BQ15173 497 aa21.79■■□□□ 1.08
RPUSD3-207ENST00000433555 CCSAPQ6IQ19 270 aaPredicted RBP21.79■■□□□ 1.08
RPUSD3-207ENST00000433555 NOL8Q76FK4 1167 aaKnown RBP21.79■■□□□ 1.08
RPUSD3-207ENST00000433555 ADAMTS3O15072 1205 aa21.78■■□□□ 1.08
RPUSD3-207ENST00000433555 NR3C2P08235 984 aa21.78■■□□□ 1.08
RPUSD3-207ENST00000433555 IFNAR1P17181 557 aa21.78■■□□□ 1.08
RPUSD3-207ENST00000433555 CST5P28325 142 aaPredicted RBP21.78■■□□□ 1.08
RPUSD3-207ENST00000433555 NAPAP54920 295 aa21.78■■□□□ 1.08
RPUSD3-207ENST00000433555 BEX3Q00994 111 aa21.78■■□□□ 1.08
RPUSD3-207ENST00000433555 SCRN1Q12765 414 aa21.78■■□□□ 1.08
RPUSD3-207ENST00000433555 PFKFB3Q16875 520 aaPredicted RBP21.78■■□□□ 1.08
RPUSD3-207ENST00000433555 LRRC26Q2I0M4 334 aa21.78■■□□□ 1.08
RPUSD3-207ENST00000433555 PPP1R18Q6NYC8 613 aa21.78■■□□□ 1.08
RPUSD3-207ENST00000433555 COPS5Q92905 334 aa21.78■■□□□ 1.08
RPUSD3-207ENST00000433555 IWS1Q96ST2 819 aa21.78■■□□□ 1.08
RPUSD3-207ENST00000433555 MPHOSPH6Q99547 160 aaKnown RBP21.78■■□□□ 1.08
RPUSD3-207ENST00000433555 HTATIP2Q9BUP3 242 aa21.78■■□□□ 1.08
RPUSD3-207ENST00000433555 WDR11Q9BZH6 1224 aa21.78■■□□□ 1.08
RPUSD3-207ENST00000433555 SENP6Q9GZR1 1112 aaPredicted RBP21.78■■□□□ 1.08
RPUSD3-207ENST00000433555 PCDH10Q9P2E7 1040 aa21.78■■□□□ 1.08
RPUSD3-207ENST00000433555 PHF24Q9UPV7 400 aa21.78■■□□□ 1.08
RPUSD3-207ENST00000433555 LTBP2Q14767 1821 aa21.78■■□□□ 1.08
RPUSD3-207ENST00000433555 PRPF3O43395 683 aaKnown RBP21.77■■□□□ 1.08
RPUSD3-207ENST00000433555 RGS20O76081 388 aa21.77■■□□□ 1.08
RPUSD3-207ENST00000433555 C6orf222P0C671 652 aaPredicted RBP21.77■■□□□ 1.08
RPUSD3-207ENST00000433555 MYCLP12524 364 aaPredicted RBP21.77■■□□□ 1.08
RPUSD3-207ENST00000433555 SCG2P13521 617 aa21.77■■□□□ 1.08
RPUSD3-207ENST00000433555 NKX3-2P78367 333 aa21.77■■□□□ 1.08
RPUSD3-207ENST00000433555 DUSP28Q4G0W2 176 aa21.77■■□□□ 1.08
RPUSD3-207ENST00000433555 IQSEC1Q6DN90 963 aa21.77■■□□□ 1.08
RPUSD3-207ENST00000433555 RNF180Q86T96 592 aa21.77■■□□□ 1.08
RPUSD3-207ENST00000433555 SMARCC2Q8TAQ2 1214 aa21.77■■□□□ 1.08
RPUSD3-207ENST00000433555 FERMT2Q96AC1 680 aa21.77■■□□□ 1.08
RPUSD3-207ENST00000433555 SLC26A6Q9BXS9 759 aa21.77■■□□□ 1.08
RPUSD3-207ENST00000433555 PSTPIP2Q9H939 334 aa21.77■■□□□ 1.08
RPUSD3-207ENST00000433555 BARHL2Q9NY43 387 aa21.77■■□□□ 1.08
RPUSD3-207ENST00000433555 NEK4P51957 841 aa21.76■■□□□ 1.07
RPUSD3-207ENST00000433555 ATN1P54259 1190 aaPredicted RBP21.76■■□□□ 1.07
RPUSD3-207ENST00000433555 STXBP2Q15833 593 aa21.76■■□□□ 1.07
RPUSD3-207ENST00000433555 SEPT14Q6ZU15 432 aa21.76■■□□□ 1.07
RPUSD3-207ENST00000433555 SCFD2Q8WU76 684 aa21.76■■□□□ 1.07
RPUSD3-207ENST00000433555 RNF26Q9BY78 433 aaPredicted RBP21.76■■□□□ 1.07
RPUSD3-207ENST00000433555 C22orf23Q9BZE7 217 aa21.76■■□□□ 1.07
RPUSD3-207ENST00000433555 A0A1W2PQ45 241 aaPredicted RBP21.75■■□□□ 1.07
RPUSD3-207ENST00000433555 A0A1W2PQY0 241 aa21.75■■□□□ 1.07
RPUSD3-207ENST00000433555 B4DLN1 442 aa21.75■■□□□ 1.07
RPUSD3-207ENST00000433555 hCG_1984214I3L0E3 225 aa21.75■■□□□ 1.07
RPUSD3-207ENST00000433555 RBM25P49756 843 aaKnown RBP21.75■■□□□ 1.07
RPUSD3-207ENST00000433555 MRPL12P52815 198 aaKnown RBP21.75■■□□□ 1.07
RPUSD3-207ENST00000433555 MRPS9P82933 396 aaKnown RBP21.75■■□□□ 1.07
RPUSD3-207ENST00000433555 ST3GAL1Q11201 340 aa21.75■■□□□ 1.07
RPUSD3-207ENST00000433555 CCDC62Q6P9F0 684 aa21.75■■□□□ 1.07
RPUSD3-207ENST00000433555 ZNF713Q8N859 430 aaPredicted RBP21.75■■□□□ 1.07
RPUSD3-207ENST00000433555 DPF3Q92784 378 aa21.75■■□□□ 1.07
RPUSD3-207ENST00000433555 CUL5Q93034 780 aa21.75■■□□□ 1.07
RPUSD3-207ENST00000433555 PGBD1Q96JS3 809 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms