RNA–Protein interactions for RNA: ENST00000428835.5

HLA-DPB1-212, Transcript of major histocompatibility complex, class II, DP beta 1, humanhuman

APPRIS ALT2

Gene HLA-DPB1, Length 688 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1-212ENST00000428835 PFKFB3Q16875 520 aaPredicted RBP23.31■■□□□ 1.32
HLA-DPB1-212ENST00000428835 USP17L6PQ6QN14 398 aa23.31■■□□□ 1.32
HLA-DPB1-212ENST00000428835 ZNF713Q8N859 430 aaPredicted RBP23.31■■□□□ 1.32
HLA-DPB1-212ENST00000428835 IWS1Q96ST2 819 aa23.31■■□□□ 1.32
HLA-DPB1-212ENST00000428835 KIF2CQ99661 725 aa23.31■■□□□ 1.32
HLA-DPB1-212ENST00000428835 PXMP2Q9NR77 195 aa23.31■■□□□ 1.32
HLA-DPB1-212ENST00000428835 PFKFB2O60825 505 aa23.3■■□□□ 1.32
HLA-DPB1-212ENST00000428835 MYCNP04198 464 aaPredicted RBP23.3■■□□□ 1.32
HLA-DPB1-212ENST00000428835 SCG2P13521 617 aa23.3■■□□□ 1.32
HLA-DPB1-212ENST00000428835 MLLT1Q03111 559 aaPredicted RBP23.3■■□□□ 1.32
HLA-DPB1-212ENST00000428835 SSRP1Q08945 709 aaKnown RBP23.3■■□□□ 1.32
HLA-DPB1-212ENST00000428835 TRIM22Q8IYM9 498 aa23.3■■□□□ 1.32
HLA-DPB1-212ENST00000428835 ARRDC4Q8NCT1 418 aa23.3■■□□□ 1.32
HLA-DPB1-212ENST00000428835 RNF26Q9BY78 433 aaPredicted RBP23.3■■□□□ 1.32
HLA-DPB1-212ENST00000428835 XPNPEP3Q9NQH7 507 aa23.3■■□□□ 1.32
HLA-DPB1-212ENST00000428835 PDGFCQ9NRA1 345 aa23.3■■□□□ 1.32
HLA-DPB1-212ENST00000428835 BARHL2Q9NY43 387 aa23.3■■□□□ 1.32
HLA-DPB1-212ENST00000428835 LCTP09848 1927 aa23.29■■□□□ 1.32
HLA-DPB1-212ENST00000428835 STXBP3O00186 592 aa23.29■■□□□ 1.32
HLA-DPB1-212ENST00000428835 PIK3CDO00329 1044 aa23.29■■□□□ 1.32
HLA-DPB1-212ENST00000428835 MEIS2O14770 477 aa23.29■■□□□ 1.32
HLA-DPB1-212ENST00000428835 ADCYAP1R1P41586 468 aa23.29■■□□□ 1.32
HLA-DPB1-212ENST00000428835 TNFAIP2Q03169 654 aa23.29■■□□□ 1.32
HLA-DPB1-212ENST00000428835 SCRN1Q12765 414 aa23.29■■□□□ 1.32
HLA-DPB1-212ENST00000428835 STXBP2Q15833 593 aa23.29■■□□□ 1.32
HLA-DPB1-212ENST00000428835 IQSEC1Q6DN90 963 aa23.29■■□□□ 1.32
HLA-DPB1-212ENST00000428835 TAPT1Q6NXT6 567 aa23.29■■□□□ 1.32
HLA-DPB1-212ENST00000428835 PPP1R18Q6NYC8 613 aa23.29■■□□□ 1.32
HLA-DPB1-212ENST00000428835 LENG1Q96BZ8 264 aaPredicted RBP23.29■■□□□ 1.32
HLA-DPB1-212ENST00000428835 BACH2Q9BYV9 841 aa23.29■■□□□ 1.32
HLA-DPB1-212ENST00000428835 BRCA2P51587 3418 aa23.29■■□□□ 1.32
HLA-DPB1-212ENST00000428835 MCM3APO60318 1980 aa23.29■■□□□ 1.32
HLA-DPB1-212ENST00000428835 DUSP11O75319 330 aaKnown RBP23.28■■□□□ 1.32
HLA-DPB1-212ENST00000428835 NR3C2P08235 984 aa23.28■■□□□ 1.32
HLA-DPB1-212ENST00000428835 PKN1Q16512 942 aa23.28■■□□□ 1.32
HLA-DPB1-212ENST00000428835 ME3Q16798 604 aa23.28■■□□□ 1.32
HLA-DPB1-212ENST00000428835 TYW1BQ6NUM6 668 aa23.28■■□□□ 1.32
HLA-DPB1-212ENST00000428835 PAWRQ96IZ0 340 aaKnown RBP23.28■■□□□ 1.32
HLA-DPB1-212ENST00000428835 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.27■■□□□ 1.32
HLA-DPB1-212ENST00000428835 SMCO2A6NFE2 343 aa23.27■■□□□ 1.32
HLA-DPB1-212ENST00000428835 CDKL5O76039 1030 aa23.27■■□□□ 1.32
HLA-DPB1-212ENST00000428835 PGK1P00558 417 aa23.27■■□□□ 1.32
HLA-DPB1-212ENST00000428835 MYCLP12524 364 aaPredicted RBP23.27■■□□□ 1.32
HLA-DPB1-212ENST00000428835 RABEP1Q15276 862 aa23.27■■□□□ 1.32
HLA-DPB1-212ENST00000428835 GJC2Q5T442 439 aaPredicted RBP23.27■■□□□ 1.32
HLA-DPB1-212ENST00000428835 NECAB2Q7Z6G3 386 aa23.27■■□□□ 1.32
HLA-DPB1-212ENST00000428835 DIS3LQ8TF46 1054 aaKnown RBP23.27■■□□□ 1.32
HLA-DPB1-212ENST00000428835 PDCD2LQ9BRP1 358 aa23.27■■□□□ 1.32
HLA-DPB1-212ENST00000428835 ADCY6O43306 1168 aa23.26■■□□□ 1.31
HLA-DPB1-212ENST00000428835 MNX1P50219 401 aaPredicted RBP23.26■■□□□ 1.31
HLA-DPB1-212ENST00000428835 ADCY7P51828 1080 aa23.26■■□□□ 1.31
HLA-DPB1-212ENST00000428835 PGM5Q15124 567 aa23.26■■□□□ 1.31
HLA-DPB1-212ENST00000428835 UBE2SQ16763 222 aa23.26■■□□□ 1.31
HLA-DPB1-212ENST00000428835 UBE2Q1Q7Z7E8 422 aa23.26■■□□□ 1.31
HLA-DPB1-212ENST00000428835 NECAB1Q8N987 351 aa23.26■■□□□ 1.31
HLA-DPB1-212ENST00000428835 CCDC12Q8WUD4 166 aaPredicted RBP23.26■■□□□ 1.31
HLA-DPB1-212ENST00000428835 TBC1D32Q96NH3 1257 aa23.26■■□□□ 1.31
HLA-DPB1-212ENST00000428835 WDR11Q9BZH6 1224 aa23.26■■□□□ 1.31
HLA-DPB1-212ENST00000428835 SPC25Q9HBM1 224 aa23.26■■□□□ 1.31
HLA-DPB1-212ENST00000428835 RIC8AQ9NPQ8 531 aa23.26■■□□□ 1.31
HLA-DPB1-212ENST00000428835 KBTBD13C9JR72 458 aa23.25■■□□□ 1.31
HLA-DPB1-212ENST00000428835 DNM1LO00429 736 aa23.25■■□□□ 1.31
HLA-DPB1-212ENST00000428835 EIF3JO75822 258 aaKnown RBP23.25■■□□□ 1.31
HLA-DPB1-212ENST00000428835 SMPD1P17405 629 aa23.25■■□□□ 1.31
HLA-DPB1-212ENST00000428835 LRRC41Q15345 812 aa23.25■■□□□ 1.31
HLA-DPB1-212ENST00000428835 SEPT14Q6ZU15 432 aa23.25■■□□□ 1.31
HLA-DPB1-212ENST00000428835 RNF180Q86T96 592 aa23.25■■□□□ 1.31
HLA-DPB1-212ENST00000428835 SCFD2Q8WU76 684 aa23.25■■□□□ 1.31
HLA-DPB1-212ENST00000428835 GLT8D2Q9H1C3 349 aa23.25■■□□□ 1.31
HLA-DPB1-212ENST00000428835 C11orf49Q9H6J7 331 aa23.25■■□□□ 1.31
HLA-DPB1-212ENST00000428835 LIMCH1Q9UPQ0 1083 aa23.25■■□□□ 1.31
HLA-DPB1-212ENST00000428835 RBM47A0AV96 593 aaKnown RBP23.24■■□□□ 1.31
HLA-DPB1-212ENST00000428835 SPDYE3A6NKU9 549 aa23.24■■□□□ 1.31
HLA-DPB1-212ENST00000428835 DEXIO95424 95 aa23.24■■□□□ 1.31
HLA-DPB1-212ENST00000428835 LARGE1O95461 756 aa23.24■■□□□ 1.31
HLA-DPB1-212ENST00000428835 CCND2P30279 289 aa23.24■■□□□ 1.31
HLA-DPB1-212ENST00000428835 VSIG10LQ86VR7 867 aa23.24■■□□□ 1.31
HLA-DPB1-212ENST00000428835 TEX2Q8IWB9 1127 aa23.24■■□□□ 1.31
HLA-DPB1-212ENST00000428835 GNEQ9Y223 722 aaKnown RBP23.24■■□□□ 1.31
HLA-DPB1-212ENST00000428835 SYNRGQ9UMZ2 1314 aa23.24■■□□□ 1.31
HLA-DPB1-212ENST00000428835 TTLL4Q14679 1199 aa23.23■■□□□ 1.31
HLA-DPB1-212ENST00000428835 DUSP28Q4G0W2 176 aa23.23■■□□□ 1.31
HLA-DPB1-212ENST00000428835 IL31RAQ8NI17 732 aa23.23■■□□□ 1.31
HLA-DPB1-212ENST00000428835 GTF3C6Q969F1 213 aa23.23■■□□□ 1.31
HLA-DPB1-212ENST00000428835 AP5M1Q9H0R1 490 aa23.23■■□□□ 1.31
HLA-DPB1-212ENST00000428835 C6orf50Q9HD87 102 aa23.23■■□□□ 1.31
HLA-DPB1-212ENST00000428835 PCDHA6Q9UN73 950 aa23.23■■□□□ 1.31
HLA-DPB1-212ENST00000428835 PCDHA8Q9Y5H6 950 aa23.23■■□□□ 1.31
HLA-DPB1-212ENST00000428835 DYNC1LI2O43237 492 aaPredicted RBP23.22■■□□□ 1.31
HLA-DPB1-212ENST00000428835 ADAMTS4O75173 837 aa23.22■■□□□ 1.31
HLA-DPB1-212ENST00000428835 C6orf222P0C671 652 aaPredicted RBP23.22■■□□□ 1.31
HLA-DPB1-212ENST00000428835 TXNP10599 105 aaKnown RBP23.22■■□□□ 1.31
HLA-DPB1-212ENST00000428835 GJA9P57773 515 aa23.22■■□□□ 1.31
HLA-DPB1-212ENST00000428835 TMEM63BQ5T3F8 832 aa23.22■■□□□ 1.31
HLA-DPB1-212ENST00000428835 TLK2Q86UE8 772 aa23.22■■□□□ 1.31
HLA-DPB1-212ENST00000428835 CCDC148Q8NFR7 591 aa23.22■■□□□ 1.31
HLA-DPB1-212ENST00000428835 ZFP91Q96JP5 570 aaPredicted RBP23.22■■□□□ 1.31
HLA-DPB1-212ENST00000428835 ZMYND12Q9H0C1 365 aa23.22■■□□□ 1.31
HLA-DPB1-212ENST00000428835 VPS54Q9P1Q0 977 aa23.22■■□□□ 1.31
HLA-DPB1-212ENST00000428835 Q9Y3F1 56 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms