RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 LMAN1P49257 510 aa12.86□□□□□ -0.35
CECR3-201ENST00000428828 STAT2P52630 851 aa12.86□□□□□ -0.35
CECR3-201ENST00000428828 FOSBP53539 338 aa12.86□□□□□ -0.35
CECR3-201ENST00000428828 SNAP25P60880 206 aa12.86□□□□□ -0.35
CECR3-201ENST00000428828 NTRK3Q16288 839 aa12.86□□□□□ -0.35
CECR3-201ENST00000428828 SH3D19Q5HYK7 790 aa12.86□□□□□ -0.35
CECR3-201ENST00000428828 E4F1Q66K89 784 aaPredicted RBP12.86□□□□□ -0.35
CECR3-201ENST00000428828 CYP4F22Q6NT55 531 aa12.86□□□□□ -0.35
CECR3-201ENST00000428828 EGFL6Q8IUX8 553 aa12.86□□□□□ -0.35
CECR3-201ENST00000428828 KIFC2Q96AC6 838 aa12.86□□□□□ -0.35
CECR3-201ENST00000428828 A0A087WUV0 522 aaPredicted RBP12.85□□□□□ -0.35
CECR3-201ENST00000428828 CCL15-CCL14A0A0B4J2E2 113 aa12.85□□□□□ -0.35
CECR3-201ENST00000428828 CYTH3O43739 400 aa12.85□□□□□ -0.35
CECR3-201ENST00000428828 FLOT1O75955 427 aa12.85□□□□□ -0.35
CECR3-201ENST00000428828 CDKL5O76039 1030 aa12.85□□□□□ -0.35
CECR3-201ENST00000428828 SLC10A3P09131 477 aa12.85□□□□□ -0.35
CECR3-201ENST00000428828 MAP2K2P36507 400 aa12.85□□□□□ -0.35
CECR3-201ENST00000428828 GNAQP50148 359 aa12.85□□□□□ -0.35
CECR3-201ENST00000428828 GTF2A2P52657 109 aa12.85□□□□□ -0.35
CECR3-201ENST00000428828 PPP2R5BQ15173 497 aa12.85□□□□□ -0.35
CECR3-201ENST00000428828 CCL15Q16663 113 aa12.85□□□□□ -0.35
CECR3-201ENST00000428828 SLC35G1Q2M3R5 365 aa12.85□□□□□ -0.35
CECR3-201ENST00000428828 CNPY4Q8N129 248 aa12.85□□□□□ -0.35
CECR3-201ENST00000428828 ANKRD20A12PQ8NF67 263 aa12.85□□□□□ -0.35
CECR3-201ENST00000428828 HNRNPLLQ8WVV9 542 aaKnown RBP12.85□□□□□ -0.35
CECR3-201ENST00000428828 C12orf42Q96LP6 360 aa12.85□□□□□ -0.35
CECR3-201ENST00000428828 FUT8Q9BYC5 575 aa12.85□□□□□ -0.35
CECR3-201ENST00000428828 A1CFQ9NQ94 594 aaKnown RBP12.85□□□□□ -0.35
CECR3-201ENST00000428828 CREBZFQ9NS37 354 aa12.85□□□□□ -0.35
CECR3-201ENST00000428828 CCDC151A5D8V7 595 aa12.84□□□□□ -0.35
CECR3-201ENST00000428828 IFNAR1P17181 557 aa12.84□□□□□ -0.35
CECR3-201ENST00000428828 LIG1P18858 919 aa12.84□□□□□ -0.35
CECR3-201ENST00000428828 CALRP27797 417 aaKnown RBP12.84□□□□□ -0.35
CECR3-201ENST00000428828 GJB2P29033 226 aa12.84□□□□□ -0.35
CECR3-201ENST00000428828 TUBB4BP68371 445 aa12.84□□□□□ -0.35
CECR3-201ENST00000428828 SSRP1Q08945 709 aaKnown RBP12.84□□□□□ -0.35
CECR3-201ENST00000428828 BRD3Q15059 726 aa12.84□□□□□ -0.35
CECR3-201ENST00000428828 SYDE2Q5VT97 1194 aa12.84□□□□□ -0.35
CECR3-201ENST00000428828 TRIM22Q8IYM9 498 aa12.84□□□□□ -0.35
CECR3-201ENST00000428828 ADGRF4Q8IZF3 695 aa12.84□□□□□ -0.35
CECR3-201ENST00000428828 GPATCH11Q8N954 259 aa12.84□□□□□ -0.35
CECR3-201ENST00000428828 PROCA1Q8NCQ7 364 aaPredicted RBP12.84□□□□□ -0.35
CECR3-201ENST00000428828 DACT1Q9NYF0 836 aa12.84□□□□□ -0.35
CECR3-201ENST00000428828 SUFUQ9UMX1 484 aa12.84□□□□□ -0.35
CECR3-201ENST00000428828 A0A0G2JMZ2 1700 aa12.84□□□□□ -0.35
CECR3-201ENST00000428828 RBBP6Q7Z6E9 1792 aaKnown RBP12.84□□□□□ -0.35
CECR3-201ENST00000428828 CETPP11597 493 aa12.84□□□□□ -0.35
CECR3-201ENST00000428828 PDCP20941 246 aa12.84□□□□□ -0.35
CECR3-201ENST00000428828 AKAP17AQ02040 695 aaKnown RBP12.84□□□□□ -0.35
CECR3-201ENST00000428828 MOGSQ13724 837 aa12.84□□□□□ -0.35
CECR3-201ENST00000428828 FASTKD5Q7L8L6 764 aaKnown RBP12.84□□□□□ -0.35
CECR3-201ENST00000428828 RABGGTAQ92696 567 aa12.84□□□□□ -0.35
CECR3-201ENST00000428828 MS4A4AQ96JQ5 239 aa12.84□□□□□ -0.35
CECR3-201ENST00000428828 PIGSQ96S52 555 aa12.84□□□□□ -0.35
CECR3-201ENST00000428828 LZTS2Q9BRK4 669 aa12.84□□□□□ -0.35
CECR3-201ENST00000428828 TRMT1Q9NXH9 659 aaKnown RBP12.84□□□□□ -0.35
CECR3-201ENST00000428828 FEM1BQ9UK73 627 aa12.84□□□□□ -0.35
CECR3-201ENST00000428828 PRR12Q9ULL5 1215 aa12.84□□□□□ -0.35
CECR3-201ENST00000428828 V9GY48 417 aaPredicted RBP12.84□□□□□ -0.35
CECR3-201ENST00000428828 FAM155AB1AL88 458 aaPredicted RBP12.83□□□□□ -0.36
CECR3-201ENST00000428828 USP17L15C9J2P7 530 aa12.83□□□□□ -0.36
CECR3-201ENST00000428828 USP17L13C9JLJ4 530 aa12.83□□□□□ -0.36
CECR3-201ENST00000428828 USP17L11C9JVI0 530 aa12.83□□□□□ -0.36
CECR3-201ENST00000428828 USP17L18D6R9N7 530 aa12.83□□□□□ -0.36
CECR3-201ENST00000428828 USP17L22D6RA61 530 aa12.83□□□□□ -0.36
CECR3-201ENST00000428828 USP17L17D6RBQ6 530 aa12.83□□□□□ -0.36
CECR3-201ENST00000428828 USP17L19D6RCP7 530 aa12.83□□□□□ -0.36
CECR3-201ENST00000428828 USP17L20D6RJB6 530 aa12.83□□□□□ -0.36
CECR3-201ENST00000428828 FMNL1O95466 1100 aaPredicted RBP12.83□□□□□ -0.36
CECR3-201ENST00000428828 USP17L24Q0WX57 530 aa12.83□□□□□ -0.36
CECR3-201ENST00000428828 FUT2Q10981 343 aa12.83□□□□□ -0.36
CECR3-201ENST00000428828 DEFB115Q30KQ5 88 aa12.83□□□□□ -0.36
CECR3-201ENST00000428828 FCHSD1Q86WN1 690 aa12.83□□□□□ -0.36
CECR3-201ENST00000428828 CHURC1Q8WUH1 139 aa12.83□□□□□ -0.36
CECR3-201ENST00000428828 BRI3BPQ8WY22 251 aa12.83□□□□□ -0.36
CECR3-201ENST00000428828 AIFM3Q96NN9 605 aa12.83□□□□□ -0.36
CECR3-201ENST00000428828 SLF1Q9BQI6 1058 aa12.83□□□□□ -0.36
CECR3-201ENST00000428828 LLPHQ9BRT6 129 aaKnown RBP12.83□□□□□ -0.36
CECR3-201ENST00000428828 SPZ1Q9BXG8 430 aa12.83□□□□□ -0.36
CECR3-201ENST00000428828 SEC63Q9UGP8 760 aaKnown RBP12.83□□□□□ -0.36
CECR3-201ENST00000428828 AGTPBP1Q9UPW5 1226 aa12.83□□□□□ -0.36
CECR3-201ENST00000428828 CDC37Q16543 378 aaPredicted RBP12.82□□□□□ -0.36
CECR3-201ENST00000428828 STX1AQ16623 288 aa12.82□□□□□ -0.36
CECR3-201ENST00000428828 CCDC174Q6PII3 467 aa12.82□□□□□ -0.36
CECR3-201ENST00000428828 CATSPERGQ6ZRH7 1159 aa12.82□□□□□ -0.36
CECR3-201ENST00000428828 TADA2BQ86TJ2 420 aa12.82□□□□□ -0.36
CECR3-201ENST00000428828 FAM160B2Q86V87 743 aa12.82□□□□□ -0.36
CECR3-201ENST00000428828 SMARCC2Q8TAQ2 1214 aa12.82□□□□□ -0.36
CECR3-201ENST00000428828 GPKOWQ92917 476 aaPredicted RBP eCLIP12.82□□□□□ -0.36
CECR3-201ENST00000428828 CCDC102AQ96A19 550 aa12.82□□□□□ -0.36
CECR3-201ENST00000428828 ATG4CQ96DT6 458 aa12.82□□□□□ -0.36
CECR3-201ENST00000428828 RRP36Q96EU6 259 aaKnown RBP12.82□□□□□ -0.36
CECR3-201ENST00000428828 ZIC5Q96T25 663 aa12.82□□□□□ -0.36
CECR3-201ENST00000428828 RNF26Q9BY78 433 aaPredicted RBP12.82□□□□□ -0.36
CECR3-201ENST00000428828 DNAJC25Q9H1X3 360 aa12.82□□□□□ -0.36
CECR3-201ENST00000428828 JMJD4Q9H9V9 463 aa12.82□□□□□ -0.36
CECR3-201ENST00000428828 ZCCHC17Q9NP64 241 aaKnown RBP12.82□□□□□ -0.36
CECR3-201ENST00000428828 CCDC189A1A4V9 331 aa12.82□□□□□ -0.36
CECR3-201ENST00000428828 BTBD19C9JJ37 291 aa12.82□□□□□ -0.36
CECR3-201ENST00000428828 FDPSP14324 419 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms