RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 MROH7Q68CQ1 1323 aa13.77□□□□□ -0.21
HDAC4-202ENST00000430200 MB21D2Q8IYB1 491 aaPredicted RBP13.77□□□□□ -0.21
HDAC4-202ENST00000430200 IL31RAQ8NI17 732 aa13.77□□□□□ -0.21
HDAC4-202ENST00000430200 VTI1AQ96AJ9 217 aa13.77□□□□□ -0.21
HDAC4-202ENST00000430200 UBAC1Q9BSL1 405 aa13.77□□□□□ -0.21
HDAC4-202ENST00000430200 NOC4LQ9BVI4 516 aaKnown RBP13.77□□□□□ -0.21
HDAC4-202ENST00000430200 AP5M1Q9H0R1 490 aa13.77□□□□□ -0.21
HDAC4-202ENST00000430200 CNNM2Q9H8M5 875 aa13.77□□□□□ -0.21
HDAC4-202ENST00000430200 TRMT13Q9NUP7 481 aaKnown RBP13.77□□□□□ -0.21
HDAC4-202ENST00000430200 CXXC1Q9P0U4 656 aaPredicted RBP13.77□□□□□ -0.21
HDAC4-202ENST00000430200 CTNNA3Q9UI47 895 aa13.77□□□□□ -0.21
HDAC4-202ENST00000430200 PALM3A6NDB9 673 aaPredicted RBP13.76□□□□□ -0.21
HDAC4-202ENST00000430200 PBX2P40425 430 aa13.76□□□□□ -0.21
HDAC4-202ENST00000430200 SMAD3P84022 425 aaKnown RBP13.76□□□□□ -0.21
HDAC4-202ENST00000430200 PDE4DQ08499 809 aa13.76□□□□□ -0.21
HDAC4-202ENST00000430200 GRM4Q14833 912 aa13.76□□□□□ -0.21
HDAC4-202ENST00000430200 CCDC62Q6P9F0 684 aa13.76□□□□□ -0.21
HDAC4-202ENST00000430200 DNERQ8NFT8 737 aa13.76□□□□□ -0.21
HDAC4-202ENST00000430200 OR6J1Q8NGC5 347 aa13.76□□□□□ -0.21
HDAC4-202ENST00000430200 CTAGE1Q96RT6 745 aa13.76□□□□□ -0.21
HDAC4-202ENST00000430200 VAT1LQ9HCJ6 419 aa13.76□□□□□ -0.21
HDAC4-202ENST00000430200 Q9Y3F1 56 aa13.76□□□□□ -0.21
HDAC4-202ENST00000430200 MICAL3Q7RTP6 2002 aa13.76□□□□□ -0.21
HDAC4-202ENST00000430200 ATG2AQ2TAZ0 1938 aa13.75□□□□□ -0.21
HDAC4-202ENST00000430200 LOC102724159A0A0B4J2E5 919 aa13.75□□□□□ -0.21
HDAC4-202ENST00000430200 KLRF2D3W0D1 207 aa13.75□□□□□ -0.21
HDAC4-202ENST00000430200 RGS20O76081 388 aa13.75□□□□□ -0.21
HDAC4-202ENST00000430200 EIF2AK2P19525 551 aaKnown RBP13.75□□□□□ -0.21
HDAC4-202ENST00000430200 HSD17B4P51659 736 aa13.75□□□□□ -0.21
HDAC4-202ENST00000430200 GHRHRQ02643 423 aa13.75□□□□□ -0.21
HDAC4-202ENST00000430200 ARHGAP1Q07960 439 aa13.75□□□□□ -0.21
HDAC4-202ENST00000430200 TROAPQ12815 778 aa13.75□□□□□ -0.21
HDAC4-202ENST00000430200 PPP2R5BQ15173 497 aa13.75□□□□□ -0.21
HDAC4-202ENST00000430200 PWP2Q15269 919 aaKnown RBP13.75□□□□□ -0.21
HDAC4-202ENST00000430200 ZNF697Q5TEC3 545 aa13.75□□□□□ -0.21
HDAC4-202ENST00000430200 FBXO11Q86XK2 927 aa13.75□□□□□ -0.21
HDAC4-202ENST00000430200 MYLIPQ8WY64 445 aa13.75□□□□□ -0.21
HDAC4-202ENST00000430200 CDX2Q99626 313 aaPredicted RBP13.75□□□□□ -0.21
HDAC4-202ENST00000430200 MYL10Q9BUA6 226 aa13.75□□□□□ -0.21
HDAC4-202ENST00000430200 LSG1Q9H089 658 aaKnown RBP13.75□□□□□ -0.21
HDAC4-202ENST00000430200 ALDH8A1Q9H2A2 487 aaPredicted RBP13.75□□□□□ -0.21
HDAC4-202ENST00000430200 HIPK3Q9H422 1215 aa13.75□□□□□ -0.21
HDAC4-202ENST00000430200 RBM8AQ9Y5S9 174 aaKnown RBP13.75□□□□□ -0.21
HDAC4-202ENST00000430200 DHX16O60231 1041 aaKnown RBP13.74□□□□□ -0.21
HDAC4-202ENST00000430200 MYL3P08590 195 aa13.74□□□□□ -0.21
HDAC4-202ENST00000430200 CYP2C9P11712 490 aa13.74□□□□□ -0.21
HDAC4-202ENST00000430200 DNAJB2P25686 324 aa13.74□□□□□ -0.21
HDAC4-202ENST00000430200 HOXA13P31271 388 aaPredicted RBP13.74□□□□□ -0.21
HDAC4-202ENST00000430200 NT5C2P49902 561 aa13.74□□□□□ -0.21
HDAC4-202ENST00000430200 CCL23P55773 120 aa13.74□□□□□ -0.21
HDAC4-202ENST00000430200 LY6KQ17RY6 165 aa13.74□□□□□ -0.21
HDAC4-202ENST00000430200 CCDC178Q5BJE1 867 aa13.74□□□□□ -0.21
HDAC4-202ENST00000430200 ZNF365Q70YC5 407 aa13.74□□□□□ -0.21
HDAC4-202ENST00000430200 HOMER1Q86YM7 354 aa13.74□□□□□ -0.21
HDAC4-202ENST00000430200 RGS22Q8NE09 1264 aa13.74□□□□□ -0.21
HDAC4-202ENST00000430200 SCFD2Q8WU76 684 aa13.74□□□□□ -0.21
HDAC4-202ENST00000430200 MAP4K1Q92918 833 aa13.74□□□□□ -0.21
HDAC4-202ENST00000430200 SCLYQ96I15 445 aa13.74□□□□□ -0.21
HDAC4-202ENST00000430200 ZFP91Q96JP5 570 aaPredicted RBP13.74□□□□□ -0.21
HDAC4-202ENST00000430200 PIGSQ96S52 555 aa13.74□□□□□ -0.21
HDAC4-202ENST00000430200 SEMA6BQ9H3T3 888 aa13.74□□□□□ -0.21
HDAC4-202ENST00000430200 U3KPZ7 1027 aaPredicted RBP13.74□□□□□ -0.21
HDAC4-202ENST00000430200 A6NJR5 290 aa13.73□□□□□ -0.21
HDAC4-202ENST00000430200 CABYRO75952 493 aa13.73□□□□□ -0.21
HDAC4-202ENST00000430200 TXNP10599 105 aaKnown RBP13.73□□□□□ -0.21
HDAC4-202ENST00000430200 KAT2BQ92831 832 aa13.73□□□□□ -0.21
HDAC4-202ENST00000430200 GPKOWQ92917 476 aaPredicted RBP eCLIP13.73□□□□□ -0.21
HDAC4-202ENST00000430200 RMDN3Q96TC7 470 aa13.73□□□□□ -0.21
HDAC4-202ENST00000430200 LY9Q9HBG7 655 aa13.73□□□□□ -0.21
HDAC4-202ENST00000430200 PXMP2Q9NR77 195 aa13.73□□□□□ -0.21
HDAC4-202ENST00000430200 WDR81Q562E7 1941 aa13.72□□□□□ -0.21
HDAC4-202ENST00000430200 LOXHD1Q8IVV2 1947 aa13.72□□□□□ -0.21
HDAC4-202ENST00000430200 IFIT3O14879 490 aaKnown RBP13.72□□□□□ -0.21
HDAC4-202ENST00000430200 ZBTB5O15062 677 aa13.72□□□□□ -0.21
HDAC4-202ENST00000430200 TLR3O15455 904 aaKnown RBP13.72□□□□□ -0.21
HDAC4-202ENST00000430200 CFBP00751 764 aa13.72□□□□□ -0.21
HDAC4-202ENST00000430200 MMP3P08254 477 aa13.72□□□□□ -0.21
HDAC4-202ENST00000430200 CPT1AP50416 773 aa13.72□□□□□ -0.21
HDAC4-202ENST00000430200 PPIGQ13427 754 aaKnown RBP eCLIP13.72□□□□□ -0.21
HDAC4-202ENST00000430200 NBPF20Q3BBV1 942 aa13.72□□□□□ -0.21
HDAC4-202ENST00000430200 SEPT14Q6ZU15 432 aa13.72□□□□□ -0.21
HDAC4-202ENST00000430200 SLC17A8Q8NDX2 589 aa13.72□□□□□ -0.21
HDAC4-202ENST00000430200 IGDCC4Q8TDY8 1250 aa13.72□□□□□ -0.21
HDAC4-202ENST00000430200 AFG1LQ8WV93 481 aa13.72□□□□□ -0.21
HDAC4-202ENST00000430200 MTG1Q9BT17 334 aaPredicted RBP13.72□□□□□ -0.21
HDAC4-202ENST00000430200 PBX4Q9BYU1 374 aa13.72□□□□□ -0.21
HDAC4-202ENST00000430200 RIOX1Q9H6W3 641 aa13.72□□□□□ -0.21
HDAC4-202ENST00000430200 IL23AQ9NPF7 189 aa13.72□□□□□ -0.21
HDAC4-202ENST00000430200 PNMA2Q9UL42 364 aa13.72□□□□□ -0.21
HDAC4-202ENST00000430200 SORBS3O60504 671 aa13.71□□□□□ -0.21
HDAC4-202ENST00000430200 HIC1Q14526 733 aa13.71□□□□□ -0.21
HDAC4-202ENST00000430200 GRIN2CQ14957 1233 aa13.71□□□□□ -0.21
HDAC4-202ENST00000430200 RAB11FIP4Q86YS3 637 aa13.71□□□□□ -0.21
HDAC4-202ENST00000430200 USP38Q8NB14 1042 aa13.71□□□□□ -0.21
HDAC4-202ENST00000430200 NSUN6Q8TEA1 469 aaKnown RBP13.71□□□□□ -0.21
HDAC4-202ENST00000430200 RUFY2Q8WXA3 655 aa13.71□□□□□ -0.21
HDAC4-202ENST00000430200 PIBF1Q8WXW3 757 aa13.71□□□□□ -0.21
HDAC4-202ENST00000430200 DHX38Q92620 1227 aaKnown RBP13.71□□□□□ -0.21
HDAC4-202ENST00000430200 PDCD2LQ9BRP1 358 aa13.71□□□□□ -0.21
HDAC4-202ENST00000430200 ESYT1Q9BSJ8 1104 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms