RNA–Protein interactions for RNA: ENST00000432213.1

SEC13-212, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 594 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-212ENST00000432213 TAAR1Q96RJ0 339 aa16.68■□□□□ 0.26
SEC13-212ENST00000432213 ADD3Q9UEY8 706 aaKnown RBP16.68■□□□□ 0.26
SEC13-212ENST00000432213 PRRC2BQ5JSZ5 2229 aaKnown RBP16.68■□□□□ 0.26
SEC13-212ENST00000432213 PPP1R11O60927 126 aaPredicted RBP16.67■□□□□ 0.26
SEC13-212ENST00000432213 PDE4DQ08499 809 aa16.67■□□□□ 0.26
SEC13-212ENST00000432213 PPP2R5BQ15173 497 aa16.67■□□□□ 0.26
SEC13-212ENST00000432213 KRT40Q6A162 431 aa16.67■□□□□ 0.26
SEC13-212ENST00000432213 CCDC62Q6P9F0 684 aa16.67■□□□□ 0.26
SEC13-212ENST00000432213 TMCO2Q7Z6W1 182 aaPredicted RBP16.67■□□□□ 0.26
SEC13-212ENST00000432213 ADGRF4Q8IZF3 695 aa16.67■□□□□ 0.26
SEC13-212ENST00000432213 ENAHQ8N8S7 591 aaPredicted RBP16.67■□□□□ 0.26
SEC13-212ENST00000432213 EXOC6Q8TAG9 804 aa16.67■□□□□ 0.26
SEC13-212ENST00000432213 MTG1Q9BT17 334 aaPredicted RBP16.67■□□□□ 0.26
SEC13-212ENST00000432213 A6NJR5 290 aa16.66■□□□□ 0.26
SEC13-212ENST00000432213 ZBBXA8MT70 800 aa16.66■□□□□ 0.26
SEC13-212ENST00000432213 TXNP10599 105 aaKnown RBP16.66■□□□□ 0.26
SEC13-212ENST00000432213 IGFBP4P22692 258 aa16.66■□□□□ 0.26
SEC13-212ENST00000432213 NUCB1Q02818 461 aa16.66■□□□□ 0.26
SEC13-212ENST00000432213 ARHGAP1Q07960 439 aa16.66■□□□□ 0.26
SEC13-212ENST00000432213 RAB30Q15771 203 aa16.66■□□□□ 0.26
SEC13-212ENST00000432213 LY6KQ17RY6 165 aa16.66■□□□□ 0.26
SEC13-212ENST00000432213 QRICH1Q2TAL8 776 aa16.66■□□□□ 0.26
SEC13-212ENST00000432213 FAM47CQ5HY64 1035 aa16.66■□□□□ 0.26
SEC13-212ENST00000432213 CHD1LQ86WJ1 897 aa16.66■□□□□ 0.26
SEC13-212ENST00000432213 STAG2Q8N3U4 1231 aa16.66■□□□□ 0.26
SEC13-212ENST00000432213 PNMA1Q8ND90 353 aa16.66■□□□□ 0.26
SEC13-212ENST00000432213 SYTL5Q8TDW5 730 aaPredicted RBP16.66■□□□□ 0.26
SEC13-212ENST00000432213 AFG1LQ8WV93 481 aa16.66■□□□□ 0.26
SEC13-212ENST00000432213 DHX38Q92620 1227 aaKnown RBP16.66■□□□□ 0.26
SEC13-212ENST00000432213 KAT2BQ92831 832 aa16.66■□□□□ 0.26
SEC13-212ENST00000432213 TTC14Q96N46 770 aa16.66■□□□□ 0.26
SEC13-212ENST00000432213 GAS2L1Q99501 681 aaPredicted RBP16.66■□□□□ 0.26
SEC13-212ENST00000432213 CERS4Q9HA82 394 aa16.66■□□□□ 0.26
SEC13-212ENST00000432213 POLR3EQ9NVU0 708 aa16.66■□□□□ 0.26
SEC13-212ENST00000432213 ZBTB47Q9UFB7 747 aaPredicted RBP16.66■□□□□ 0.26
SEC13-212ENST00000432213 MSRAQ9UJ68 235 aa16.66■□□□□ 0.26
SEC13-212ENST00000432213 TAF6LQ9Y6J9 622 aa16.66■□□□□ 0.26
SEC13-212ENST00000432213 SLC4A7Q9Y6M7 1214 aa16.66■□□□□ 0.26
SEC13-212ENST00000432213 MMP3P08254 477 aa16.65■□□□□ 0.26
SEC13-212ENST00000432213 CPT1AP50416 773 aa16.65■□□□□ 0.26
SEC13-212ENST00000432213 CHMP4BP1P59074 171 aa16.65■□□□□ 0.26
SEC13-212ENST00000432213 TJAP1Q5JTD0 557 aa16.65■□□□□ 0.26
SEC13-212ENST00000432213 DGKHQ86XP1 1220 aa16.65■□□□□ 0.26
SEC13-212ENST00000432213 SCFD2Q8WU76 684 aa16.65■□□□□ 0.26
SEC13-212ENST00000432213 ESR2Q92731 530 aa16.65■□□□□ 0.26
SEC13-212ENST00000432213 WNT8BQ93098 351 aa16.65■□□□□ 0.26
SEC13-212ENST00000432213 OSBPL3Q9H4L5 887 aa16.65■□□□□ 0.26
SEC13-212ENST00000432213 ZSWIM5Q9P217 1185 aa16.65■□□□□ 0.26
SEC13-212ENST00000432213 ATG2AQ2TAZ0 1938 aa16.64■□□□□ 0.26
SEC13-212ENST00000432213 SIP14410 1827 aa16.64■□□□□ 0.25
SEC13-212ENST00000432213 XIRP2A4UGR9 3374 aa16.64■□□□□ 0.25
SEC13-212ENST00000432213 MICAL3Q7RTP6 2002 aa16.64■□□□□ 0.25
SEC13-212ENST00000432213 LOC102724159A0A0B4J2E5 919 aa16.64■□□□□ 0.25
SEC13-212ENST00000432213 CA3P07451 260 aa16.64■□□□□ 0.25
SEC13-212ENST00000432213 IQCF3P0C7M6 154 aa16.64■□□□□ 0.25
SEC13-212ENST00000432213 ATP2A2P16615 1042 aaKnown RBP16.64■□□□□ 0.25
SEC13-212ENST00000432213 PDE4AP27815 886 aa16.64■□□□□ 0.25
SEC13-212ENST00000432213 HIC1Q14526 733 aa16.64■□□□□ 0.25
SEC13-212ENST00000432213 PWP2Q15269 919 aaKnown RBP16.64■□□□□ 0.25
SEC13-212ENST00000432213 PPP2R2DQ66LE6 453 aa16.64■□□□□ 0.25
SEC13-212ENST00000432213 GDF6Q6KF10 455 aaPredicted RBP16.64■□□□□ 0.25
SEC13-212ENST00000432213 SEPT14Q6ZU15 432 aa16.64■□□□□ 0.25
SEC13-212ENST00000432213 CYB5R4Q7L1T6 521 aa16.64■□□□□ 0.25
SEC13-212ENST00000432213 DNERQ8NFT8 737 aa16.64■□□□□ 0.25
SEC13-212ENST00000432213 ANKS1AQ92625 1134 aa16.64■□□□□ 0.25
SEC13-212ENST00000432213 ZFP91Q96JP5 570 aaPredicted RBP16.64■□□□□ 0.25
SEC13-212ENST00000432213 YTHDC1Q96MU7 727 aaKnown RBP16.64■□□□□ 0.25
SEC13-212ENST00000432213 NECAB3Q96P71 396 aaPredicted RBP16.64■□□□□ 0.25
SEC13-212ENST00000432213 ZSCAN10Q96SZ4 725 aaPredicted RBP16.64■□□□□ 0.25
SEC13-212ENST00000432213 JMJD4Q9H9V9 463 aa16.64■□□□□ 0.25
SEC13-212ENST00000432213 SLC28A3Q9HAS3 691 aa16.64■□□□□ 0.25
SEC13-212ENST00000432213 SENP2Q9HC62 589 aa16.64■□□□□ 0.25
SEC13-212ENST00000432213 RAPGEFL1Q9UHV5 662 aa16.64■□□□□ 0.25
SEC13-212ENST00000432213 ZNF213O14771 459 aa16.63■□□□□ 0.25
SEC13-212ENST00000432213 SORBS3O60504 671 aa16.63■□□□□ 0.25
SEC13-212ENST00000432213 TFF2Q03403 129 aa16.63■□□□□ 0.25
SEC13-212ENST00000432213 GPATCH4Q5T3I0 446 aaKnown RBP16.63■□□□□ 0.25
SEC13-212ENST00000432213 NFRKBQ6P4R8 1299 aa16.63■□□□□ 0.25
SEC13-212ENST00000432213 CHST3Q7LGC8 479 aa16.63■□□□□ 0.25
SEC13-212ENST00000432213 MICALL1Q8N3F8 863 aa16.63■□□□□ 0.25
SEC13-212ENST00000432213 IL31RAQ8NI17 732 aa16.63■□□□□ 0.25
SEC13-212ENST00000432213 VAT1LQ9HCJ6 419 aa16.63■□□□□ 0.25
SEC13-212ENST00000432213 PCDHA11Q9Y5I1 949 aa16.63■□□□□ 0.25
SEC13-212ENST00000432213 RGS20O76081 388 aa16.62■□□□□ 0.25
SEC13-212ENST00000432213 PCP11498 1178 aaKnown RBP16.62■□□□□ 0.25
SEC13-212ENST00000432213 GSPT1P15170 499 aaKnown RBP16.62■□□□□ 0.25
SEC13-212ENST00000432213 EIF2AK2P19525 551 aaKnown RBP16.62■□□□□ 0.25
SEC13-212ENST00000432213 SEC23AQ15436 765 aa16.62■□□□□ 0.25
SEC13-212ENST00000432213 GPKOWQ92917 476 aaPredicted RBP eCLIP16.62■□□□□ 0.25
SEC13-212ENST00000432213 SEZ6LQ9BYH1 1024 aa16.62■□□□□ 0.25
SEC13-212ENST00000432213 RNF41Q9H4P4 317 aaPredicted RBP16.62■□□□□ 0.25
SEC13-212ENST00000432213 KAT14Q9H8E8 782 aa16.62■□□□□ 0.25
SEC13-212ENST00000432213 THEGQ9P2T0 379 aa16.62■□□□□ 0.25
SEC13-212ENST00000432213 ABCB11O95342 1321 aa16.62■□□□□ 0.25
SEC13-212ENST00000432213 LCHNA4D1U4 455 aa16.61■□□□□ 0.25
SEC13-212ENST00000432213 NKRFO15226 690 aaKnown RBP eCLIP16.61■□□□□ 0.25
SEC13-212ENST00000432213 ZNF286BP0CG31 522 aa16.61■□□□□ 0.25
SEC13-212ENST00000432213 ZNF200P98182 395 aaPredicted RBP16.61■□□□□ 0.25
SEC13-212ENST00000432213 TRAF7Q6Q0C0 670 aa16.61■□□□□ 0.25
SEC13-212ENST00000432213 TICAM2Q86XR7 235 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms