RNA–Protein interactions for RNA: ENST00000430705.5

PTPRA-206, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 733 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-206ENST00000430705 UBAC1Q9BSL1 405 aa19.01■□□□□ 0.63
PTPRA-206ENST00000430705 ALDH8A1Q9H2A2 487 aaPredicted RBP19.01■□□□□ 0.63
PTPRA-206ENST00000430705 HIPK3Q9H422 1215 aa19.01■□□□□ 0.63
PTPRA-206ENST00000430705 MAD2L2Q9UI95 211 aa19.01■□□□□ 0.63
PTPRA-206ENST00000430705 GRXCR1A8MXD5 290 aa19■□□□□ 0.63
PTPRA-206ENST00000430705 ZEB2O60315 1214 aa19■□□□□ 0.63
PTPRA-206ENST00000430705 DNAJB2P25686 324 aa19■□□□□ 0.63
PTPRA-206ENST00000430705 CCDC62Q6P9F0 684 aa19■□□□□ 0.63
PTPRA-206ENST00000430705 ZNF365Q70YC5 407 aa19■□□□□ 0.63
PTPRA-206ENST00000430705 SCFD2Q8WU76 684 aa19■□□□□ 0.63
PTPRA-206ENST00000430705 TRMT13Q9NUP7 481 aaKnown RBP19■□□□□ 0.63
PTPRA-206ENST00000430705 A6NJR5 290 aa18.99■□□□□ 0.63
PTPRA-206ENST00000430705 SGSM2O43147 1006 aa18.99■□□□□ 0.63
PTPRA-206ENST00000430705 MYL3P08590 195 aa18.99■□□□□ 0.63
PTPRA-206ENST00000430705 PBX2P40425 430 aa18.99■□□□□ 0.63
PTPRA-206ENST00000430705 CPT1AP50416 773 aa18.99■□□□□ 0.63
PTPRA-206ENST00000430705 GHRHRQ02643 423 aa18.99■□□□□ 0.63
PTPRA-206ENST00000430705 FBXO11Q86XK2 927 aa18.99■□□□□ 0.63
PTPRA-206ENST00000430705 TMEM199Q8N511 208 aa18.99■□□□□ 0.63
PTPRA-206ENST00000430705 VAT1LQ9HCJ6 419 aa18.99■□□□□ 0.63
PTPRA-206ENST00000430705 IL23AQ9NPF7 189 aa18.99■□□□□ 0.63
PTPRA-206ENST00000430705 POLR3EQ9NVU0 708 aa18.99■□□□□ 0.63
PTPRA-206ENST00000430705 CXXC1Q9P0U4 656 aaPredicted RBP18.99■□□□□ 0.63
PTPRA-206ENST00000430705 SCN5AQ14524 2016 aa18.99■□□□□ 0.63
PTPRA-206ENST00000430705 REV3LO60673 3130 aa18.99■□□□□ 0.63
PTPRA-206ENST00000430705 CUL9Q8IWT3 2517 aa18.98■□□□□ 0.63
PTPRA-206ENST00000430705 TMEM265A0A087WTH1 108 aa18.98■□□□□ 0.63
PTPRA-206ENST00000430705 PALM3A6NDB9 673 aaPredicted RBP18.98■□□□□ 0.63
PTPRA-206ENST00000430705 NKRFO15226 690 aaKnown RBP eCLIP18.98■□□□□ 0.63
PTPRA-206ENST00000430705 CCL23P55773 120 aa18.98■□□□□ 0.63
PTPRA-206ENST00000430705 ANTXR2P58335 489 aa18.98■□□□□ 0.63
PTPRA-206ENST00000430705 COL9A3Q14050 684 aaPredicted RBP18.98■□□□□ 0.63
PTPRA-206ENST00000430705 PSRC1Q6PGN9 363 aaPredicted RBP18.98■□□□□ 0.63
PTPRA-206ENST00000430705 SEZ6LQ9BYH1 1024 aa18.98■□□□□ 0.63
PTPRA-206ENST00000430705 MAF1Q9H063 256 aa18.98■□□□□ 0.63
PTPRA-206ENST00000430705 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.97■□□□□ 0.63
PTPRA-206ENST00000430705 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.97■□□□□ 0.63
PTPRA-206ENST00000430705 KLRF2D3W0D1 207 aa18.97■□□□□ 0.63
PTPRA-206ENST00000430705 E7EWF7 191 aa18.97■□□□□ 0.63
PTPRA-206ENST00000430705 DHX16O60231 1041 aaKnown RBP18.97■□□□□ 0.63
PTPRA-206ENST00000430705 TXNP10599 105 aaKnown RBP18.97■□□□□ 0.63
PTPRA-206ENST00000430705 CYP2C9P11712 490 aa18.97■□□□□ 0.63
PTPRA-206ENST00000430705 HSD17B4P51659 736 aa18.97■□□□□ 0.63
PTPRA-206ENST00000430705 ARHGAP1Q07960 439 aa18.97■□□□□ 0.63
PTPRA-206ENST00000430705 GRM4Q14833 912 aa18.97■□□□□ 0.63
PTPRA-206ENST00000430705 HERVK_113Q902F9 699 aa18.97■□□□□ 0.63
PTPRA-206ENST00000430705 SCLYQ96I15 445 aa18.97■□□□□ 0.63
PTPRA-206ENST00000430705 MTG1Q9BT17 334 aaPredicted RBP18.97■□□□□ 0.63
PTPRA-206ENST00000430705 PBX4Q9BYU1 374 aa18.97■□□□□ 0.63
PTPRA-206ENST00000430705 CYTH3O43739 400 aa18.96■□□□□ 0.63
PTPRA-206ENST00000430705 GRIN2CQ14957 1233 aa18.96■□□□□ 0.63
PTPRA-206ENST00000430705 NBPF20Q3BBV1 942 aa18.96■□□□□ 0.63
PTPRA-206ENST00000430705 CHST3Q7LGC8 479 aa18.96■□□□□ 0.63
PTPRA-206ENST00000430705 RMDN3Q96TC7 470 aa18.96■□□□□ 0.63
PTPRA-206ENST00000430705 MRPL11Q9Y3B7 192 aaKnown RBP18.96■□□□□ 0.63
PTPRA-206ENST00000430705 TRANK1O15050 2925 aa18.95■□□□□ 0.62
PTPRA-206ENST00000430705 RBAK-RBAKDNI3L0D1 243 aa18.95■□□□□ 0.62
PTPRA-206ENST00000430705 DLL1O00548 723 aa18.95■□□□□ 0.62
PTPRA-206ENST00000430705 ZBTB5O15062 677 aa18.95■□□□□ 0.62
PTPRA-206ENST00000430705 EIF2AK2P19525 551 aaKnown RBP18.95■□□□□ 0.62
PTPRA-206ENST00000430705 TROAPQ12815 778 aa18.95■□□□□ 0.62
PTPRA-206ENST00000430705 TTLL4Q14679 1199 aa18.95■□□□□ 0.62
PTPRA-206ENST00000430705 LY6KQ17RY6 165 aa18.95■□□□□ 0.62
PTPRA-206ENST00000430705 SEPT14Q6ZU15 432 aa18.95■□□□□ 0.62
PTPRA-206ENST00000430705 MB21D2Q8IYB1 491 aaPredicted RBP18.95■□□□□ 0.62
PTPRA-206ENST00000430705 NSUN6Q8TEA1 469 aaKnown RBP18.95■□□□□ 0.62
PTPRA-206ENST00000430705 CTAGE1Q96RT6 745 aa18.95■□□□□ 0.62
PTPRA-206ENST00000430705 MPHOSPH6Q99547 160 aaKnown RBP18.95■□□□□ 0.62
PTPRA-206ENST00000430705 AMNQ9BXJ7 453 aa18.95■□□□□ 0.62
PTPRA-206ENST00000430705 PXMP2Q9NR77 195 aa18.95■□□□□ 0.62
PTPRA-206ENST00000430705 U3KPZ7 1027 aaPredicted RBP18.95■□□□□ 0.62
PTPRA-206ENST00000430705 RGS20O76081 388 aa18.94■□□□□ 0.62
PTPRA-206ENST00000430705 CFBP00751 764 aa18.94■□□□□ 0.62
PTPRA-206ENST00000430705 MMP3P08254 477 aa18.94■□□□□ 0.62
PTPRA-206ENST00000430705 MCF2L2Q86YR7 1114 aa18.94■□□□□ 0.62
PTPRA-206ENST00000430705 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.94■□□□□ 0.62
PTPRA-206ENST00000430705 MAFAQ8NHW3 353 aaPredicted RBP18.94■□□□□ 0.62
PTPRA-206ENST00000430705 IL31RAQ8NI17 732 aa18.94■□□□□ 0.62
PTPRA-206ENST00000430705 AFG1LQ8WV93 481 aa18.94■□□□□ 0.62
PTPRA-206ENST00000430705 RUFY2Q8WXA3 655 aa18.94■□□□□ 0.62
PTPRA-206ENST00000430705 KAT2BQ92831 832 aa18.94■□□□□ 0.62
PTPRA-206ENST00000430705 MAP4K1Q92918 833 aa18.94■□□□□ 0.62
PTPRA-206ENST00000430705 TIFAQ96CG3 184 aa18.94■□□□□ 0.62
PTPRA-206ENST00000430705 PIGSQ96S52 555 aa18.94■□□□□ 0.62
PTPRA-206ENST00000430705 IWS1Q96ST2 819 aa18.94■□□□□ 0.62
PTPRA-206ENST00000430705 RIOX1Q9H6W3 641 aa18.94■□□□□ 0.62
PTPRA-206ENST00000430705 GPHNQ9NQX3 736 aaPredicted RBP18.94■□□□□ 0.62
PTPRA-206ENST00000430705 IFIT3O14879 490 aaKnown RBP18.93■□□□□ 0.62
PTPRA-206ENST00000430705 OTOP2Q7RTS6 562 aa18.93■□□□□ 0.62
PTPRA-206ENST00000430705 SKAP1Q86WV1 359 aa18.93■□□□□ 0.62
PTPRA-206ENST00000430705 ZNF576Q9H609 170 aa18.93■□□□□ 0.62
PTPRA-206ENST00000430705 RBM8AQ9Y5S9 174 aaKnown RBP18.93■□□□□ 0.62
PTPRA-206ENST00000430705 PTPRSQ13332 1948 aa18.92■□□□□ 0.62
PTPRA-206ENST00000430705 B4DLN1 442 aa18.92■□□□□ 0.62
PTPRA-206ENST00000430705 NR3C2P08235 984 aa18.92■□□□□ 0.62
PTPRA-206ENST00000430705 FOSL2P15408 326 aa18.92■□□□□ 0.62
PTPRA-206ENST00000430705 HOXA13P31271 388 aaPredicted RBP18.92■□□□□ 0.62
PTPRA-206ENST00000430705 MRPL12P52815 198 aaKnown RBP18.92■□□□□ 0.62
PTPRA-206ENST00000430705 TRDNQ13061 729 aa18.92■□□□□ 0.62
PTPRA-206ENST00000430705 STXBP2Q15833 593 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 159.5 ms