RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 NDUFB10O96000 172 aa15.63■□□□□ 0.09
HOXC4-202ENST00000430889 FCER1AP12319 257 aa15.63■□□□□ 0.09
HOXC4-202ENST00000430889 HOXA7P31268 230 aaPredicted RBP15.63■□□□□ 0.09
HOXC4-202ENST00000430889 MCM6Q14566 821 aa15.63■□□□□ 0.09
HOXC4-202ENST00000430889 ABCB5Q2M3G0 1257 aa15.63■□□□□ 0.09
HOXC4-202ENST00000430889 GRIPAP1Q4V328 841 aa15.63■□□□□ 0.09
HOXC4-202ENST00000430889 MOXD1Q6UVY6 613 aa15.63■□□□□ 0.09
HOXC4-202ENST00000430889 UNC13DQ70J99 1090 aa15.63■□□□□ 0.09
HOXC4-202ENST00000430889 SV2BQ7L1I2 683 aa15.63■□□□□ 0.09
HOXC4-202ENST00000430889 KCNK18Q7Z418 384 aa15.63■□□□□ 0.09
HOXC4-202ENST00000430889 ANKRD20A12PQ8NF67 263 aa15.63■□□□□ 0.09
HOXC4-202ENST00000430889 LARP4BQ92615 738 aaKnown RBP15.63■□□□□ 0.09
HOXC4-202ENST00000430889 P2RX7Q99572 595 aaKnown RBP15.63■□□□□ 0.09
HOXC4-202ENST00000430889 RAB34Q9BZG1 259 aa15.63■□□□□ 0.09
HOXC4-202ENST00000430889 KCNMB3Q9NPA1 279 aa15.63■□□□□ 0.09
HOXC4-202ENST00000430889 STK32BQ9NY57 414 aa15.63■□□□□ 0.09
HOXC4-202ENST00000430889 ADGRG1Q9Y653 693 aa15.63■□□□□ 0.09
HOXC4-202ENST00000430889 SMCHD1A6NHR9 2005 aa15.63■□□□□ 0.09
HOXC4-202ENST00000430889 F5H6K3 240 aa15.63■□□□□ 0.09
HOXC4-202ENST00000430889 PPIP5K2O43314 1243 aa15.63■□□□□ 0.09
HOXC4-202ENST00000430889 SLC26A4O43511 780 aa15.63■□□□□ 0.09
HOXC4-202ENST00000430889 GDF11O95390 407 aa15.63■□□□□ 0.09
HOXC4-202ENST00000430889 USP11P51784 963 aa15.63■□□□□ 0.09
HOXC4-202ENST00000430889 KLRC3Q07444 240 aa15.63■□□□□ 0.09
HOXC4-202ENST00000430889 ECM1Q16610 540 aa15.63■□□□□ 0.09
HOXC4-202ENST00000430889 ANKRD40Q6AI12 368 aa15.63■□□□□ 0.09
HOXC4-202ENST00000430889 CENPPQ6IPU0 288 aa15.63■□□□□ 0.09
HOXC4-202ENST00000430889 MB21D1Q8N884 522 aa15.63■□□□□ 0.09
HOXC4-202ENST00000430889 CCDC47Q96A33 483 aaKnown RBP15.63■□□□□ 0.09
HOXC4-202ENST00000430889 KIFC2Q96AC6 838 aa15.63■□□□□ 0.09
HOXC4-202ENST00000430889 TRIM47Q96LD4 638 aa15.63■□□□□ 0.09
HOXC4-202ENST00000430889 PSMD1Q99460 953 aa15.63■□□□□ 0.09
HOXC4-202ENST00000430889 SRRTQ9BXP5 876 aaKnown RBP15.63■□□□□ 0.09
HOXC4-202ENST00000430889 MRPL44Q9H9J2 332 aaKnown RBP15.63■□□□□ 0.09
HOXC4-202ENST00000430889 ABHD10Q9NUJ1 306 aa15.63■□□□□ 0.09
HOXC4-202ENST00000430889 DNAI1Q9UI46 699 aa15.63■□□□□ 0.09
HOXC4-202ENST00000430889 PCDHA1Q9Y5I3 950 aa15.63■□□□□ 0.09
HOXC4-202ENST00000430889 BICDL2A1A5D9 508 aa15.62■□□□□ 0.09
HOXC4-202ENST00000430889 USP17L15C9J2P7 530 aa15.62■□□□□ 0.09
HOXC4-202ENST00000430889 USP17L13C9JLJ4 530 aa15.62■□□□□ 0.09
HOXC4-202ENST00000430889 USP17L11C9JVI0 530 aa15.62■□□□□ 0.09
HOXC4-202ENST00000430889 USP17L18D6R9N7 530 aa15.62■□□□□ 0.09
HOXC4-202ENST00000430889 USP17L22D6RA61 530 aa15.62■□□□□ 0.09
HOXC4-202ENST00000430889 USP17L17D6RBQ6 530 aa15.62■□□□□ 0.09
HOXC4-202ENST00000430889 USP17L19D6RCP7 530 aa15.62■□□□□ 0.09
HOXC4-202ENST00000430889 USP17L20D6RJB6 530 aa15.62■□□□□ 0.09
HOXC4-202ENST00000430889 ERVK-24P63145 666 aa15.62■□□□□ 0.09
HOXC4-202ENST00000430889 USP17L24Q0WX57 530 aa15.62■□□□□ 0.09
HOXC4-202ENST00000430889 AP3B2Q13367 1082 aa15.62■□□□□ 0.09
HOXC4-202ENST00000430889 FOXR2Q6PJQ5 311 aa15.62■□□□□ 0.09
HOXC4-202ENST00000430889 USP17L6PQ6QN14 398 aa15.62■□□□□ 0.09
HOXC4-202ENST00000430889 POTEAQ6S8J7 498 aa15.62■□□□□ 0.09
HOXC4-202ENST00000430889 ZSCAN29Q8IWY8 852 aaPredicted RBP15.62■□□□□ 0.09
HOXC4-202ENST00000430889 SNX29Q8TEQ0 813 aa15.62■□□□□ 0.09
HOXC4-202ENST00000430889 DESI2Q9BSY9 194 aa15.62■□□□□ 0.09
HOXC4-202ENST00000430889 ANO3Q9BYT9 981 aa15.62■□□□□ 0.09
HOXC4-202ENST00000430889 SEMA6BQ9H3T3 888 aa15.62■□□□□ 0.09
HOXC4-202ENST00000430889 SPDYE2BA6NHP3 402 aa15.61■□□□□ 0.09
HOXC4-202ENST00000430889 C21orf2O43822 256 aa15.61■□□□□ 0.09
HOXC4-202ENST00000430889 VIL1P09327 827 aaKnown RBP15.61■□□□□ 0.09
HOXC4-202ENST00000430889 SPDYE6P0CI01 402 aa15.61■□□□□ 0.09
HOXC4-202ENST00000430889 EN1Q05925 392 aaPredicted RBP15.61■□□□□ 0.09
HOXC4-202ENST00000430889 KRT79Q5XKE5 535 aa15.61■□□□□ 0.09
HOXC4-202ENST00000430889 RSBN1LQ6PCB5 846 aaPredicted RBP15.61■□□□□ 0.09
HOXC4-202ENST00000430889 LRRN4CLQ8ND94 238 aa15.61■□□□□ 0.09
HOXC4-202ENST00000430889 CPLX3Q8WVH0 158 aa15.61■□□□□ 0.09
HOXC4-202ENST00000430889 WDR24Q96S15 920 aa15.61■□□□□ 0.09
HOXC4-202ENST00000430889 TTYH3Q9C0H2 523 aa15.61■□□□□ 0.09
HOXC4-202ENST00000430889 HERC5Q9UII4 1024 aaKnown RBP15.61■□□□□ 0.09
HOXC4-202ENST00000430889 CNTNAP1P78357 1384 aa15.61■□□□□ 0.09
HOXC4-202ENST00000430889 A0A1W2PRG0 241 aa15.6■□□□□ 0.09
HOXC4-202ENST00000430889 OPLAHO14841 1288 aa15.6■□□□□ 0.09
HOXC4-202ENST00000430889 GH2P01242 217 aa15.6■□□□□ 0.09
HOXC4-202ENST00000430889 CCDC175P0C221 793 aa15.6■□□□□ 0.09
HOXC4-202ENST00000430889 UBXN1Q04323 297 aa15.6■□□□□ 0.09
HOXC4-202ENST00000430889 SYDE2Q5VT97 1194 aa15.6■□□□□ 0.09
HOXC4-202ENST00000430889 TMTC1Q8IUR5 882 aa15.6■□□□□ 0.09
HOXC4-202ENST00000430889 CSGALNACT2Q8N6G5 542 aa15.6■□□□□ 0.09
HOXC4-202ENST00000430889 DNAJC19Q96DA6 116 aa15.6■□□□□ 0.09
HOXC4-202ENST00000430889 TRIM34Q9BYJ4 488 aa15.6■□□□□ 0.09
HOXC4-202ENST00000430889 RBBP6Q7Z6E9 1792 aaKnown RBP15.6■□□□□ 0.09
HOXC4-202ENST00000430889 RASSF10A6NK89 507 aa15.6■□□□□ 0.09
HOXC4-202ENST00000430889 KCNA3P22001 575 aa15.6■□□□□ 0.09
HOXC4-202ENST00000430889 DNM2P50570 870 aa15.6■□□□□ 0.09
HOXC4-202ENST00000430889 MIIPQ5JXC2 388 aa15.6■□□□□ 0.09
HOXC4-202ENST00000430889 RBM26Q5T8P6 1007 aaKnown RBP15.6■□□□□ 0.09
HOXC4-202ENST00000430889 MCTP2Q6DN12 878 aa15.6■□□□□ 0.09
HOXC4-202ENST00000430889 GUF1Q8N442 669 aaKnown RBP15.6■□□□□ 0.09
HOXC4-202ENST00000430889 PDCL2Q8N4E4 241 aa15.6■□□□□ 0.09
HOXC4-202ENST00000430889 ETNPPLQ8TBG4 499 aa15.6■□□□□ 0.09
HOXC4-202ENST00000430889 HPS3Q969F9 1004 aa15.6■□□□□ 0.09
HOXC4-202ENST00000430889 LENG9Q96B70 501 aa15.6■□□□□ 0.09
HOXC4-202ENST00000430889 NUP88Q99567 741 aaPredicted RBP15.6■□□□□ 0.09
HOXC4-202ENST00000430889 DNAJC7Q99615 494 aa15.6■□□□□ 0.09
HOXC4-202ENST00000430889 AMNQ9BXJ7 453 aa15.6■□□□□ 0.09
HOXC4-202ENST00000430889 TPM1P09493 284 aa15.59■□□□□ 0.09
HOXC4-202ENST00000430889 SPIRE1Q08AE8 756 aa15.59■□□□□ 0.09
HOXC4-202ENST00000430889 GJA10Q969M2 543 aa15.59■□□□□ 0.09
HOXC4-202ENST00000430889 CDK5RAP3Q96JB5 506 aa15.59■□□□□ 0.09
HOXC4-202ENST00000430889 CNOT6LQ96LI5 555 aaKnown RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms