RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 LRRC27Q9C0I9 530 aa14.42□□□□□ -0.1
DDX56-204ENST00000431640 INTS13Q9NVM9 706 aa14.42□□□□□ -0.1
DDX56-204ENST00000431640 TRMT1Q9NXH9 659 aaKnown RBP14.42□□□□□ -0.1
DDX56-204ENST00000431640 LIMA1Q9UHB6 759 aaKnown RBP14.42□□□□□ -0.1
DDX56-204ENST00000431640 SYNPO2Q9UMS6 1093 aa14.42□□□□□ -0.1
DDX56-204ENST00000431640 DOCK1Q14185 1865 aa14.42□□□□□ -0.1
DDX56-204ENST00000431640 GOLGA6L9A6NEM1 432 aa14.41□□□□□ -0.1
DDX56-204ENST00000431640 RHOBTB3O94955 611 aa14.41□□□□□ -0.1
DDX56-204ENST00000431640 GDF11O95390 407 aa14.41□□□□□ -0.1
DDX56-204ENST00000431640 EEF2P13639 858 aaKnown RBP14.41□□□□□ -0.1
DDX56-204ENST00000431640 GCFC2P16383 781 aaKnown RBP14.41□□□□□ -0.1
DDX56-204ENST00000431640 TECP42680 631 aa14.41□□□□□ -0.1
DDX56-204ENST00000431640 MAP3K10Q02779 954 aa14.41□□□□□ -0.1
DDX56-204ENST00000431640 SYCP1Q15431 976 aa14.41□□□□□ -0.1
DDX56-204ENST00000431640 PPFIBP1Q86W92 1011 aa14.41□□□□□ -0.1
DDX56-204ENST00000431640 NOC3LQ8WTT2 800 aaKnown RBP14.41□□□□□ -0.1
DDX56-204ENST00000431640 NELFBQ8WX92 580 aa14.41□□□□□ -0.1
DDX56-204ENST00000431640 DHTKD1Q96HY7 919 aaPredicted RBP14.41□□□□□ -0.1
DDX56-204ENST00000431640 ADD3Q9UEY8 706 aaKnown RBP14.41□□□□□ -0.1
DDX56-204ENST00000431640 CTNND2Q9UQB3 1225 aa14.41□□□□□ -0.1
DDX56-204ENST00000431640 MYH4Q9Y623 1939 aa14.4□□□□□ -0.1
DDX56-204ENST00000431640 DCAF8L1A6NGE4 600 aa14.4□□□□□ -0.1
DDX56-204ENST00000431640 USP27XA6NNY8 438 aa14.4□□□□□ -0.1
DDX56-204ENST00000431640 PHF20L1A8MW92 1017 aa14.4□□□□□ -0.1
DDX56-204ENST00000431640 TPM1P09493 284 aa14.4□□□□□ -0.1
DDX56-204ENST00000431640 SLC1A4P43007 532 aa14.4□□□□□ -0.1
DDX56-204ENST00000431640 TNNI2P48788 182 aa14.4□□□□□ -0.1
DDX56-204ENST00000431640 CLK2P49760 499 aaKnown RBP14.4□□□□□ -0.1
DDX56-204ENST00000431640 KMT5BQ4FZB7 885 aa14.4□□□□□ -0.1
DDX56-204ENST00000431640 HSP90AA4PQ58FG1 418 aa14.4□□□□□ -0.1
DDX56-204ENST00000431640 SLFN13Q68D06 897 aa14.4□□□□□ -0.1
DDX56-204ENST00000431640 TTBK2Q6IQ55 1244 aa14.4□□□□□ -0.1
DDX56-204ENST00000431640 APTXQ7Z2E3 356 aaKnown RBP14.4□□□□□ -0.1
DDX56-204ENST00000431640 ADSSL1Q8N142 457 aa14.4□□□□□ -0.1
DDX56-204ENST00000431640 GIMAP8Q8ND71 665 aaPredicted RBP14.4□□□□□ -0.1
DDX56-204ENST00000431640 PPP1R13BQ96KQ4 1090 aa14.4□□□□□ -0.1
DDX56-204ENST00000431640 BAG1Q99933 345 aaPredicted RBP14.4□□□□□ -0.1
DDX56-204ENST00000431640 NAA15Q9BXJ9 866 aaKnown RBP14.4□□□□□ -0.1
DDX56-204ENST00000431640 PSTPIP2Q9H939 334 aa14.4□□□□□ -0.1
DDX56-204ENST00000431640 TMEM260Q9NX78 707 aa14.4□□□□□ -0.1
DDX56-204ENST00000431640 STK17AQ9UEE5 414 aa14.4□□□□□ -0.1
DDX56-204ENST00000431640 LRWD1Q9UFC0 647 aa14.4□□□□□ -0.1
DDX56-204ENST00000431640 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.4□□□□□ -0.1
DDX56-204ENST00000431640 ITIH6Q6UXX5 1313 aa14.4□□□□□ -0.1
DDX56-204ENST00000431640 PHIPQ8WWQ0 1821 aa14.39□□□□□ -0.11
DDX56-204ENST00000431640 PP2D1A8MPX8 630 aa14.39□□□□□ -0.11
DDX56-204ENST00000431640 USP17L10C9JJH3 530 aa14.39□□□□□ -0.11
DDX56-204ENST00000431640 AKR1B15C9JRZ8 316 aaPredicted RBP14.39□□□□□ -0.11
DDX56-204ENST00000431640 PSMA7O14818 248 aa14.39□□□□□ -0.11
DDX56-204ENST00000431640 CTIFO43310 598 aaKnown RBP14.39□□□□□ -0.11
DDX56-204ENST00000431640 SLC26A4O43511 780 aa14.39□□□□□ -0.11
DDX56-204ENST00000431640 PLCG1P19174 1290 aa14.39□□□□□ -0.11
DDX56-204ENST00000431640 TXKP42681 527 aa14.39□□□□□ -0.11
DDX56-204ENST00000431640 PRCPP42785 496 aa14.39□□□□□ -0.11
DDX56-204ENST00000431640 ABCB5Q2M3G0 1257 aa14.39□□□□□ -0.11
DDX56-204ENST00000431640 MAP1SQ66K74 1059 aaPredicted RBP14.39□□□□□ -0.11
DDX56-204ENST00000431640 KCTD1Q719H9 257 aa14.39□□□□□ -0.11
DDX56-204ENST00000431640 SV2BQ7L1I2 683 aa14.39□□□□□ -0.11
DDX56-204ENST00000431640 KRT26Q7Z3Y9 468 aa14.39□□□□□ -0.11
DDX56-204ENST00000431640 SMYD4Q8IYR2 804 aaPredicted RBP14.39□□□□□ -0.11
DDX56-204ENST00000431640 GMCL1P1Q8NEA9 526 aa14.39□□□□□ -0.11
DDX56-204ENST00000431640 ZC3H15Q8WU90 426 aaKnown RBP14.39□□□□□ -0.11
DDX56-204ENST00000431640 CCDC51Q96ER9 411 aa14.39□□□□□ -0.11
DDX56-204ENST00000431640 PANX2Q96RD6 677 aa14.39□□□□□ -0.11
DDX56-204ENST00000431640 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.39□□□□□ -0.11
DDX56-204ENST00000431640 HERC5Q9UII4 1024 aaKnown RBP14.39□□□□□ -0.11
DDX56-204ENST00000431640 BICDL2A1A5D9 508 aa14.39□□□□□ -0.11
DDX56-204ENST00000431640 TRAF5O00463 557 aa14.39□□□□□ -0.11
DDX56-204ENST00000431640 KLRC4O43908 158 aa14.39□□□□□ -0.11
DDX56-204ENST00000431640 TBC1D12O60347 775 aa14.39□□□□□ -0.11
DDX56-204ENST00000431640 USP11P51784 963 aa14.39□□□□□ -0.11
DDX56-204ENST00000431640 TRAF1Q13077 416 aa14.39□□□□□ -0.11
DDX56-204ENST00000431640 COBLL1Q53SF7 1204 aa14.39□□□□□ -0.11
DDX56-204ENST00000431640 POTEDQ86YR6 584 aa14.39□□□□□ -0.11
DDX56-204ENST00000431640 TEX2Q8IWB9 1127 aa14.39□□□□□ -0.11
DDX56-204ENST00000431640 TC2NQ8N9U0 490 aa14.39□□□□□ -0.11
DDX56-204ENST00000431640 ZNF592Q92610 1267 aa14.39□□□□□ -0.11
DDX56-204ENST00000431640 DCPSQ96C86 337 aaKnown RBP14.39□□□□□ -0.11
DDX56-204ENST00000431640 GMCL1Q96IK5 515 aa14.39□□□□□ -0.11
DDX56-204ENST00000431640 CDK5RAP3Q96JB5 506 aa14.39□□□□□ -0.11
DDX56-204ENST00000431640 THAP9Q9H5L6 903 aa14.39□□□□□ -0.11
DDX56-204ENST00000431640 PPP2R3BQ9Y5P8 575 aa14.39□□□□□ -0.11
DDX56-204ENST00000431640 N4BP3O15049 544 aa14.38□□□□□ -0.11
DDX56-204ENST00000431640 EEF1GP26641 437 aaKnown RBP14.38□□□□□ -0.11
DDX56-204ENST00000431640 SLC16A2P36021 539 aa14.38□□□□□ -0.11
DDX56-204ENST00000431640 PBX1P40424 430 aa14.38□□□□□ -0.11
DDX56-204ENST00000431640 ICA1Q05084 483 aa14.38□□□□□ -0.11
DDX56-204ENST00000431640 TRIM14Q14142 442 aa14.38□□□□□ -0.11
DDX56-204ENST00000431640 HSP90AA2PQ14568 343 aaPredicted RBP14.38□□□□□ -0.11
DDX56-204ENST00000431640 TCP11X2Q5H9J9 407 aa14.38□□□□□ -0.11
DDX56-204ENST00000431640 KRT79Q5XKE5 535 aa14.38□□□□□ -0.11
DDX56-204ENST00000431640 CNNM4Q6P4Q7 775 aa14.38□□□□□ -0.11
DDX56-204ENST00000431640 CCDC84Q86UT8 332 aaPredicted RBP14.38□□□□□ -0.11
DDX56-204ENST00000431640 PNMA8AQ86V59 439 aaPredicted RBP14.38□□□□□ -0.11
DDX56-204ENST00000431640 CDCA5Q96FF9 252 aa14.38□□□□□ -0.11
DDX56-204ENST00000431640 TRIM9Q9C026 710 aa14.38□□□□□ -0.11
DDX56-204ENST00000431640 PDCL3Q9H2J4 239 aa14.38□□□□□ -0.11
DDX56-204ENST00000431640 PVALEFA0A1B0GWK0 134 aa14.37□□□□□ -0.11
DDX56-204ENST00000431640 KCNJ18B7U540 433 aa14.37□□□□□ -0.11
DDX56-204ENST00000431640 F5H6K3 240 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms