RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 GRB10Q13322 594 aa10.16□□□□□ -0.78
HDAC1-202ENST00000428704 PLS1Q14651 629 aa10.16□□□□□ -0.78
HDAC1-202ENST00000428704 SBK1Q52WX2 424 aa10.16□□□□□ -0.78
HDAC1-202ENST00000428704 SIAH1Q8IUQ4 282 aa10.16□□□□□ -0.78
HDAC1-202ENST00000428704 FAM126BQ8IXS8 530 aa10.16□□□□□ -0.78
HDAC1-202ENST00000428704 TM6SF1Q9BZW5 370 aa10.16□□□□□ -0.78
HDAC1-202ENST00000428704 IL25Q9H293 177 aa10.16□□□□□ -0.78
HDAC1-202ENST00000428704 HIPK3Q9H422 1215 aa10.16□□□□□ -0.78
HDAC1-202ENST00000428704 UBE2ZQ9H832 354 aaPredicted RBP10.16□□□□□ -0.78
HDAC1-202ENST00000428704 DIAPH3Q9NSV4 1193 aa10.16□□□□□ -0.78
HDAC1-202ENST00000428704 CNPY2Q9Y2B0 182 aa10.16□□□□□ -0.78
HDAC1-202ENST00000428704 ZNF536O15090 1300 aa10.15□□□□□ -0.78
HDAC1-202ENST00000428704 IL9P15248 144 aa10.15□□□□□ -0.78
HDAC1-202ENST00000428704 PRSS12P56730 875 aa10.15□□□□□ -0.78
HDAC1-202ENST00000428704 HIC1Q14526 733 aa10.15□□□□□ -0.78
HDAC1-202ENST00000428704 NECTIN1Q15223 517 aa10.15□□□□□ -0.78
HDAC1-202ENST00000428704 LEXMQ3ZCV2 418 aa10.15□□□□□ -0.78
HDAC1-202ENST00000428704 KIAA1755Q5JYT7 1200 aa10.15□□□□□ -0.78
HDAC1-202ENST00000428704 GIMAP6Q6P9H5 292 aa10.15□□□□□ -0.78
HDAC1-202ENST00000428704 TMEM179Q6ZVK1 233 aa10.15□□□□□ -0.78
HDAC1-202ENST00000428704 RPUSD2Q8IZ73 545 aaKnown RBP10.15□□□□□ -0.78
HDAC1-202ENST00000428704 KLHDC9Q8NEP7 349 aa10.15□□□□□ -0.78
HDAC1-202ENST00000428704 PRSS33Q8NF86 280 aa10.15□□□□□ -0.78
HDAC1-202ENST00000428704 MAP4K1Q92918 833 aa10.15□□□□□ -0.78
HDAC1-202ENST00000428704 GBP4Q96PP9 640 aa10.15□□□□□ -0.78
HDAC1-202ENST00000428704 TINF2Q9BSI4 451 aa10.15□□□□□ -0.78
HDAC1-202ENST00000428704 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.15□□□□□ -0.78
HDAC1-202ENST00000428704 MROH8Q9H579 483 aa10.15□□□□□ -0.78
HDAC1-202ENST00000428704 CABP5Q9NP86 173 aa10.15□□□□□ -0.78
HDAC1-202ENST00000428704 HOXC10Q9NYD6 342 aa10.15□□□□□ -0.78
HDAC1-202ENST00000428704 VPS9D1Q9Y2B5 631 aa10.15□□□□□ -0.78
HDAC1-202ENST00000428704 ZNF236Q9UL36 1845 aa10.14□□□□□ -0.79
HDAC1-202ENST00000428704 UMODL1Q5DID0 1318 aa10.14□□□□□ -0.79
HDAC1-202ENST00000428704 MYADML2A6NDP7 307 aa10.14□□□□□ -0.79
HDAC1-202ENST00000428704 MPHOSPH10O00566 681 aaKnown RBP10.14□□□□□ -0.79
HDAC1-202ENST00000428704 ASGR1P07306 291 aa10.14□□□□□ -0.79
HDAC1-202ENST00000428704 C6orf222P0C671 652 aaPredicted RBP10.14□□□□□ -0.79
HDAC1-202ENST00000428704 ZNF865P0CJ78 1059 aaPredicted RBP10.14□□□□□ -0.79
HDAC1-202ENST00000428704 RASA1P20936 1047 aa10.14□□□□□ -0.79
HDAC1-202ENST00000428704 KCNA5P22460 613 aa10.14□□□□□ -0.79
HDAC1-202ENST00000428704 COG2Q14746 738 aa10.14□□□□□ -0.79
HDAC1-202ENST00000428704 PROX2Q3B8N5 592 aa10.14□□□□□ -0.79
HDAC1-202ENST00000428704 TSGA10IPQ3SY00 556 aa10.14□□□□□ -0.79
HDAC1-202ENST00000428704 CCSAPQ6IQ19 270 aaPredicted RBP10.14□□□□□ -0.79
HDAC1-202ENST00000428704 PTCRAQ6ISU1 281 aaPredicted RBP10.14□□□□□ -0.79
HDAC1-202ENST00000428704 ADGRD1Q6QNK2 874 aa10.14□□□□□ -0.79
HDAC1-202ENST00000428704 CWC27Q6UX04 472 aaKnown RBP10.14□□□□□ -0.79
HDAC1-202ENST00000428704 PCSK9Q8NBP7 692 aaKnown RBP10.14□□□□□ -0.79
HDAC1-202ENST00000428704 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.14□□□□□ -0.79
HDAC1-202ENST00000428704 TNPO1Q92973 898 aaKnown RBP10.14□□□□□ -0.79
HDAC1-202ENST00000428704 TMX3Q96JJ7 454 aa10.14□□□□□ -0.79
HDAC1-202ENST00000428704 SPC25Q9HBM1 224 aa10.14□□□□□ -0.79
HDAC1-202ENST00000428704 FAM184BQ9ULE4 1060 aa10.14□□□□□ -0.79
HDAC1-202ENST00000428704 SNX14Q9Y5W7 946 aa10.14□□□□□ -0.79
HDAC1-202ENST00000428704 A0A0D9SFI3 127 aa10.13□□□□□ -0.79
HDAC1-202ENST00000428704 CD4P01730 458 aa10.13□□□□□ -0.79
HDAC1-202ENST00000428704 PGK2P07205 417 aa10.13□□□□□ -0.79
HDAC1-202ENST00000428704 GNAT2P19087 354 aa10.13□□□□□ -0.79
HDAC1-202ENST00000428704 TAP1Q03518 808 aa10.13□□□□□ -0.79
HDAC1-202ENST00000428704 ICA1Q05084 483 aa10.13□□□□□ -0.79
HDAC1-202ENST00000428704 SKOR2Q2VWA4 1001 aaPredicted RBP10.13□□□□□ -0.79
HDAC1-202ENST00000428704 LRRFIP1Q32MZ4 808 aaKnown RBP10.13□□□□□ -0.79
HDAC1-202ENST00000428704 VPS53Q5VIR6 699 aa10.13□□□□□ -0.79
HDAC1-202ENST00000428704 ERMP1Q7Z2K6 904 aa10.13□□□□□ -0.79
HDAC1-202ENST00000428704 AMOTL1Q8IY63 956 aa10.13□□□□□ -0.79
HDAC1-202ENST00000428704 IFNL3Q8IZI9 196 aa10.13□□□□□ -0.79
HDAC1-202ENST00000428704 CCDC17Q96LX7 622 aa10.13□□□□□ -0.79
HDAC1-202ENST00000428704 FAM227BQ96M60 508 aa10.13□□□□□ -0.79
HDAC1-202ENST00000428704 TTC14Q96N46 770 aa10.13□□□□□ -0.79
HDAC1-202ENST00000428704 MMP19Q99542 508 aa10.13□□□□□ -0.79
HDAC1-202ENST00000428704 TANGO6Q9C0B7 1094 aa10.13□□□□□ -0.79
HDAC1-202ENST00000428704 ALDH8A1Q9H2A2 487 aaPredicted RBP10.13□□□□□ -0.79
HDAC1-202ENST00000428704 CCDC171Q6TFL3 1326 aa10.12□□□□□ -0.79
HDAC1-202ENST00000428704 IGKV6D-41A0A0C4DH26 115 aa10.12□□□□□ -0.79
HDAC1-202ENST00000428704 MINDY4BA8MYZ0 360 aa10.12□□□□□ -0.79
HDAC1-202ENST00000428704 KIF28PB7ZC32 967 aa10.12□□□□□ -0.79
HDAC1-202ENST00000428704 PATL2C9JE40 543 aaKnown RBP10.12□□□□□ -0.79
HDAC1-202ENST00000428704 CST5P28325 142 aaPredicted RBP10.12□□□□□ -0.79
HDAC1-202ENST00000428704 TDO2P48775 406 aa10.12□□□□□ -0.79
HDAC1-202ENST00000428704 KCTD2Q14681 263 aa10.12□□□□□ -0.79
HDAC1-202ENST00000428704 STK11IPQ8N1F8 1099 aa10.12□□□□□ -0.79
HDAC1-202ENST00000428704 MB21D1Q8N884 522 aa10.12□□□□□ -0.79
HDAC1-202ENST00000428704 PRRX2Q99811 253 aa10.12□□□□□ -0.79
HDAC1-202ENST00000428704 LMCD1Q9NZU5 365 aa10.12□□□□□ -0.79
HDAC1-202ENST00000428704 ZHX1Q9UKY1 873 aaPredicted RBP10.12□□□□□ -0.79
HDAC1-202ENST00000428704 TMX2Q9Y320 296 aa10.12□□□□□ -0.79
HDAC1-202ENST00000428704 C5orf42Q9H799 3197 aa10.12□□□□□ -0.79
HDAC1-202ENST00000428704 PLIN4Q96Q06 1357 aa10.12□□□□□ -0.79
HDAC1-202ENST00000428704 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.11□□□□□ -0.79
HDAC1-202ENST00000428704 LPXNO60711 386 aa10.11□□□□□ -0.79
HDAC1-202ENST00000428704 DUSP11O75319 330 aaKnown RBP10.11□□□□□ -0.79
HDAC1-202ENST00000428704 PRDM1O75626 825 aa10.11□□□□□ -0.79
HDAC1-202ENST00000428704 ARHGEF15O94989 841 aa10.11□□□□□ -0.79
HDAC1-202ENST00000428704 APPP05067 770 aa10.11□□□□□ -0.79
HDAC1-202ENST00000428704 PFKMP08237 780 aa10.11□□□□□ -0.79
HDAC1-202ENST00000428704 EEF2P13639 858 aaKnown RBP10.11□□□□□ -0.79
HDAC1-202ENST00000428704 PDIA4P13667 645 aaKnown RBP10.11□□□□□ -0.79
HDAC1-202ENST00000428704 NMIQ13287 307 aaPredicted RBP10.11□□□□□ -0.79
HDAC1-202ENST00000428704 TTLL4Q14679 1199 aa10.11□□□□□ -0.79
HDAC1-202ENST00000428704 PUS10Q3MIT2 529 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms