RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 NPLOC4Q8TAT6 608 aa5.35□□□□□ -1.55
CLK1-204ENST00000432425 PEX11GQ96HA9 241 aa5.35□□□□□ -1.55
CLK1-204ENST00000432425 MTA3Q9BTC8 594 aa5.35□□□□□ -1.55
CLK1-204ENST00000432425 BTG4Q9NY30 223 aa5.35□□□□□ -1.55
CLK1-204ENST00000432425 HCFC2Q9Y5Z7 792 aa5.35□□□□□ -1.55
CLK1-204ENST00000432425 KCNAB2Q13303 367 aa5.34□□□□□ -1.55
CLK1-204ENST00000432425 FBLN7Q53RD9 439 aa5.34□□□□□ -1.55
CLK1-204ENST00000432425 CKAP2LQ8IYA6 745 aa5.34□□□□□ -1.55
CLK1-204ENST00000432425 ALG3Q92685 438 aa5.34□□□□□ -1.55
CLK1-204ENST00000432425 DIO2Q92813 273 aa5.34□□□□□ -1.55
CLK1-204ENST00000432425 RXFP1Q9HBX9 757 aa5.34□□□□□ -1.55
CLK1-204ENST00000432425 MARCH2Q9P0N8 246 aa5.34□□□□□ -1.55
CLK1-204ENST00000432425 PPP1R1BQ9UD71 204 aaPredicted RBP5.34□□□□□ -1.55
CLK1-204ENST00000432425 U2SURPO15042 1029 aaKnown RBP5.34□□□□□ -1.56
CLK1-204ENST00000432425 MYO1BO43795 1136 aa5.34□□□□□ -1.56
CLK1-204ENST00000432425 PPP1R11O60927 126 aaPredicted RBP5.34□□□□□ -1.56
CLK1-204ENST00000432425 SCG5P05408 212 aa5.34□□□□□ -1.56
CLK1-204ENST00000432425 RPL11P62913 178 aaKnown RBP5.34□□□□□ -1.56
CLK1-204ENST00000432425 INF2Q27J81 1249 aa5.34□□□□□ -1.56
CLK1-204ENST00000432425 CNKSR3Q6P9H4 555 aa5.34□□□□□ -1.56
CLK1-204ENST00000432425 PPIL6Q8IXY8 311 aa5.34□□□□□ -1.56
CLK1-204ENST00000432425 TMEFF1Q8IYR6 380 aa5.34□□□□□ -1.56
CLK1-204ENST00000432425 TANGO6Q9C0B7 1094 aa5.34□□□□□ -1.56
CLK1-204ENST00000432425 FBLN5Q9UBX5 448 aa5.34□□□□□ -1.56
CLK1-204ENST00000432425 TIMM13Q9Y5L4 95 aaPredicted RBP5.34□□□□□ -1.56
CLK1-204ENST00000432425 ADAMTS20P59510 1910 aa5.33□□□□□ -1.56
CLK1-204ENST00000432425 IRS2Q9Y4H2 1338 aa5.33□□□□□ -1.56
CLK1-204ENST00000432425 IQCA1LA6NCM1 817 aa5.33□□□□□ -1.56
CLK1-204ENST00000432425 ATP2B1P20020 1258 aa5.33□□□□□ -1.56
CLK1-204ENST00000432425 AFF3P51826 1226 aaKnown RBP5.33□□□□□ -1.56
CLK1-204ENST00000432425 GFRA1P56159 465 aa5.33□□□□□ -1.56
CLK1-204ENST00000432425 CYP4F3Q08477 520 aa5.33□□□□□ -1.56
CLK1-204ENST00000432425 RAB33AQ14088 237 aa5.33□□□□□ -1.56
CLK1-204ENST00000432425 SLC9A5Q14940 896 aa5.33□□□□□ -1.56
CLK1-204ENST00000432425 PRSS53Q2L4Q9 553 aa5.33□□□□□ -1.56
CLK1-204ENST00000432425 ACBD5Q5T8D3 534 aaPredicted RBP5.33□□□□□ -1.56
CLK1-204ENST00000432425 DCP2Q8IU60 420 aaKnown RBP5.33□□□□□ -1.56
CLK1-204ENST00000432425 PANK1Q8TE04 598 aa5.33□□□□□ -1.56
CLK1-204ENST00000432425 TSPAN17Q96FV3 270 aa5.33□□□□□ -1.56
CLK1-204ENST00000432425 FAN1Q9Y2M0 1017 aa5.33□□□□□ -1.56
CLK1-204ENST00000432425 ZBTB7AO95365 584 aa5.32□□□□□ -1.56
CLK1-204ENST00000432425 NTRK1P04629 796 aa5.32□□□□□ -1.56
CLK1-204ENST00000432425 NCAM1P13591 858 aa5.32□□□□□ -1.56
CLK1-204ENST00000432425 GTF2A2P52657 109 aa5.32□□□□□ -1.56
CLK1-204ENST00000432425 PPP2R2AP63151 447 aa5.32□□□□□ -1.56
CLK1-204ENST00000432425 SF1Q15637 639 aaKnown RBP5.32□□□□□ -1.56
CLK1-204ENST00000432425 FAM129CQ86XR2 697 aa5.32□□□□□ -1.56
CLK1-204ENST00000432425 TEX2Q8IWB9 1127 aa5.32□□□□□ -1.56
CLK1-204ENST00000432425 NLGN1Q8N2Q7 840 aa5.32□□□□□ -1.56
CLK1-204ENST00000432425 DPF3Q92784 378 aa5.32□□□□□ -1.56
CLK1-204ENST00000432425 C8orf37Q96NL8 207 aa5.32□□□□□ -1.56
CLK1-204ENST00000432425 RNF38Q9H0F5 515 aa5.32□□□□□ -1.56
CLK1-204ENST00000432425 AP5M1Q9H0R1 490 aa5.32□□□□□ -1.56
CLK1-204ENST00000432425 A0A1W2PQU0 124 aa5.31□□□□□ -1.56
CLK1-204ENST00000432425 C22orf46C9J442 243 aa5.31□□□□□ -1.56
CLK1-204ENST00000432425 LIMS1P48059 325 aa5.31□□□□□ -1.56
CLK1-204ENST00000432425 HSP90AA2PQ14568 343 aaPredicted RBP5.31□□□□□ -1.56
CLK1-204ENST00000432425 TMEM145Q8NBT3 493 aa5.31□□□□□ -1.56
CLK1-204ENST00000432425 KREMEN2Q8NCW0 462 aa5.31□□□□□ -1.56
CLK1-204ENST00000432425 PLEKHO2Q8TD55 490 aa5.31□□□□□ -1.56
CLK1-204ENST00000432425 KCTD13Q8WZ19 329 aa5.31□□□□□ -1.56
CLK1-204ENST00000432425 DACT3Q96B18 629 aaPredicted RBP5.31□□□□□ -1.56
CLK1-204ENST00000432425 TRMT2BQ96GJ1 504 aaKnown RBP5.31□□□□□ -1.56
CLK1-204ENST00000432425 SGSM3Q96HU1 749 aa5.31□□□□□ -1.56
CLK1-204ENST00000432425 PWWP2AQ96N64 755 aa5.31□□□□□ -1.56
CLK1-204ENST00000432425 EPB41L4AQ9HCS5 686 aaPredicted RBP5.31□□□□□ -1.56
CLK1-204ENST00000432425 TMEFF2Q9UIK5 374 aaPredicted RBP5.31□□□□□ -1.56
CLK1-204ENST00000432425 ASGR2P07307 311 aa5.31□□□□□ -1.56
CLK1-204ENST00000432425 FBLN1P23142 703 aa5.31□□□□□ -1.56
CLK1-204ENST00000432425 IGFBP6P24592 240 aaPredicted RBP5.31□□□□□ -1.56
CLK1-204ENST00000432425 LTBRP36941 435 aa5.31□□□□□ -1.56
CLK1-204ENST00000432425 CCDC103Q8IW40 242 aa5.31□□□□□ -1.56
CLK1-204ENST00000432425 ST13P5Q8NFI4 369 aaPredicted RBP5.31□□□□□ -1.56
CLK1-204ENST00000432425 CHAMP1Q96JM3 812 aa5.31□□□□□ -1.56
CLK1-204ENST00000432425 IER2Q9BTL4 223 aa5.31□□□□□ -1.56
CLK1-204ENST00000432425 BCAS3Q9H6U6 928 aa5.31□□□□□ -1.56
CLK1-204ENST00000432425 PLA2G2DQ9UNK4 145 aa5.31□□□□□ -1.56
CLK1-204ENST00000432425 COA3Q9Y2R0 106 aaPredicted RBP5.31□□□□□ -1.56
CLK1-204ENST00000432425 FPR2P25090 351 aa5.3□□□□□ -1.56
CLK1-204ENST00000432425 PMLP29590 882 aa5.3□□□□□ -1.56
CLK1-204ENST00000432425 BCL6P41182 706 aa5.3□□□□□ -1.56
CLK1-204ENST00000432425 GRIA2P42262 883 aa5.3□□□□□ -1.56
CLK1-204ENST00000432425 MAP4K2Q12851 820 aa5.3□□□□□ -1.56
CLK1-204ENST00000432425 TESK1Q15569 626 aa5.3□□□□□ -1.56
CLK1-204ENST00000432425 MROH9Q5TGP6 573 aa5.3□□□□□ -1.56
CLK1-204ENST00000432425 CEP68Q76N32 757 aa5.3□□□□□ -1.56
CLK1-204ENST00000432425 TMEM169Q96HH4 297 aa5.3□□□□□ -1.56
CLK1-204ENST00000432425 AARSD1Q9BTE6 412 aaKnown RBP5.3□□□□□ -1.56
CLK1-204ENST00000432425 SIT1Q9Y3P8 196 aa5.3□□□□□ -1.56
CLK1-204ENST00000432425 ATF2P15336 505 aa5.29□□□□□ -1.56
CLK1-204ENST00000432425 BMP7P18075 431 aa5.29□□□□□ -1.56
CLK1-204ENST00000432425 GTF2F1P35269 517 aaKnown RBP eCLIP5.29□□□□□ -1.56
CLK1-204ENST00000432425 FOXO4P98177 505 aa5.29□□□□□ -1.56
CLK1-204ENST00000432425 SLC35F1Q5T1Q4 408 aa5.29□□□□□ -1.56
CLK1-204ENST00000432425 RIOX2Q8IUF8 465 aa5.29□□□□□ -1.56
CLK1-204ENST00000432425 LRRC47Q8N1G4 583 aaKnown RBP5.29□□□□□ -1.56
CLK1-204ENST00000432425 RCBTB1Q8NDN9 531 aa5.29□□□□□ -1.56
CLK1-204ENST00000432425 SEC14L1Q92503 715 aa5.29□□□□□ -1.56
CLK1-204ENST00000432425 C1orf159Q96HA4 380 aa5.29□□□□□ -1.56
CLK1-204ENST00000432425 PCDHA2Q9Y5H9 948 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms