RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 COL4A5P29400 1685 aa18.18■□□□□ 0.5
MBD4-203ENST00000429544 MYMKA6NI61 221 aa18.17■□□□□ 0.5
MBD4-203ENST00000429544 TUBB4AP04350 444 aa18.17■□□□□ 0.5
MBD4-203ENST00000429544 FXR1P51114 621 aaKnown RBP eCLIP18.17■□□□□ 0.5
MBD4-203ENST00000429544 TRIM65Q6PJ69 517 aa18.17■□□□□ 0.5
MBD4-203ENST00000429544 HPS3Q969F9 1004 aa18.17■□□□□ 0.5
MBD4-203ENST00000429544 GMCL1Q96IK5 515 aa18.17■□□□□ 0.5
MBD4-203ENST00000429544 DUSP9Q99956 384 aaKnown RBP18.17■□□□□ 0.5
MBD4-203ENST00000429544 ANO3Q9BYT9 981 aa18.17■□□□□ 0.5
MBD4-203ENST00000429544 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.17■□□□□ 0.54e-12■■□□□ 11.8
MBD4-203ENST00000429544 SPDYE2BA6NHP3 402 aa18.17■□□□□ 0.5
MBD4-203ENST00000429544 PSMD14O00487 310 aa18.17■□□□□ 0.5
MBD4-203ENST00000429544 TPM1P09493 284 aa18.17■□□□□ 0.5
MBD4-203ENST00000429544 SPDYE6P0CI01 402 aa18.17■□□□□ 0.5
MBD4-203ENST00000429544 UBXN1Q04323 297 aa18.17■□□□□ 0.5
MBD4-203ENST00000429544 SYDE2Q5VT97 1194 aa18.17■□□□□ 0.5
MBD4-203ENST00000429544 MTERF4Q7Z6M4 381 aaKnown RBP18.17■□□□□ 0.5
MBD4-203ENST00000429544 LARGE2Q8N3Y3 721 aa18.17■□□□□ 0.5
MBD4-203ENST00000429544 RAD54LQ92698 747 aa18.17■□□□□ 0.5
MBD4-203ENST00000429544 P2RX5Q93086 422 aa18.17■□□□□ 0.5
MBD4-203ENST00000429544 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.17■□□□□ 0.5
MBD4-203ENST00000429544 ZNF277Q9NRM2 450 aaPredicted RBP18.17■□□□□ 0.5
MBD4-203ENST00000429544 ZNF215Q9UL58 517 aaPredicted RBP18.17■□□□□ 0.5
MBD4-203ENST00000429544 CCNE1P24864 410 aa18.16■□□□□ 0.5
MBD4-203ENST00000429544 TMEM119Q4V9L6 283 aa18.16■□□□□ 0.5
MBD4-203ENST00000429544 CNNM4Q6P4Q7 775 aa18.16■□□□□ 0.5
MBD4-203ENST00000429544 DYMQ7RTS9 669 aa18.16■□□□□ 0.5
MBD4-203ENST00000429544 KCNK18Q7Z418 384 aa18.16■□□□□ 0.5
MBD4-203ENST00000429544 CNGA4Q8IV77 575 aa18.16■□□□□ 0.5
MBD4-203ENST00000429544 ANKRD7Q92527 254 aa18.16■□□□□ 0.5
MBD4-203ENST00000429544 MAGEC2Q9UBF1 373 aaPredicted RBP18.16■□□□□ 0.5
MBD4-203ENST00000429544 TAL1P17542 331 aaPredicted RBP18.16■□□□□ 0.5
MBD4-203ENST00000429544 EEF1GP26641 437 aaKnown RBP18.16■□□□□ 0.5
MBD4-203ENST00000429544 SYCP1Q15431 976 aa18.16■□□□□ 0.5
MBD4-203ENST00000429544 USH1GQ495M9 461 aa18.16■□□□□ 0.5
MBD4-203ENST00000429544 RTKN2Q8IZC4 609 aa18.16■□□□□ 0.5
MBD4-203ENST00000429544 CSGALNACT2Q8N6G5 542 aa18.16■□□□□ 0.5
MBD4-203ENST00000429544 PHLPP2Q6ZVD8 1323 aa18.16■□□□□ 0.5
MBD4-203ENST00000429544 A0A1W2PRG0 241 aa18.15■□□□□ 0.5
MBD4-203ENST00000429544 PES1O00541 588 aaKnown RBP18.15■□□□□ 0.5
MBD4-203ENST00000429544 BMP3P12645 472 aa18.15■□□□□ 0.5
MBD4-203ENST00000429544 ANKRD40Q6AI12 368 aa18.15■□□□□ 0.5
MBD4-203ENST00000429544 RAD9BQ6WBX8 426 aa18.15■□□□□ 0.5
MBD4-203ENST00000429544 FBXO11Q86XK2 927 aa18.15■□□□□ 0.5
MBD4-203ENST00000429544 KIAA0895Q8NCT3 520 aa18.15■□□□□ 0.5
MBD4-203ENST00000429544 NOC3LQ8WTT2 800 aaKnown RBP18.15■□□□□ 0.5
MBD4-203ENST00000429544 NAP1L4Q99733 375 aaKnown RBP18.15■□□□□ 0.5
MBD4-203ENST00000429544 AMNQ9BXJ7 453 aa18.15■□□□□ 0.5
MBD4-203ENST00000429544 NAA15Q9BXJ9 866 aaKnown RBP18.15■□□□□ 0.5
MBD4-203ENST00000429544 SLC39A2Q9NP94 309 aa18.15■□□□□ 0.5
MBD4-203ENST00000429544 BICDL2A1A5D9 508 aa18.15■□□□□ 0.5
MBD4-203ENST00000429544 LGALS16A8MUM7 142 aa18.15■□□□□ 0.5
MBD4-203ENST00000429544 DLGAP5Q15398 846 aa18.15■□□□□ 0.5
MBD4-203ENST00000429544 ECM1Q16610 540 aa18.15■□□□□ 0.5
MBD4-203ENST00000429544 SPICE1Q8N0Z3 855 aa18.15■□□□□ 0.5
MBD4-203ENST00000429544 GTPBP4Q9BZE4 634 aaKnown RBP18.15■□□□□ 0.5
MBD4-203ENST00000429544 ZNF70Q9UC06 446 aaPredicted RBP18.15■□□□□ 0.5
MBD4-203ENST00000429544 PCDHA12Q9UN75 941 aa18.15■□□□□ 0.5
MBD4-203ENST00000429544 ZBTB12Q9Y330 459 aaPredicted RBP18.15■□□□□ 0.5
MBD4-203ENST00000429544 GOLGA6L9A6NEM1 432 aa18.14■□□□□ 0.5
MBD4-203ENST00000429544 MEIS2O14770 477 aa18.14■□□□□ 0.5
MBD4-203ENST00000429544 SLU7O95391 586 aaKnown RBP18.14■□□□□ 0.5
MBD4-203ENST00000429544 DPEP1P16444 411 aa18.14■□□□□ 0.5
MBD4-203ENST00000429544 UNC13DQ70J99 1090 aa18.14■□□□□ 0.5
MBD4-203ENST00000429544 CCDC51Q96ER9 411 aa18.14■□□□□ 0.5
MBD4-203ENST00000429544 EEF2KMTQ96G04 330 aa18.14■□□□□ 0.5
MBD4-203ENST00000429544 PSMD1Q99460 953 aa18.14■□□□□ 0.5
MBD4-203ENST00000429544 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.14■□□□□ 0.5
MBD4-203ENST00000429544 HERC5Q9UII4 1024 aaKnown RBP18.14■□□□□ 0.5
MBD4-203ENST00000429544 HDAC9Q9UKV0 1011 aa18.14■□□□□ 0.5
MBD4-203ENST00000429544 V9GYY5 206 aaPredicted RBP18.14■□□□□ 0.5
MBD4-203ENST00000429544 RNF225M0QZC1 329 aaPredicted RBP18.14■□□□□ 0.49
MBD4-203ENST00000429544 VIL1P09327 827 aaKnown RBP18.14■□□□□ 0.49
MBD4-203ENST00000429544 PPP1R2P41236 205 aa18.14■□□□□ 0.49
MBD4-203ENST00000429544 TRIM14Q14142 442 aa18.14■□□□□ 0.49
MBD4-203ENST00000429544 GRIPAP1Q4V328 841 aa18.14■□□□□ 0.49
MBD4-203ENST00000429544 MB21D1Q8N884 522 aa18.14■□□□□ 0.49
MBD4-203ENST00000429544 GMLQ99445 158 aa18.14■□□□□ 0.49
MBD4-203ENST00000429544 P2RX7Q99572 595 aaKnown RBP18.14■□□□□ 0.49
MBD4-203ENST00000429544 ARID3AQ99856 593 aa18.14■□□□□ 0.49
MBD4-203ENST00000429544 L2HGDHQ9H9P8 463 aa18.14■□□□□ 0.49
MBD4-203ENST00000429544 FANCGO15287 622 aa18.13■□□□□ 0.49
MBD4-203ENST00000429544 AP3B2Q13367 1082 aa18.13■□□□□ 0.49
MBD4-203ENST00000429544 PVALEFA0A1B0GWK0 134 aa18.13■□□□□ 0.49
MBD4-203ENST00000429544 PRKCSHP14314 528 aaPredicted RBP18.13■□□□□ 0.49
MBD4-203ENST00000429544 IDEP14735 1019 aa18.13■□□□□ 0.49
MBD4-203ENST00000429544 ECE1P42892 770 aa18.13■□□□□ 0.49
MBD4-203ENST00000429544 USP11P51784 963 aa18.13■□□□□ 0.49
MBD4-203ENST00000429544 ERO1AQ96HE7 468 aa18.13■□□□□ 0.49
MBD4-203ENST00000429544 CNOT6LQ96LI5 555 aaKnown RBP18.13■□□□□ 0.49
MBD4-203ENST00000429544 MRPL44Q9H9J2 332 aaKnown RBP18.13■□□□□ 0.49
MBD4-203ENST00000429544 ABHD10Q9NUJ1 306 aa18.13■□□□□ 0.49
MBD4-203ENST00000429544 SMCHD1A6NHR9 2005 aa18.12■□□□□ 0.49
MBD4-203ENST00000429544 CNTNAP1P78357 1384 aa18.12■□□□□ 0.49
MBD4-203ENST00000429544 CCDC175P0C221 793 aa18.12■□□□□ 0.49
MBD4-203ENST00000429544 ARHGAP4P98171 946 aa18.12■□□□□ 0.49
MBD4-203ENST00000429544 COBLL1Q53SF7 1204 aa18.12■□□□□ 0.49
MBD4-203ENST00000429544 FAM151AQ8WW52 585 aa18.12■□□□□ 0.49
MBD4-203ENST00000429544 DDX12PQ92771 950 aa18.12■□□□□ 0.49
MBD4-203ENST00000429544 SEMA6BQ9H3T3 888 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms