RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 JMJD4Q9H9V9 463 aa19.93■□□□□ 0.78
TRIM39-209ENST00000428728 IL23AQ9NPF7 189 aa19.93■□□□□ 0.78
TRIM39-209ENST00000428728 GPHNQ9NQX3 736 aaPredicted RBP19.93■□□□□ 0.78
TRIM39-209ENST00000428728 COL20A1Q9P218 1284 aa19.93■□□□□ 0.78
TRIM39-209ENST00000428728 CDH23Q9H251 3354 aa19.92■□□□□ 0.78
TRIM39-209ENST00000428728 TMEM265A0A087WTH1 108 aa19.92■□□□□ 0.78
TRIM39-209ENST00000428728 GRXCR1A8MXD5 290 aa19.92■□□□□ 0.78
TRIM39-209ENST00000428728 NKRFO15226 690 aaKnown RBP eCLIP19.92■□□□□ 0.78
TRIM39-209ENST00000428728 ARIH2O95376 493 aa19.92■□□□□ 0.78
TRIM39-209ENST00000428728 TXNP10599 105 aaKnown RBP19.92■□□□□ 0.78
TRIM39-209ENST00000428728 FOSL2P15408 326 aa19.92■□□□□ 0.78
TRIM39-209ENST00000428728 RGS22Q8NE09 1264 aa19.92■□□□□ 0.78
TRIM39-209ENST00000428728 SYTL5Q8TDW5 730 aaPredicted RBP19.92■□□□□ 0.78
TRIM39-209ENST00000428728 RUFY2Q8WXA3 655 aa19.92■□□□□ 0.78
TRIM39-209ENST00000428728 TAAR1Q96RJ0 339 aa19.92■□□□□ 0.78
TRIM39-209ENST00000428728 MTG1Q9BT17 334 aaPredicted RBP19.92■□□□□ 0.78
TRIM39-209ENST00000428728 SEZ6LQ9BYH1 1024 aa19.92■□□□□ 0.78
TRIM39-209ENST00000428728 TRMT13Q9NUP7 481 aaKnown RBP19.92■□□□□ 0.78
TRIM39-209ENST00000428728 DOCK5Q9H7D0 1870 aa19.91■□□□□ 0.78
TRIM39-209ENST00000428728 CHMLP26374 656 aa19.91■□□□□ 0.78
TRIM39-209ENST00000428728 PBX2P40425 430 aa19.91■□□□□ 0.78
TRIM39-209ENST00000428728 PTH1RQ03431 593 aa19.91■□□□□ 0.78
TRIM39-209ENST00000428728 TRDNQ13061 729 aa19.91■□□□□ 0.78
TRIM39-209ENST00000428728 TTLL4Q14679 1199 aa19.91■□□□□ 0.78
TRIM39-209ENST00000428728 SEC23AQ15436 765 aa19.91■□□□□ 0.78
TRIM39-209ENST00000428728 BRDTQ58F21 947 aaPredicted RBP19.91■□□□□ 0.78
TRIM39-209ENST00000428728 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.91■□□□□ 0.78
TRIM39-209ENST00000428728 TIFAQ96CG3 184 aa19.91■□□□□ 0.78
TRIM39-209ENST00000428728 WNT8AQ9H1J5 351 aa19.91■□□□□ 0.78
TRIM39-209ENST00000428728 MRPL11Q9Y3B7 192 aaKnown RBP19.91■□□□□ 0.78
TRIM39-209ENST00000428728 CYP2C9P11712 490 aa19.9■□□□□ 0.78
TRIM39-209ENST00000428728 CHMP4BP1P59074 171 aa19.9■□□□□ 0.78
TRIM39-209ENST00000428728 RASIP1Q5U651 963 aa19.9■□□□□ 0.78
TRIM39-209ENST00000428728 SEPT14Q6ZU15 432 aa19.9■□□□□ 0.78
TRIM39-209ENST00000428728 MCF2L2Q86YR7 1114 aa19.9■□□□□ 0.78
TRIM39-209ENST00000428728 SCLYQ96I15 445 aa19.9■□□□□ 0.78
TRIM39-209ENST00000428728 RMDN3Q96TC7 470 aa19.9■□□□□ 0.78
TRIM39-209ENST00000428728 KLRF2D3W0D1 207 aa19.89■□□□□ 0.77
TRIM39-209ENST00000428728 CFBP00751 764 aa19.89■□□□□ 0.77
TRIM39-209ENST00000428728 CYP21A2P08686 494 aa19.89■□□□□ 0.77
TRIM39-209ENST00000428728 EIF2AK2P19525 551 aaKnown RBP19.89■□□□□ 0.77
TRIM39-209ENST00000428728 GRIN2CQ14957 1233 aa19.89■□□□□ 0.77
TRIM39-209ENST00000428728 NBPF20Q3BBV1 942 aa19.89■□□□□ 0.77
TRIM39-209ENST00000428728 OTOP2Q7RTS6 562 aa19.89■□□□□ 0.77
TRIM39-209ENST00000428728 NSUN6Q8TEA1 469 aaKnown RBP19.89■□□□□ 0.77
TRIM39-209ENST00000428728 PBX4Q9BYU1 374 aa19.89■□□□□ 0.77
TRIM39-209ENST00000428728 MTIF3Q9H2K0 278 aaKnown RBP19.89■□□□□ 0.77
TRIM39-209ENST00000428728 ZNF576Q9H609 170 aa19.89■□□□□ 0.77
TRIM39-209ENST00000428728 CXXC1Q9P0U4 656 aaPredicted RBP19.89■□□□□ 0.77
TRIM39-209ENST00000428728 TAF6LQ9Y6J9 622 aa19.89■□□□□ 0.77
TRIM39-209ENST00000428728 U3KPZ7 1027 aaPredicted RBP19.89■□□□□ 0.77
TRIM39-209ENST00000428728 EYSQ5T1H1 3165 aa19.88■□□□□ 0.77
TRIM39-209ENST00000428728 A6NJR5 290 aa19.88■□□□□ 0.77
TRIM39-209ENST00000428728 IFIT3O14879 490 aaKnown RBP19.88■□□□□ 0.77
TRIM39-209ENST00000428728 FGBP02675 491 aa19.88■□□□□ 0.77
TRIM39-209ENST00000428728 LY6KQ17RY6 165 aa19.88■□□□□ 0.77
TRIM39-209ENST00000428728 ARHGEF16Q5VV41 709 aa19.88■□□□□ 0.77
TRIM39-209ENST00000428728 CHST3Q7LGC8 479 aa19.88■□□□□ 0.77
TRIM39-209ENST00000428728 RALYLQ86SE5 291 aaKnown RBP19.88■□□□□ 0.77
TRIM39-209ENST00000428728 HOMER1Q86YM7 354 aa19.88■□□□□ 0.77
TRIM39-209ENST00000428728 HERVK_113Q902F9 699 aa19.88■□□□□ 0.77
TRIM39-209ENST00000428728 AMNQ9BXJ7 453 aa19.88■□□□□ 0.77
TRIM39-209ENST00000428728 MAD2L2Q9UI95 211 aa19.88■□□□□ 0.77
TRIM39-209ENST00000428728 PTPRSQ13332 1948 aa19.88■□□□□ 0.77
TRIM39-209ENST00000428728 TET1Q8NFU7 2136 aa19.87■□□□□ 0.77
TRIM39-209ENST00000428728 PPP1R11O60927 126 aaPredicted RBP19.87■□□□□ 0.77
TRIM39-209ENST00000428728 SUPT20HL2P0C7V6 817 aa19.87■□□□□ 0.77
TRIM39-209ENST00000428728 STXBP2Q15833 593 aa19.87■□□□□ 0.77
TRIM39-209ENST00000428728 CCDC62Q6P9F0 684 aa19.87■□□□□ 0.77
TRIM39-209ENST00000428728 AFG1LQ8WV93 481 aa19.87■□□□□ 0.77
TRIM39-209ENST00000428728 MAF1Q9H063 256 aa19.87■□□□□ 0.77
TRIM39-209ENST00000428728 SENP2Q9HC62 589 aa19.87■□□□□ 0.77
TRIM39-209ENST00000428728 PXMP2Q9NR77 195 aa19.87■□□□□ 0.77
TRIM39-209ENST00000428728 UNC80Q8N2C7 3258 aa19.86■□□□□ 0.77
TRIM39-209ENST00000428728 ERICH2A1L162 156 aa19.86■□□□□ 0.77
TRIM39-209ENST00000428728 PALM3A6NDB9 673 aaPredicted RBP19.86■□□□□ 0.77
TRIM39-209ENST00000428728 E7EWF7 191 aa19.86■□□□□ 0.77
TRIM39-209ENST00000428728 OPLAHO14841 1288 aa19.86■□□□□ 0.77
TRIM39-209ENST00000428728 KPNA6O60684 536 aa19.86■□□□□ 0.77
TRIM39-209ENST00000428728 GH1P01241 217 aa19.86■□□□□ 0.77
TRIM39-209ENST00000428728 STOX1Q6ZVD7 989 aa19.86■□□□□ 0.77
TRIM39-209ENST00000428728 IWS1Q96ST2 819 aa19.86■□□□□ 0.77
TRIM39-209ENST00000428728 ZBBXA8MT70 800 aa19.85■□□□□ 0.77
TRIM39-209ENST00000428728 ZBTB5O15062 677 aa19.85■□□□□ 0.77
TRIM39-209ENST00000428728 SGSM2O43147 1006 aa19.85■□□□□ 0.77
TRIM39-209ENST00000428728 MMP3P08254 477 aa19.85■□□□□ 0.77
TRIM39-209ENST00000428728 HSD17B4P51659 736 aa19.85■□□□□ 0.77
TRIM39-209ENST00000428728 ARHGAP1Q07960 439 aa19.85■□□□□ 0.77
TRIM39-209ENST00000428728 GRM4Q14833 912 aa19.85■□□□□ 0.77
TRIM39-209ENST00000428728 WTAPQ15007 396 aa19.85■□□□□ 0.77
TRIM39-209ENST00000428728 NFRKBQ6P4R8 1299 aa19.85■□□□□ 0.77
TRIM39-209ENST00000428728 DEFB128Q7Z7B8 93 aa19.85■□□□□ 0.77
TRIM39-209ENST00000428728 RPUSD2Q8IZ73 545 aaKnown RBP19.85■□□□□ 0.77
TRIM39-209ENST00000428728 NCOA7Q8NI08 942 aa19.85■□□□□ 0.77
TRIM39-209ENST00000428728 MTMR8Q96EF0 704 aa19.85■□□□□ 0.77
TRIM39-209ENST00000428728 PCDHA1Q9Y5I3 950 aa19.85■□□□□ 0.77
TRIM39-209ENST00000428728 NR3C2P08235 984 aa19.84■□□□□ 0.77
TRIM39-209ENST00000428728 MYCLP12524 364 aaPredicted RBP19.84■□□□□ 0.77
TRIM39-209ENST00000428728 HOXA13P31271 388 aaPredicted RBP19.84■□□□□ 0.77
TRIM39-209ENST00000428728 SART3Q15020 963 aaKnown RBP19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms